Gene: Zm00001eb171710
General Information
Structural Information
- Species Zea mays
- Gene Identifier Zm00001eb171710
- Transcript Identifier Zm00001eb171710_T003
- Gene Type Coding gene
- Location 4 : 30856920-30863360 : positive
Gene Family Information
- ID HOM05D001701
- #Genes/#Species 381/98
- Phylogenetic origin
- ID ORTHO05D001628
- #Genes/#Species 379/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Zm00001eb171710_T003
- pid Zm00001eb171710_P003
- uniprot A0A1X7YDY3
- uniprot A0A3L6FA28
- uniprot A0A3L6G636
- uniprot A0A1D6PUR1
- uniprot A0A1D6PUR2
- uniprot A0A1D6PUS3
- uniprot A0A1D6PUR4
- uniprot A0A1D6PUR6
- V4_identifier Zm00001d049442
Descriptions
- Description Zm00001e021648
- Description Polyadenylation and cleavage factor homolog 5
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009911 | ISO | PLAZA Integrative Orthology | positive regulation of flower development | AT4G04885 |
| GO:0006379 | IEA | GOA Database | mRNA cleavage | |
| GO:0006379 | IEA | InterPro | mRNA cleavage | |
| GO:0006378 | IBA IEA | GOA Database | mRNA polyadenylation | |
| GO:0006378 | IEA | InterPro | mRNA polyadenylation | |
| GO:0006369 | IBA IEA | GOA Database | termination of RNA polymerase II transcription | |
| GO:0006369 | IEA | InterPro | termination of RNA polymerase II transcription | |
| GO:0006397 | IEA | GOA Database | mRNA processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | IBA IEA | GOA Database | mRNA binding | |
| GO:0003729 | IEA | InterPro | mRNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G04885 |
| GO:0000993 | IBA IEA | GOA Database | RNA polymerase II complex binding | |
| GO:0000993 | IEA | InterPro | RNA polymerase II complex binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT4G04885 |
| GO:0005849 | IBA | GOA Database | mRNA cleavage factor complex | |
| GO:0005737 | IBA | GOA Database | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.3.1.5.2 | RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage Factor II (CF-IIm) complex.component Pcf11 |