Gene: Carub.0002s1252
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0002s1252
- Transcript Identifier Carub.0002s1252.1
- Gene Type Coding gene
- Location scaffold_2 : 7980193-7981470 : negative
Gene Family Information
- ID HOM05D001701
- #Genes/#Species 381/98
- Phylogenetic origin
- ID ORTHO05D001628
- #Genes/#Species 379/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0002s1252.v1.1
- pacid 39243837
- synonym Carubv10020347m.g
Descriptions
- Description K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006369 | IEA | InterPro | termination of RNA polymerase II transcription | |
| GO:0006378 | IEA | InterPro | mRNA polyadenylation | |
| GO:0006379 | IEA | InterPro | mRNA cleavage |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000993 | IEA | InterPro | RNA polymerase II complex binding | |
| GO:0003729 | IEA | InterPro | mRNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G43620 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR045154 | Protein PCF11-like |
| Mapman id | Description |
|---|---|
| 16.3.1.5.2 | RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage Factor II (CF-IIm) complex.component Pcf11 |