Gene: Solyc09g009120.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g009120.4
  • Transcript Identifier Solyc09g009120.4.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 2494453-2501864 : positive

Gene Family Information

  • ID HOM05D001701
  • #Genes/#Species 381/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g009120.4.1
  • uniprot A0A3Q7HZ26
  • gene_id Solyc09g009120

Descriptions

  • Description Polyadenylation and cleavage factor-like protein 4 (AHRD V3.3 *-* A0A1J3JME1_NOCCA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006369
IBA
IEA
GOA Databasetermination of RNA polymerase II transcription
GO:0006369
IEA
InterProtermination of RNA polymerase II transcription
GO:0006378
IBA
IEA
GOA DatabasemRNA polyadenylation
GO:0006378
IEA
InterPromRNA polyadenylation
GO:0006379
IEA
GOA DatabasemRNA cleavage
GO:0006379
IEA
InterPromRNA cleavage
GO:0006397
IEA
GOA DatabasemRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000993
IBA
IEA
GOA DatabaseRNA polymerase II complex binding
GO:0000993
IEA
InterProRNA polymerase II complex binding
GO:0003729
IBA
IEA
GOA DatabasemRNA binding
GO:0003729
IEA
InterPromRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005849
IBA
GOA DatabasemRNA cleavage factor complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045154 Protein PCF11-like
IPR008942 ENTH/VHS
IPR006569 CID domain
Mapman id Description
16.3.1.5.2 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage Factor II (CF-IIm) complex.component Pcf11