Gene: COL.COLO4_28684

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_28684
  • Transcript Identifier COL.rna27402
  • Gene Type Coding gene
  • Location AWUE01020023.1 : 104709-105638 : positive

Gene Family Information

  • ID HOM05D001701
  • #Genes/#Species 381/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna27402
  • GenBank OMO70234.1
  • id gene28656
  • gene_name COLO4_28684
  • uniprot A0A1R3HIZ9

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006369
IEA
GOA Databasetermination of RNA polymerase II transcription
GO:0006369
IEA
InterProtermination of RNA polymerase II transcription
GO:0006378
IEA
GOA DatabasemRNA polyadenylation
GO:0006378
IEA
InterPromRNA polyadenylation
GO:0006379
IEA
GOA DatabasemRNA cleavage
GO:0006379
IEA
InterPromRNA cleavage
GO:0006397
ISO
PLAZA Integrative OrthologymRNA processing AT4G04885
GO:0009911
ISO
PLAZA Integrative Orthologypositive regulation of flower development AT4G04885

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0003729
IEA
InterPromRNA binding
GO:0000993
IEA
GOA DatabaseRNA polymerase II complex binding
GO:0000993
IEA
InterProRNA polymerase II complex binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G04885

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G04885
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G04885

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045154 Protein PCF11-like
Mapman id Description
16.3.1.5.2 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage Factor II (CF-IIm) complex.component Pcf11