Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p11280 Brassica napus
A07p13770 Brassica napus
A07p13780 Brassica napus
A08p28000 Brassica napus
A09p41000 Brassica napus
A10p10620 Brassica napus
Aa31LG3G9350 Aethionema arabicum
Aa31LG7G7690 Aethionema arabicum
Aa31LG7G7700 Aethionema arabicum
Aa31LG7G7710 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.81 Anthoceros agrestis
Actinidia01709 Actinidia chinensis
Actinidia08171 Actinidia chinensis
Actinidia08635 Actinidia chinensis
Actinidia15035 Actinidia chinensis
Ah.01g013570 Amaranthus hybridus
Ah.03g132540 Amaranthus hybridus
Ah.07g205930 Amaranthus hybridus
AL1G37570 Arabidopsis lyrata
AL2G29610 Arabidopsis lyrata
AL8G27770 Arabidopsis lyrata
Aqoxy3G00968 Aquilegia oxysepala
Aqoxy3G03026 Aquilegia oxysepala
Aqoxy7G00117 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.397P62 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3EVA1Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4VI1X3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7609CJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BKDZ2C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CD11VG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DY91G5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GHL8IH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IUZX85 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WC4CIS Arachis hypogaea
AT1G23820 Arabidopsis thaliana
AT1G70310 Arabidopsis thaliana
AT5G53120 Arabidopsis thaliana
ATR0188G012 Amborella trichopoda
ATR0691G088 Amborella trichopoda
ATR0691G300 Amborella trichopoda
ATR0751G162 Amborella trichopoda
Atru.chr1.143 Acer truncatum
Atru.chr9.2440_Atru.chr9.2441 Acer truncatum
AUR62005360 Chenopodium quinoa
AUR62006132 Chenopodium quinoa
AUR62009129 Chenopodium quinoa
AUR62014015 Chenopodium quinoa
AUR62019357 Chenopodium quinoa
AUR62039126 Chenopodium quinoa
AUR62044310 Chenopodium quinoa
BcaB03g11956 Brassica carinata
BcaB05g22013 Brassica carinata
BcaB07g32356 Brassica carinata
BcaB08g35671 Brassica carinata
BcaC03g14453 Brassica carinata
BcaC04g20503 Brassica carinata
BcaC05g26289 Brassica carinata
BcaC06g35053 Brassica carinata
BcaC06g35054 Brassica carinata
BcaC07g39216 Brassica carinata
BcaC07g39217 Brassica carinata
BcaC07g39218 Brassica carinata
BcaNung02491 Brassica carinata
BolC2t08009H Brassica oleracea
BolC5t30998H Brassica oleracea
BolC7t42545H Brassica oleracea
BolC7t42546H Brassica oleracea
BolC7t42547H Brassica oleracea
BolC8t49859H Brassica oleracea
BolC9t57158H Brassica oleracea
BraA02t06190Z Brassica rapa
BraA07t29126Z Brassica rapa
BraA07t29127Z Brassica rapa
BraA08t34730Z Brassica rapa
BraA09t39594Z Brassica rapa
BraA10t43143Z Brassica rapa
C02p18640 Brassica napus
C05p22990 Brassica napus
C05p43420 Brassica napus
C07p20240 Brassica napus
C07p20250 Brassica napus
C08p22130 Brassica napus
C09p42820 Brassica napus
C09p74510 Brassica napus
CAN.G108.44 Capsicum annuum
CAN.G1234.1 Capsicum annuum
CAN.G378.1 Capsicum annuum
CAN.G60.11 Capsicum annuum
CAN.G615.4 Capsicum annuum
CANSAT01G2608 Cannabis sativa
CANSAT21G1579 Cannabis sativa
CARHR024220 Cardamine hirsuta
CARHR063450 Cardamine hirsuta
CARHR063460 Cardamine hirsuta
CARHR266150 Cardamine hirsuta
Carub.0001s2332 Capsella rubella
Carub.0002s1699 Capsella rubella
Carub.0008s1332 Capsella rubella
Ca_04602_v3 Cicer arietinum L.
Ca_12692_v3 Cicer arietinum L.
Ca_16198_v3 Cicer arietinum L.
Ca_16689_v3 Cicer arietinum L.
Ca_22740_v3 Cicer arietinum L.
Ca_28611_v3 Cicer arietinum L.
Ca_30932_v3 Cicer arietinum L.
CBR_g36980 Chara braunii
CBR_g36983 Chara braunii
CBR_g45375 Chara braunii
Cc02_g01740 Coffea canephora
Cc11_g14530 Coffea canephora
CDE01G0244 Ceratophyllum demersum
CDE02G2940 Ceratophyllum demersum
CDE10G0118 Ceratophyllum demersum
CDE10G1134 Ceratophyllum demersum
Cfa009106 Carpinus fangiana
Cfa019093 Carpinus fangiana
Cfa026145 Carpinus fangiana
Ciclev10006705m.g Citrus clementina
Ciclev10023140m.g Citrus clementina
Ciclev10024359m.g Citrus clementina
Ciclev10031988m.g Citrus clementina
CiPaw.03G231700 Carya illinoinensis
CiPaw.05G146600 Carya illinoinensis
CiPaw.05G255900 Carya illinoinensis
CiPaw.06G009600 Carya illinoinensis
CiPaw.06G074400 Carya illinoinensis
CiPaw.11G028900 Carya illinoinensis
CiPaw.12G025100 Carya illinoinensis
ClCG01G000500 Citrullus lanatus
ClCG01G013010 Citrullus lanatus
ClCG05G008810 Citrullus lanatus
ClCG05G025220 Citrullus lanatus
ClCG06G016890 Citrullus lanatus
COL.COLO4_04782 Corchorus olitorius
COL.COLO4_34056 Corchorus olitorius
COL.COLO4_36977 Corchorus olitorius
COL.COLO4_38239 Corchorus olitorius
Cpa.g.sc1551.1 Carica papaya
Cre12.g558450 Chlamydomonas reinhardtii
CsaV3_1G001620 Cucumis sativus L.
CsaV3_1G008360 Cucumis sativus L.
CsaV3_1G008370 Cucumis sativus L.
CsaV3_3G028000 Cucumis sativus L.
CsaV3_5G000580 Cucumis sativus L.
CsaV3_5G031670 Cucumis sativus L.
CSS0000443 Camellia sinensis var. sinensis
CSS0004549 Camellia sinensis var. sinensis
CSS0006620 Camellia sinensis var. sinensis
CSS0007183 Camellia sinensis var. sinensis
CSS0016424 Camellia sinensis var. sinensis
CSS0029962 Camellia sinensis var. sinensis
CSS0032849 Camellia sinensis var. sinensis
CSS0044237 Camellia sinensis var. sinensis
DCAR_010607 Daucus carota
DCAR_024141 Daucus carota
DCAR_031094 Daucus carota
Dinv05479 Davidia involucrata
Dinv15315 Davidia involucrata
Dinv24873 Davidia involucrata
Dinv35319 Davidia involucrata
Duzib068G0555 Durio zibethinus
Duzib068G0827 Durio zibethinus
Duzib205G0821 Durio zibethinus
Duzib205G1619 Durio zibethinus
Duzib248G0037 Durio zibethinus
Duzib268G1500 Durio zibethinus
ECA199G0008 Erigeron canadensis
ECA232G0869 Erigeron canadensis
ECA233G0891 Erigeron canadensis
ECA233G3495 Erigeron canadensis
EL10Ac3g05325 Beta vulgaris
EL10Ac6g13656 Beta vulgaris
Eucgr.A01487 Eucalyptus grandis
Eucgr.B00355 Eucalyptus grandis
Eucgr.C00527 Eucalyptus grandis
Eucgr.H02622 Eucalyptus grandis
FAN01G0681 Fragaria x ananassa
FAN03G2740 Fragaria x ananassa
FAN05G0635 Fragaria x ananassa
FAN06G0038 Fragaria x ananassa
FAN06G0578 Fragaria x ananassa
FAN06G1996 Fragaria x ananassa
FAN06G4671 Fragaria x ananassa
FAN07G0982 Fragaria x ananassa
FAN08G1214 Fragaria x ananassa
FAN10G2653 Fragaria x ananassa
FAN10G2745 Fragaria x ananassa
FAN12G0262 Fragaria x ananassa
FAN12G2107 Fragaria x ananassa
FAN13G0054 Fragaria x ananassa
FAN17G0882 Fragaria x ananassa
FAN18G1385 Fragaria x ananassa
FAN18G3478 Fragaria x ananassa
FAN22G1376 Fragaria x ananassa
FvH4_4g34680 Fragaria vesca
FvH4_5g05120 Fragaria vesca
FvH4_7g31820 Fragaria vesca
FvH4_7g31860 Fragaria vesca
Glyma.01G031700 Glycine max
Glyma.02G033900 Glycine max
Glyma.04G180500 Glycine max
Glyma.04G237300 Glycine max
Glyma.05G034900 Glycine max
Glyma.05G036300 Glycine max
Glyma.06G126700 Glycine max
Glyma.06G184100 Glycine max
Glyma.08G288100 Glycine max
Glyma.17G091100 Glycine max
Glyma.17G092400 Glycine max
Glyma.18G137100 Glycine max
Gohir.A03G140700 Gossypium hirsutum
Gohir.A07G060400 Gossypium hirsutum
Gohir.A08G096200 Gossypium hirsutum
Gohir.A08G195550 Gossypium hirsutum
Gohir.A12G251000 Gossypium hirsutum
Gohir.D02G163500 Gossypium hirsutum
Gohir.D07G065100 Gossypium hirsutum
Gohir.D08G103400 Gossypium hirsutum
Gohir.D12G251800 Gossypium hirsutum
Gorai.001G068600 Gossypium raimondii
Gorai.004G115100 Gossypium raimondii
Gorai.005G183500 Gossypium raimondii
Gorai.008G269900 Gossypium raimondii
GSVIVG01007787001 Vitis vinifera
GSVIVG01020222001 Vitis vinifera
GSVIVG01028700001 Vitis vinifera
HanXRQChr08g0208841 Helianthus annuus
HanXRQChr09g0252991 Helianthus annuus
HanXRQChr12g0371451 Helianthus annuus
HanXRQChr12g0383441 Helianthus annuus
HanXRQChr13g0393111 Helianthus annuus
HanXRQChr17g0570251 Helianthus annuus
Haze_00159 Corylus avellana
Haze_07491 Corylus avellana
Haze_12143 Corylus avellana
Haze_27347 Corylus avellana
Hma1.2p1_0160F.1_g070720 Hydrangea macrophylla
Hma1.2p1_0176F.1_g077700 Hydrangea macrophylla
Hma1.2p1_0538F.1_g174440 Hydrangea macrophylla
Hma1.2p1_0867F.1_g230310 Hydrangea macrophylla
HPP92_006485 Vanilla planifolia
HPP92_006486 Vanilla planifolia
HPP92_021641 Vanilla planifolia
HPP92_021647 Vanilla planifolia
HPP92_021729 Vanilla planifolia
HPP92_027053 Vanilla planifolia
HPP92_027412 Vanilla planifolia
Hund05983 Selenicereus undatus
Hund11677 Selenicereus undatus
Hund25339 Selenicereus undatus
Lalb_Chr05g0216941 Lupinus albus
Lalb_Chr05g0227831 Lupinus albus
Lalb_Chr09g0326391 Lupinus albus
Lalb_Chr11g0066701 Lupinus albus
Lalb_Chr13g0297871 Lupinus albus
Lalb_Chr16g0382321 Lupinus albus
Lj1C1014G8 Lonicera japonica
Lj1g0001257 Lotus japonicus
Lj2g0000085 Lotus japonicus
Lj3C1051T11 Lonicera japonica
Lj4g0001598 Lotus japonicus
Lj4g0025645 Lotus japonicus
Lj4g0027516 Lotus japonicus
Lj6C804T17 Lonicera japonica
Lsat_1_v5_gn_2_135921 Lactuca sativa
Lsat_1_v5_gn_3_87780 Lactuca sativa
Lsat_1_v5_gn_4_7021 Lactuca sativa
Lsat_1_v5_gn_8_158360 Lactuca sativa
Lsat_1_v5_gn_8_5021 Lactuca sativa
Lsat_1_v5_gn_9_58061 Lactuca sativa
Manes.06G103200 Manihot esculenta
Manes.06G158700 Manihot esculenta
Manes.12G030300 Manihot esculenta
Manes.13G031400 Manihot esculenta
Manes.14G007244 Manihot esculenta
Manes.14G067700 Manihot esculenta
Mapoly0038s0069 Marchantia polymorpha
Mapoly0116s0055 Marchantia polymorpha
MBI07_g23929_MAGBIO Magnolia biondii
MBI07_g37610_MAGBIO Magnolia biondii
MBI14_g43246_MAGBIO Magnolia biondii
MCO02G091 Micromonas commoda
MCO09G226 Micromonas commoda
MD01G1221000 Malus domestica
MD01G1221200 Malus domestica
MD06G1177500 Malus domestica
MD07G1291100 Malus domestica
MD07G1292400 Malus domestica
MD13G1090400 Malus domestica
MD14G1183600 Malus domestica
MD16G1091000 Malus domestica
Medtr0044s0050 Medicago truncatula
Medtr1g028360 Medicago truncatula
Medtr3g078190 Medicago truncatula
Medtr3g091090 Medicago truncatula
Medtr5g034470 Medicago truncatula
Medtr8g063940 Medicago truncatula
MELO3C002252.2 Cucumis melo
MELO3C005877.2 Cucumis melo
MELO3C008477.2 Cucumis melo
MELO3C012007.2 Cucumis melo
MELO3C017103.2 Cucumis melo
Migut.E00155 Erythranthe guttata
Migut.F00231 Erythranthe guttata
Migut.L01398 Erythranthe guttata
MSTRG.2391 Avicennia marina
MSTRG.27038 Avicennia marina
MSTRG.603 Avicennia marina
Nitab4.5_0000013g0380 Nicotiana tabacum
Nitab4.5_0000013g0390 Nicotiana tabacum
Nitab4.5_0000034g0230 Nicotiana tabacum
Nitab4.5_0000060g0100 Nicotiana tabacum
Nitab4.5_0000113g0030 Nicotiana tabacum
Nitab4.5_0000714g0010 Nicotiana tabacum
Nitab4.5_0003284g0010 Nicotiana tabacum
Nitab4.5_0003284g0040 Nicotiana tabacum
Nitab4.5_0003646g0010 Nicotiana tabacum
Nitab4.5_0004700g0060 Nicotiana tabacum
Nitab4.5_0010954g0020 Nicotiana tabacum
Nitab4.5_0011232g0010 Nicotiana tabacum
Nitab4.5_0012491g0010 Nicotiana tabacum
Nn1g01881 Nelumbo nucifera
Nn4g22824 Nelumbo nucifera
Oeu001676.1 Olea europaea
Oeu028911.1 Olea europaea
Oeu036105.1 Olea europaea
Oeu037103.2 Olea europaea
Os02g0254700 Oryza sativa ssp. japonica
Os06g0528600 Oryza sativa ssp. japonica
Os07g0408700 Oryza sativa ssp. japonica
Peaxi162Scf00020g00055 Petunia axillaris
Peaxi162Scf00075g01328 Petunia axillaris
Peaxi162Scf00097g00233 Petunia axillaris
Peaxi162Scf00198g00014 Petunia axillaris
Peaxi162Scf00393g00010 Petunia axillaris
Peaxi162Scf00442g00082 Petunia axillaris
Peaxi162Scf00579g00211 Petunia axillaris
Peaxi162Scf00589g00418 Petunia axillaris
PGR042G2191 Punica granatum
PGR044G1464 Punica granatum
PGR083G2313 Punica granatum
PGR119G2185 Punica granatum
PGSC0003DMG400004111 Solanum tuberosum
PGSC0003DMG400009077 Solanum tuberosum
PGSC0003DMG400024232 Solanum tuberosum
PGSC0003DMG400036131 Solanum tuberosum
PGSC0003DMG400037026 Solanum tuberosum
Phvul.002G072200 Phaseolus vulgaris
Phvul.003G052600 Phaseolus vulgaris
Phvul.003G199000 Phaseolus vulgaris
Phvul.009G054800 Phaseolus vulgaris
Potri.008G147200 Populus trichocarpa
Potri.010G094600 Populus trichocarpa
Potri.012G002600 Populus trichocarpa
Potri.015G018900 Populus trichocarpa
Pp3c14_14230 Physcomitrium patens
Pp3c17_5630 Physcomitrium patens
Pp3c1_32030 Physcomitrium patens
Pp3c2_2980 Physcomitrium patens
PRCOL_00005760 Prasinoderma coloniale
Prupe.1G255300 Prunus persica
Prupe.2G312400 Prunus persica
Prupe.5G176100 Prunus persica
Prupe.5G176200 Prunus persica
Psat0s1463g0080 Pisum sativum
Psat2g103040 Pisum sativum
Psat5g077760 Pisum sativum
Psat5g113480 Pisum sativum
PSO017G2065 Papaver somniferum
PSO063G5410 Papaver somniferum
PSO063G6314 Papaver somniferum
PSO170G6896 Papaver somniferum
PSO384G4018 Papaver somniferum
PSO478G2511 Papaver somniferum
PSO675G1973 Papaver somniferum
PSO728G0001 Papaver somniferum
QL03p061719 Quercus lobata
QL09p010247 Quercus lobata
QL10p012202 Quercus lobata
RcHm_v2.0_Chr1g0381051 Rosa chinensis
RcHm_v2.0_Chr4g0444031 Rosa chinensis
RcHm_v2.0_Chr7g0193881 Rosa chinensis
Rhsim03G0201100 Rhododendron simsii
Rhsim12G0047600 Rhododendron simsii
Sabra08G0112000 Salix brachista
Sabra10G0066900 Salix brachista
Sabra12G0018900 Salix brachista
SalBow2G0312 Salvia bowleyana
SalBow4G0680 Salvia bowleyana
SalBow4G3105 Salvia bowleyana
Sc04g0001900 Simmondsia chinensis
Sc04g0009090 Simmondsia chinensis
Sc19g0000900 Simmondsia chinensis
Sed0001765 Sechium edule
Sed0002842 Sechium edule
Sed0009588 Sechium edule
Sed0016425 Sechium edule
Sed0020667 Sechium edule
Sed0022756 Sechium edule
SGA_v2.0_scaffold2010G54068 Striga asiatica
SGA_v2.0_scaffold236G43736 Striga asiatica
SGA_v2.0_scaffold44G16781 Striga asiatica
SGA_v2.0_scaffold63G21694 Striga asiatica
SHI17642 Sapria himalayana
SHI17646 Sapria himalayana
SMO144G0095 Selaginella moellendorffii
SMO356G0544 Selaginella moellendorffii
Solyc03g007240.3 Solanum lycopersicum
Solyc04g026030.3 Solanum lycopersicum
Solyc05g005710.4 Solanum lycopersicum
Solyc06g053510.3 Solanum lycopersicum
Solyc06g053520.4 Solanum lycopersicum
Solyc08g014310.3 Solanum lycopersicum
Sopen03g003220 Solanum pennellii
Sopen04g013830 Solanum pennellii
Sopen05g001710 Solanum pennellii
Sopen06g018600 Solanum pennellii
Sopen06g018610 Solanum pennellii
Sopen08g005230 Solanum pennellii
Sp1g21190 Schrenkiella parvula
Sp5g25440 Schrenkiella parvula
Sp6g15290 Schrenkiella parvula
TAR365G0348 Trochodendron aralioides
TAR365G0499 Trochodendron aralioides
TAR365G1169 Trochodendron aralioides
TAR371G0895 Trochodendron aralioides
TAR375G0410 Trochodendron aralioides
TAR375G0456 Trochodendron aralioides
TAR622G0365 Trochodendron aralioides
TAR622G1069 Trochodendron aralioides
TAR629G0878 Trochodendron aralioides
TAR629G2073 Trochodendron aralioides
TAR636G0118 Trochodendron aralioides
THA.LOC104800298 Tarenaya hassleriana
THA.LOC104822135 Tarenaya hassleriana
THA.LOC104822962 Tarenaya hassleriana
Thecc.02G244600 Theobroma cacao
Thecc.03G008800 Theobroma cacao
Thecc.03G008900 Theobroma cacao
Thecc.03G009100 Theobroma cacao
Thecc.03G194600 Theobroma cacao
Thecc.04G007300 Theobroma cacao
Thecc.10G102900 Theobroma cacao
Thhalv10007822m.g Eutrema salsugineum
Thhalv10013929m.g Eutrema salsugineum
TPR.G13584 Trifolium pratense
TPR.G17289 Trifolium pratense
TPR.G29249 Trifolium pratense
TPR.G33298 Trifolium pratense
TPR.G33335 Trifolium pratense
TPR.G34959 Trifolium pratense
TPR.G7467 Trifolium pratense
TPR.G9478 Trifolium pratense
TWI14G0128 Tripterygium wilfordii
TWI18G0882 Tripterygium wilfordii
TWI36G0170 Tripterygium wilfordii
TWI36G0723 Tripterygium wilfordii
TWI39G0151 Tripterygium wilfordii
unitig_22.g6468 Utricularia gibba
unitig_25.g30563 Utricularia gibba
unitig_46.g18815 Utricularia gibba
unitig_8.g3170 Utricularia gibba
vmacro01185 Vaccinium macrocarpon
vmacro06553 Vaccinium macrocarpon
VMungo0251G3515 Vigna mungo
VMungo1215G1029 Vigna mungo
VMungo1215G3230 Vigna mungo
VMungo1309G0718 Vigna mungo
VMungo1309G2725 Vigna mungo
Zm00001eb094730 Zea mays
Zm00001eb204260 Zea mays
Zm00001eb230230 Zea mays
Zm00001eb305710 Zea mays
Zm00001eb383120 Zea mays

User provided reference genes

Program Settings