Gene: SGA_v2.0_scaffold44G16781
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold44G16781
- Transcript Identifier SGA_v2.0_scaffold44T16781
- Gene Type Coding gene
- Location scaffold44 : 1315740-1324317 : negative
Gene Family Information
- ID HOM05D001322
- #Genes/#Species 474/99
- Phylogenetic origin
- ID ORTHO05D010173
- #Genes/#Species 74/59
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product Spermidine synthase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006096 | IEA | InterPro | glycolytic process | |
| GO:0006596 | ISO | PLAZA Integrative Orthology | polyamine biosynthetic process | AT5G53120 |
| GO:0006597 | ISO | PLAZA Integrative Orthology | spermine biosynthetic process | AT5G53120 |
| GO:0006595 | ISO | PLAZA Homology (enrichment) | polyamine metabolic process | HOM05D001322 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT5G53120 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0000287 | IEA | InterPro | magnesium ion binding | |
| GO:0004743 | IEA | InterPro | pyruvate kinase activity | |
| GO:0030955 | IEA | InterPro | potassium ion binding | |
| GO:0004766 | ISO | PLAZA Integrative Orthology | spermidine synthase activity | AT5G53120 |
| GO:0016768 | ISO | PLAZA Integrative Orthology | spermine synthase activity | AT5G53120 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G53120 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G53120 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011037 | Pyruvate kinase-like, insert domain superfamily |
| IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase |
| IPR040442 | Pyruvate kinase-like domain superfamily |
| IPR015813 | Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily |
| IPR001697 | Pyruvate kinase |
| IPR015806 | Pyruvate kinase, insert domain superfamily |
| IPR035246 | Spermidine synthase, tetramerisation domain |
| IPR015793 | Pyruvate kinase, barrel |
| Mapman id | Description |
|---|---|
| 8.2.3 | Polyamine metabolism.spermidine biosynthesis.spermine synthase |