Gene: Ah.07g205930
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.07g205930
- Transcript Identifier Ah.07g205930-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_7 : 20629673-20654693 : positive
Gene Family Information
- ID HOM05D001322
- #Genes/#Species 474/99
- Phylogenetic origin
- ID ORTHO05D001301
- #Genes/#Species 437/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Ah.07g205930-v1.1.a1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008295 | ISO | PLAZA Integrative Orthology | spermidine biosynthetic process | AT1G23820 |
| GO:0009710 | ISO | PLAZA Integrative Orthology | tropane alkaloid biosynthetic process | Solyc06g053510.3 |
| GO:0006596 | ISO | PLAZA Integrative Orthology | polyamine biosynthetic process | AT5G53120 |
| GO:0006597 | ISO | PLAZA Integrative Orthology | spermine biosynthetic process | AT5G53120 |
| GO:0006595 | ISO | PLAZA Homology (enrichment) | polyamine metabolic process | HOM05D001322 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT5G53120 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016791 | IEA | InterPro | phosphatase activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0004766 | ISO | PLAZA Integrative Orthology | spermidine synthase activity | AT5G53120 |
| GO:0016768 | ISO | PLAZA Integrative Orthology | spermine synthase activity | AT5G53120 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G53120 |
| GO:0030750 | ISO | PLAZA Integrative Orthology | putrescine N-methyltransferase activity | Solyc06g053510.3 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G53120 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001932 | PPM-type phosphatase domain |
| IPR001045 | Spermidine/spermine synthases |
| IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase |
| IPR035246 | Spermidine synthase, tetramerisation domain |
| IPR037163 | Spermidine synthase, tetramerisation domain superfamily |
| IPR036457 | PPM-type phosphatase domain superfamily |
| Mapman id | Description |
|---|---|
| 8.2.3 | Polyamine metabolism.spermidine biosynthesis.spermine synthase |