Gene: Carub.0008s1332

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s1332
  • Transcript Identifier Carub.0008s1332.1
  • Gene Type Coding gene
  • Location scaffold_8 : 7616985-7619236 : positive

Gene Family Information

  • ID HOM05D001322
  • #Genes/#Species 474/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s1332.v1.1
  • pacid 39252841
  • synonym Carubv10026659m.g

Descriptions

  • Description 2.5.1.16//2.5.1.22 - Spermidine synthase / Putrescine aminopropyltransferase // Spermine synthase / Spermidine aminopropyltransferase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006595
IEA
InterPropolyamine metabolic process
GO:0006596
ISO
PLAZA Integrative Orthologypolyamine biosynthetic process AT5G53120
GO:0006597
ISO
PLAZA Integrative Orthologyspermine biosynthetic process AT5G53120
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT5G53120

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0004766
ISO
PLAZA Integrative Orthologyspermidine synthase activity AT5G53120
GO:0016768
ISO
PLAZA Integrative Orthologyspermine synthase activity AT5G53120
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G53120

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G53120

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035246 Spermidine synthase, tetramerisation domain
IPR001045 Spermidine/spermine synthases
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR030668 Spermidine/spermine synthase, eukaryotes
IPR037163 Spermidine synthase, tetramerisation domain superfamily
Mapman id Description
8.2.3 Polyamine metabolism.spermidine biosynthesis.spermine synthase