Gene: Solyc06g053520.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g053520.4
  • Transcript Identifier Solyc06g053520.4.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 34103860-34108257 : positive

Gene Family Information

  • ID HOM05D001322
  • #Genes/#Species 474/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g053520.4.1
  • uniprot A0A3Q7HPA9
  • gene_id Solyc06g053520

Descriptions

  • Description Spermidine synthase (AHRD V3.3 *** A0A2G3B8N0_CAPCH),Pfam:PF01564
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006596
IBA
IEA
GOA Databasepolyamine biosynthetic process
GO:0008295
ISO
PLAZA Integrative Orthologyspermidine biosynthetic process AT1G23820
GO:0006595
ISO
PLAZA Homology (enrichment)polyamine metabolic process HOM05D001322

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0004766
IBA
GOA Databasespermidine synthase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G23820

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G70310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR035246 Spermidine synthase, tetramerisation domain
IPR037163 Spermidine synthase, tetramerisation domain superfamily
IPR001045 Spermidine/spermine synthases
Mapman id Description
50.2.5 Enzyme classification.EC_2 transferases.EC_2.5 transferase transferring alkyl or aryl group, other than methyl group