Gene: Sopen06g018610
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen06g018610
- Transcript Identifier Sopen06g018610.1
- Gene Type Coding gene
- Location Spenn-ch06 : 45884761-45895131 : positive
Gene Family Information
- ID HOM05D001322
- #Genes/#Species 474/99
- Phylogenetic origin
- ID ORTHO05D001301
- #Genes/#Species 437/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen06g018610.1
Descriptions
- Description Spermidine synthase. | spermidine synthase 2 (SPDS2) | FUNCTIONS IN: spermidine synthase activity | INVOLVED IN: spermidine biosynthetic process | LOCATED IN: plasma membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Spermine synthase | BEST Arabidopsis thaliana protein match is: spermidine synthase 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008295 | ISO | PLAZA Integrative Orthology | spermidine biosynthetic process | AT1G23820 |
| GO:0006595 | ISO | PLAZA Homology (enrichment) | polyamine metabolic process | HOM05D001322 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0004766 | ISO | PLAZA Integrative Orthology | spermidine synthase activity | AT1G23820 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G23820 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G70310 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 50.2.5 | Enzyme classification.EC_2 transferases.EC_2.5 transferase transferring alkyl or aryl group, other than methyl group |