Gene: COL.COLO4_34056

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_34056
  • Transcript Identifier COL.rna32751
  • Gene Type Coding gene
  • Location AWUE01022054.1 : 52482-55069 : positive

Gene Family Information

  • ID HOM05D001322
  • #Genes/#Species 474/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna32751
  • GenBank OMO59806.1
  • id gene34028
  • gene_name COLO4_34056
  • uniprot A0A1R3GP23

Descriptions

  • Description Spermidine/spermine synthases family
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006596
IEA
GOA Databasepolyamine biosynthetic process
GO:0008295
ISO
PLAZA Integrative Orthologyspermidine biosynthetic process AT1G23820
GO:0009710
ISO
PLAZA Integrative Orthologytropane alkaloid biosynthetic process Solyc06g053510.3
GO:0006595
ISO
PLAZA Homology (enrichment)polyamine metabolic process HOM05D001322

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016740
IEA
GOA Databasetransferase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0004766
ISO
PLAZA Integrative Orthologyspermidine synthase activity AT1G23820
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G23820
GO:0030750
ISO
PLAZA Integrative Orthologyputrescine N-methyltransferase activity Solyc06g053510.3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G70310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035246 Spermidine synthase, tetramerisation domain
IPR001045 Spermidine/spermine synthases
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR037163 Spermidine synthase, tetramerisation domain superfamily
Mapman id Description
50.2.5 Enzyme classification.EC_2 transferases.EC_2.5 transferase transferring alkyl or aryl group, other than methyl group