Gene: Pp3c2_2980

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c2_2980
  • Transcript Identifier Pp3c2_2980V3.1
  • Gene Type Coding gene
  • Location Chr02 : 1954803-1958911 : positive

Gene Family Information

  • ID HOM05D001322
  • #Genes/#Species 474/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c2_2980V3.1
  • pacid 32934085
  • alias Phypa_201920
  • alias Phpat.002G013200
  • alias Pp1s7_73V6
  • uniprot A9RFU9

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT5G53120
GO:0006597
ISO
PLAZA Integrative Orthologyspermine biosynthetic process AT5G53120
GO:0009710
ISO
PLAZA Integrative Orthologytropane alkaloid biosynthetic process Solyc06g053510.3
GO:0008295
ISO
PLAZA Integrative Orthologyspermidine biosynthetic process AT1G23820
GO:0006596
IBA
IEA
GOA Databasepolyamine biosynthetic process
GO:0006595
IEA
GOA Databasepolyamine metabolic process
GO:0006595
IEA
InterPropolyamine metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016768
ISO
PLAZA Integrative Orthologyspermine synthase activity AT5G53120
GO:0030750
ISO
PLAZA Integrative Orthologyputrescine N-methyltransferase activity Solyc06g053510.3
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G53120
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0004766
IBA
GOA Databasespermidine synthase activity
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G70310
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G53120

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035246 Spermidine synthase, tetramerisation domain
IPR037163 Spermidine synthase, tetramerisation domain superfamily
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR001045 Spermidine/spermine synthases
IPR030668 Spermidine/spermine synthase, eukaryotes
Mapman id Description
8.2.2 Polyamine metabolism.spermidine biosynthesis.spermidine synthase