Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p08390 Brassica napus
A05p17360 Brassica napus
A05p36190 Brassica napus
A05p36210 Brassica napus
A05p36230 Brassica napus
A05p36240 Brassica napus
A05p36250 Brassica napus
A05p36270 Brassica napus
A06p00070 Brassica napus
A07p41670 Brassica napus
A08p36660 Brassica napus
A09p67700 Brassica napus
A10p03310 Brassica napus
Aa31LG10G570 Aethionema arabicum
Aa31LG1G19880 Aethionema arabicum
Aa31LG4G6230 Aethionema arabicum
Aa31LG8G570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3465 Anthoceros agrestis
Actinidia03674 Actinidia chinensis
Actinidia15468 Actinidia chinensis
Actinidia17023 Actinidia chinensis
Actinidia33185 Actinidia chinensis
Actinidia33186 Actinidia chinensis
Actinidia35864 Actinidia chinensis
Ah.13g073330 Amaranthus hybridus
Ah.13g078140 Amaranthus hybridus
AL1G14600 Arabidopsis lyrata
AL2G36150 Arabidopsis lyrata
AL3G25180 Arabidopsis lyrata
AL3G25200 Arabidopsis lyrata
Aqoxy1G04297 Aquilegia oxysepala
Aqoxy2G02705 Aquilegia oxysepala
Aqoxy2G03859 Aquilegia oxysepala
Aqoxy5G01079 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.03HAKR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1C5WUF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8P4JNJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J9QP8S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K5DIHH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KFLF6K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R8R3SK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YM4VCW Arachis hypogaea
AT1G04880 Arabidopsis thaliana
AT1G55650 Arabidopsis thaliana
AT1G76110 Arabidopsis thaliana
AT3G13350 Arabidopsis thaliana
ATR0661G320 Amborella trichopoda
ATR0693G224 Amborella trichopoda
ATR0751G203 Amborella trichopoda
ATR1145G108 Amborella trichopoda
Atru.chr13.200 Acer truncatum
Atru.chr2.3895 Acer truncatum
Atru.chr4.1702 Acer truncatum
AUR62002429 Chenopodium quinoa
AUR62013853 Chenopodium quinoa
AUR62018594 Chenopodium quinoa
AUR62020824 Chenopodium quinoa
AUR62023759 Chenopodium quinoa
AUR62036747 Chenopodium quinoa
AUR62036749 Chenopodium quinoa
BcaB02g06895 Brassica carinata
BcaB02g10808 Brassica carinata
BcaB03g13467 Brassica carinata
BcaB06g25460 Brassica carinata
BcaB06g25461 Brassica carinata
BcaB06g25462 Brassica carinata
BcaB06g25463 Brassica carinata
BcaB06g25464 Brassica carinata
BcaB06g25465 Brassica carinata
BcaB06g25466 Brassica carinata
BcaB06g25467 Brassica carinata
BcaB06g25468 Brassica carinata
BcaB06g25469 Brassica carinata
BcaB07g33194 Brassica carinata
BcaB08g35798 Brassica carinata
BcaC02g09388 Brassica carinata
BcaC05g24433 Brassica carinata
BcaC05g29186 Brassica carinata
BcaC05g29187 Brassica carinata
BcaC07g36873 Brassica carinata
BcaC07g42156 Brassica carinata
BcaC08g43643 Brassica carinata
BcaC08g44208 Brassica carinata
BcaC08g47104 Brassica carinata
BcaC08g47291 Brassica carinata
BcaNung05157 Brassica carinata
BcaNung05159 Brassica carinata
BcaNung05160 Brassica carinata
BcaNung05161 Brassica carinata
BolC4t25792H Brassica oleracea
BolC5t29085H Brassica oleracea
BolC5t34121H Brassica oleracea
BolC5t34123H Brassica oleracea
BolC6t36142H Brassica oleracea
BolC6t36814H Brassica oleracea
BolC6t40044H Brassica oleracea
BolC8t46960H Brassica oleracea
BolC8t52735H Brassica oleracea
BraA04t16526Z Brassica rapa
BraA05t20632Z Brassica rapa
BraA05t22423Z Brassica rapa
BraA05t22425Z Brassica rapa
BraA05t22428Z Brassica rapa
BraA06t23222Z Brassica rapa
BraA07t31696Z Brassica rapa
BraA08t35569Z Brassica rapa
BraA09t42100Z Brassica rapa
BraA10t42607Z Brassica rapa
C04p42090 Brassica napus
C05p03030 Brassica napus
C05p54550 Brassica napus
C05p54570 Brassica napus
C06p10620 Brassica napus
C06p16170 Brassica napus
C06p50050 Brassica napus
C08p01550 Brassica napus
C08p52030 Brassica napus
CAN.G1635.7 Capsicum annuum
CAN.G268.3 Capsicum annuum
CAN.G401.12 Capsicum annuum
CAN.G401.4 Capsicum annuum
CAN.G401.6 Capsicum annuum
CAN.G8.47 Capsicum annuum
CANSAT11G1516 Cannabis sativa
CANSAT25G2358 Cannabis sativa
CANSAT78G1324 Cannabis sativa
CARHR004270 Cardamine hirsuta
CARHR069650 Cardamine hirsuta
CARHR087960 Cardamine hirsuta
Carub.0001s0412 Capsella rubella
Carub.0001s3629 Capsella rubella
Carub.0001s4417 Capsella rubella
Carub.0002s0846 Capsella rubella
Carub.0002s0851 Capsella rubella
Carub.0002s0854 Capsella rubella
Carub.0002s2299 Capsella rubella
Carub.0003s1273 Capsella rubella
Carub.0004s1422 Capsella rubella
Carub.0007s3214 Capsella rubella
Ca_11377_v3 Cicer arietinum L.
Ca_14139_v3 Cicer arietinum L.
Ca_15451_v3 Cicer arietinum L.
CBR_g48690 Chara braunii
Cc03_g07860 Coffea canephora
Cc05_g15700 Coffea canephora
Cc10_g01010 Coffea canephora
CDE02G0773 Ceratophyllum demersum
CDE02G4389 Ceratophyllum demersum
CDE03G0487 Ceratophyllum demersum
CDE04G1419 Ceratophyllum demersum
CDE06G2760 Ceratophyllum demersum
CDE06G2769 Ceratophyllum demersum
Cfa014019 Carpinus fangiana
Cfa014913 Carpinus fangiana
Cfa016960 Carpinus fangiana
Ciclev10001816m.g Citrus clementina
Ciclev10005091m.g Citrus clementina
Ciclev10008919m.g Citrus clementina
CiPaw.01G121000 Carya illinoinensis
CiPaw.02G066300 Carya illinoinensis
CiPaw.07G142500 Carya illinoinensis
CiPaw.09G129700 Carya illinoinensis
CiPaw.11G210600 Carya illinoinensis
CiPaw.12G142500 Carya illinoinensis
ClCG05G015360 Citrullus lanatus
ClCG06G007770 Citrullus lanatus
COL.COLO4_07788 Corchorus olitorius
COL.COLO4_09888 Corchorus olitorius
COL.COLO4_26067 Corchorus olitorius
Cpa.g.sc1068.1 Carica papaya
Cpa.g.sc12.68 Carica papaya
Cpa.g.sc26.248 Carica papaya
Cre13.g571050 Chlamydomonas reinhardtii
CsaV3_2G011520 Cucumis sativus L.
CsaV3_4G037000 Cucumis sativus L.
CSS0037068 Camellia sinensis var. sinensis
CSS0039401 Camellia sinensis var. sinensis
CSS0043696 Camellia sinensis var. sinensis
CSS0046638 Camellia sinensis var. sinensis
CSS0047336 Camellia sinensis var. sinensis
CSS0050103 Camellia sinensis var. sinensis
DCAR_013758 Daucus carota
DCAR_017610 Daucus carota
DCAR_024473 Daucus carota
DCAR_026613 Daucus carota
Dinv03680 Davidia involucrata
Dinv12686 Davidia involucrata
Dinv19195 Davidia involucrata
Dinv19644 Davidia involucrata
Dinv27237 Davidia involucrata
Dinv31906 Davidia involucrata
Dinv38233 Davidia involucrata
Dinv39562 Davidia involucrata
Dinv40915 Davidia involucrata
Duzib041G0438 Durio zibethinus
Duzib093G0420 Durio zibethinus
Duzib116G0121 Durio zibethinus
Duzib212G0740 Durio zibethinus
Duzib213G0274 Durio zibethinus
Duzib268G0395 Durio zibethinus
Duzib268G0907 Durio zibethinus
ECA232G0527 Erigeron canadensis
ECA238G1605 Erigeron canadensis
ECA240G2895 Erigeron canadensis
ECA248G3338 Erigeron canadensis
EL10Ac1g02053 Beta vulgaris
EL10Ac3g06122 Beta vulgaris
EL10Ac3g07478 Beta vulgaris
Eucgr.F01991 Eucalyptus grandis
Eucgr.F03526 Eucalyptus grandis
Eucgr.H00052 Eucalyptus grandis
FAN07G2115 Fragaria x ananassa
FAN11G1862 Fragaria x ananassa
FAN12G3417 Fragaria x ananassa
FAN15G0503 Fragaria x ananassa
FAN16G2494 Fragaria x ananassa
FAN17G1455 Fragaria x ananassa
FAN20G1477 Fragaria x ananassa
FAN21G2040 Fragaria x ananassa
FAN22G0086 Fragaria x ananassa
FAN25G3495 Fragaria x ananassa
FAN27G0685 Fragaria x ananassa
FvH4_3g41610 Fragaria vesca
FvH4_4g16370 Fragaria vesca
Glyma.04G020000 Glycine max
Glyma.04G113000 Glycine max
Glyma.06G321700 Glycine max
Glyma.10G294000 Glycine max
Glyma.10G294100 Glycine max
Glyma.20G243900 Glycine max
Gohir.A03G094500 Gossypium hirsutum
Gohir.A05G182100 Gossypium hirsutum
Gohir.A10G124901 Gossypium hirsutum
Gohir.A13G128500 Gossypium hirsutum
Gohir.D02G123900 Gossypium hirsutum
Gohir.D05G185100 Gossypium hirsutum
Gohir.D10G141600 Gossypium hirsutum
Gohir.D13G131900 Gossypium hirsutum
Gorai.002G194700 Gossypium raimondii
Gorai.005G130200 Gossypium raimondii
Gorai.009G190400 Gossypium raimondii
Gorai.011G157600 Gossypium raimondii
Gorai.013G147900 Gossypium raimondii
GSVIVG01008723001 Vitis vinifera
GSVIVG01014843001 Vitis vinifera
GSVIVG01021061001 Vitis vinifera
HanXRQChr03g0077881 Helianthus annuus
HanXRQChr04g0114861 Helianthus annuus
HanXRQChr14g0435981 Helianthus annuus
Haze_09915 Corylus avellana
Haze_11610 Corylus avellana
Haze_22726 Corylus avellana
Hma1.2p1_0383F.1_g140250 Hydrangea macrophylla
Hma1.2p1_0383F.1_g140260 Hydrangea macrophylla
Hma1.2p1_1407F.1_g281450 Hydrangea macrophylla
HPP92_003491 Vanilla planifolia
HPP92_008114 Vanilla planifolia
HPP92_009907 Vanilla planifolia
HPP92_020464 Vanilla planifolia
HPP92_026168 Vanilla planifolia
HPP92_026889 Vanilla planifolia
Hund05144 Selenicereus undatus
Hund22972 Selenicereus undatus
Lalb_Chr02g0144151 Lupinus albus
Lalb_Chr08g0246331 Lupinus albus
Lalb_Chr11g0061761 Lupinus albus
Lalb_Chr11g0061771 Lupinus albus
Lalb_Chr11g0072731 Lupinus albus
Lalb_Chr18g0048641 Lupinus albus
Lalb_Chr21g0307471 Lupinus albus
Lj1g0016144 Lotus japonicus
Lj1g0016814 Lotus japonicus
Lj1g0017531 Lotus japonicus
Lj3g0005977 Lotus japonicus
Lj4A16T126 Lonicera japonica
Lj5g0016874 Lotus japonicus
Lj6A553G29 Lonicera japonica
Lj8A183T36 Lonicera japonica
Lsat_1_v5_gn_1_71820 Lactuca sativa
Lsat_1_v5_gn_2_44980 Lactuca sativa
Lsat_1_v5_gn_9_46720 Lactuca sativa
Lsat_1_v5_gn_9_88540 Lactuca sativa
Manes.03G147600 Manihot esculenta
Manes.05G204800 Manihot esculenta
Manes.15G053800 Manihot esculenta
Manes.18G008500 Manihot esculenta
Mapoly0043s0128 Marchantia polymorpha
MBI01_g25650_MAGBIO Magnolia biondii
MBI03_g39993_MAGBIO Magnolia biondii
MBI05_g05627_MAGBIO Magnolia biondii
MBI05_g05629_MAGBIO Magnolia biondii
MBI05_g24485_MAGBIO Magnolia biondii
MBI08_g40331_MAGBIO Magnolia biondii
MBI08_g42718_MAGBIO Magnolia biondii
MBI09_g14588_MAGBIO Magnolia biondii
MBI10_g22588_MAGBIO Magnolia biondii
MBI12_g45469_MAGBIO Magnolia biondii
MBI14_g29305_MAGBIO Magnolia biondii
MBI14_g47062_MAGBIO Magnolia biondii
MBI15_g44393_MAGBIO Magnolia biondii
MBI16_g37640_MAGBIO Magnolia biondii
MBI18_g09847_MAGBIO Magnolia biondii
MBI19_g14784_MAGBIO Magnolia biondii
MD03G1042900 Malus domestica
MD04G1008800 Malus domestica
MD08G1006400 Malus domestica
MD11G1045900 Malus domestica
MD13G1138800 Malus domestica
MD15G1005800 Malus domestica
Medtr1g116180 Medicago truncatula
Medtr3g009890 Medicago truncatula
Medtr3g114920 Medicago truncatula
Medtr7g005970 Medicago truncatula
MELO3C016999.2 Cucumis melo
MELO3C020449.2 Cucumis melo
MELO3C028458.2 Cucumis melo
Migut.C00909 Erythranthe guttata
Migut.G00695 Erythranthe guttata
Migut.H01714 Erythranthe guttata
MSTRG.13044 Avicennia marina
MSTRG.14524 Avicennia marina
Nitab4.5_0000498g0170 Nicotiana tabacum
Nitab4.5_0000898g0060 Nicotiana tabacum
Nitab4.5_0000898g0160 Nicotiana tabacum
Nitab4.5_0002216g0010 Nicotiana tabacum
Nitab4.5_0002353g0020 Nicotiana tabacum
Nitab4.5_0003570g0010 Nicotiana tabacum
Nitab4.5_0019106g0010 Nicotiana tabacum
Nn1g07633 Nelumbo nucifera
Nn1g07879 Nelumbo nucifera
Nn3g17439 Nelumbo nucifera
Nn3g20036 Nelumbo nucifera
Nn5g30235 Nelumbo nucifera
Nn5g30869 Nelumbo nucifera
Nn6g31871 Nelumbo nucifera
Nn6g34418 Nelumbo nucifera
Oeu006262.2 Olea europaea
Oeu013804.1 Olea europaea
Oeu019804.1 Olea europaea
Oeu019807.1 Olea europaea
Oeu019814.1 Olea europaea
Oeu019815.1 Olea europaea
Oeu022371.1 Olea europaea
Oeu034575.1 Olea europaea
Oeu034576.1 Olea europaea
Oeu041363.1 Olea europaea
Oeu055360.1 Olea europaea
Oeu064068.1 Olea europaea
Os02g0469900 Oryza sativa ssp. japonica
Peaxi162Scf00047g00519 Petunia axillaris
Peaxi162Scf00064g00829 Petunia axillaris
Peaxi162Scf15341g00003 Petunia axillaris
PGR031G2500 Punica granatum
PGR083G2486 Punica granatum
PGR142G3678 Punica granatum
PGSC0003DMG400029327 Solanum tuberosum
PGSC0003DMG400031288 Solanum tuberosum
PGSC0003DMG401018896 Solanum tuberosum
PGSC0003DMG402018896 Solanum tuberosum
Phvul.005G004300 Phaseolus vulgaris
Phvul.007G006000 Phaseolus vulgaris
Phvul.007G006100 Phaseolus vulgaris
Phvul.009G020700 Phaseolus vulgaris
Potri.001G315200 Populus trichocarpa
Potri.005G246700 Populus trichocarpa
Potri.011G168800 Populus trichocarpa
Potri.017G055200 Populus trichocarpa
Pp3c1_33100 Physcomitrium patens
Pp3c7_23660 Physcomitrium patens
Prupe.1G008100 Prunus persica
Prupe.1G358300 Prunus persica
Prupe.6G035300 Prunus persica
Psat0s2083g0160 Pisum sativum
Psat0s2083g0240 Pisum sativum
Psat0s2228g0080 Pisum sativum
Psat3g107360 Pisum sativum
Psat5g011640 Pisum sativum
Psat5g231880 Pisum sativum
Psat6g240880 Pisum sativum
Psat6g240920 Pisum sativum
Psat7g039280 Pisum sativum
Psat7g043960 Pisum sativum
Psat7g192760 Pisum sativum
Psat7g192800 Pisum sativum
PSO017G7019 Papaver somniferum
PSO063G2803 Papaver somniferum
PSO063G5485 Papaver somniferum
PSO170G1184 Papaver somniferum
PSO210G5207 Papaver somniferum
PSO782G5301 Papaver somniferum
QL02p013344 Quercus lobata
QL06p024828 Quercus lobata
QL08p000529 Quercus lobata
QL09p053965 Quercus lobata
RcHm_v2.0_Chr4g0415261 Rosa chinensis
RcHm_v2.0_Chr5g0074651 Rosa chinensis
RcHm_v2.0_Chr6g0303791 Rosa chinensis
Rhsim01G0255400 Rhododendron simsii
Rhsim04G0007700 Rhododendron simsii
Rhsim06G0010600 Rhododendron simsii
Rhsim09G0056200 Rhododendron simsii
Sabra05G0190700 Salix brachista
Sabra11G0137900 Salix brachista
Sabra16G0199400 Salix brachista
Sabra17G0046800 Salix brachista
Sabra17G0049000 Salix brachista
SalBow7G1352 Salvia bowleyana
SalBow8G0560 Salvia bowleyana
SalBow8G3132 Salvia bowleyana
Sc03g0011770 Simmondsia chinensis
Sc13g0000190 Simmondsia chinensis
Sc26g0004500 Simmondsia chinensis
Sed0002207 Sechium edule
Sed0018827 Sechium edule
Sed0026703 Sechium edule
SEGI_03044 Sequoiadendron giganteum
SEGI_07905 Sequoiadendron giganteum
SEGI_08051 Sequoiadendron giganteum
SEGI_16568 Sequoiadendron giganteum
SEGI_20255 Sequoiadendron giganteum
SEGI_21670 Sequoiadendron giganteum
SEGI_22736 Sequoiadendron giganteum
SEGI_24820 Sequoiadendron giganteum
SEGI_28457 Sequoiadendron giganteum
SEGI_29019 Sequoiadendron giganteum
SEGI_34433 Sequoiadendron giganteum
SEGI_36133 Sequoiadendron giganteum
SEGI_37314 Sequoiadendron giganteum
SEGI_37984 Sequoiadendron giganteum
SEGI_38962 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05960 Striga asiatica
SGA_v2.0_scaffold145G36109 Striga asiatica
SGA_v2.0_scaffold57G20102 Striga asiatica
SGA_v2.0_scaffold92G28174 Striga asiatica
SHI01078 Sapria himalayana
SHI01084 Sapria himalayana
SHI21549 Sapria himalayana
SHI21553 Sapria himalayana
SMO367G0512 Selaginella moellendorffii
SMO367G0741 Selaginella moellendorffii
Solyc01g011277.1 Solanum lycopersicum
Solyc09g091960.3 Solanum lycopersicum
Solyc12g016190.2 Solanum lycopersicum
Solyc12g094440.2 Solanum lycopersicum
Sopen09g034860 Solanum pennellii
Sopen12g007980 Solanum pennellii
Sopen12g031330 Solanum pennellii
Sp1g03720 Schrenkiella parvula
Sp1g41270 Schrenkiella parvula
Sp3g11550 Schrenkiella parvula
Sp4g15180 Schrenkiella parvula
Sp5g31230 Schrenkiella parvula
SpUn0748_0010 Schrenkiella parvula
TAR362G1147 Trochodendron aralioides
TAR362G1235 Trochodendron aralioides
TAR365G1158 Trochodendron aralioides
TAR627G0328 Trochodendron aralioides
TAR628G0748 Trochodendron aralioides
THA.LOC104801030 Tarenaya hassleriana
THA.LOC104810304 Tarenaya hassleriana
THA.LOC104811448 Tarenaya hassleriana
THA.LOC104822702 Tarenaya hassleriana
THA.LOC104827380 Tarenaya hassleriana
Thecc.04G201600 Theobroma cacao
Thecc.04G201800 Theobroma cacao
Thecc.04G203600 Theobroma cacao
Thecc.07G001600 Theobroma cacao
Thecc.08G053400 Theobroma cacao
Thhalv10007631m.g Eutrema salsugineum
Thhalv10011675m.g Eutrema salsugineum
Thhalv10017702m.g Eutrema salsugineum
Thhalv10017860m.g Eutrema salsugineum
Thhalv10018826m.g Eutrema salsugineum
Thhalv10021143m.g Eutrema salsugineum
TPR.G10416 Trifolium pratense
TPR.G15603 Trifolium pratense
TPR.G16692 Trifolium pratense
TPR.G38136 Trifolium pratense
TWI09G0965 Tripterygium wilfordii
TWI09G1575 Tripterygium wilfordii
TWI38G2024 Tripterygium wilfordii
TWI39G1003 Tripterygium wilfordii
TWI56G0846 Tripterygium wilfordii
TWI73G1259 Tripterygium wilfordii
unitig_21.g20260 Utricularia gibba
unitig_46.g18041 Utricularia gibba
unitig_744.g24498 Utricularia gibba
unitig_747.g21678 Utricularia gibba
vmacro00473 Vaccinium macrocarpon
vmacro09799 Vaccinium macrocarpon
vmacro21843 Vaccinium macrocarpon
VMungo0720G0565 Vigna mungo
VMungo1080G0142 Vigna mungo
VMungo1309G2014 Vigna mungo
Zm00001eb203110 Zea mays
Zm00001eb240740 Zea mays

User provided reference genes

Program Settings