Gene: Solyc12g016190.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g016190.2
  • Transcript Identifier Solyc12g016190.2.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 6354628-6369064 : positive

Gene Family Information

  • ID HOM05D001261
  • #Genes/#Species 496/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g016190.2.1
  • uniprot A0A3Q7JTU6
  • gene_id Solyc12g016190

Descriptions

  • Description High mobility group B protein 10 (AHRD V3.3 *** A0A2G2X5K3_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G55650

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036910 High mobility group box domain superfamily
IPR036431 ARID DNA-binding domain superfamily
IPR001606 ARID DNA-binding domain
IPR009071 High mobility group box domain
Mapman id Description
12.1.3.1 Chromatin organisation.chromatin structure.DNA bending.architectural protein (HMG-B)