Gene: Solyc12g094440.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g094440.2
  • Transcript Identifier Solyc12g094440.2.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 64133933-64139290 : negative

Gene Family Information

  • ID HOM05D001261
  • #Genes/#Species 496/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g094440.2.1
  • uniprot A0A3Q7JY69
  • gene_id Solyc12g094440

Descriptions

  • Description High mobility group B protein 9 (AHRD V3.3 *** A0A2G2YA23_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010197
ISO
PLAZA Integrative Orthologypolar nucleus fusion AT1G76110
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT1G76110
GO:0000741
ISO
PLAZA Integrative Orthologykaryogamy AT1G76110

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G76110

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001606 ARID DNA-binding domain
IPR036431 ARID DNA-binding domain superfamily
IPR036910 High mobility group box domain superfamily
IPR009071 High mobility group box domain
Mapman id Description
12.1.3.1 Chromatin organisation.chromatin structure.DNA bending.architectural protein (HMG-B)