Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.SUMB0F Arachis hypogaea HOM05D006129 ORTHO05D007446 1.5e-107 392.9 208 100.0
arahy.Tifrunner.gnm1.ann1.769PPM Arachis hypogaea HOM05D006129 ORTHO05D007446 2.0e-86 322.8 196 90.8
TWI31G0609 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 8.3e-53 211.1 169 62.1
Lj2g0010354 Lotus japonicus HOM05D006129 ORTHO05D007446 5.4e-52 208.4 158 63.9
Lalb_Chr10g0095451 Lupinus albus HOM05D006129 ORTHO05D007446 5.4e-52 208.4 200 58.5
TWI79G0519 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 2.3e-50 203.0 169 60.4
Duzib248G0151 Durio zibethinus HOM05D006129 ORTHO05D007446 3.3e-49 199.1 177 61.6
Thecc.02G095400 Theobroma cacao HOM05D006129 ORTHO05D007446 5.6e-49 198.4 173 62.4
Potri.009G106800 Populus trichocarpa HOM05D006129 ORTHO05D007446 7.3e-49 198.0 182 58.8
CANSAT25G2181 Cannabis sativa HOM05D006129 ORTHO05D007446 9.5e-49 197.6 191 55.5
FAN24G2628 Fragaria x ananassa HOM05D006129 ORTHO05D007446 3.6e-48 195.7 165 58.2
Ca_13480_v3 Cicer arietinum L. HOM05D006129 ORTHO05D007446 4.7e-48 195.3 176 60.2
FvH4_2g06900 Fragaria vesca HOM05D006129 ORTHO05D007446 4.7e-48 195.3 161 59.0
Gohir.D01G006000 Gossypium hirsutum HOM05D006129 ORTHO05D007446 8.0e-48 194.5 165 61.8
Psat6g001360 Pisum sativum HOM05D006129 ORTHO05D007446 8.0e-48 194.5 169 60.9
FAN27G0179 Fragaria x ananassa HOM05D006129 ORTHO05D007446 1.8e-47 193.4 165 57.0
Gorai.002G007000 Gossypium raimondii HOM05D006129 ORTHO05D007446 1.8e-47 193.4 155 63.2
Cpa.g.sc62.53 Carica papaya HOM05D006129 ORTHO05D007446 2.3e-47 193.0 152 61.8
RcHm_v2.0_Chr6g0259211 Rosa chinensis HOM05D006129 ORTHO05D007446 3.1e-47 192.6 182 54.4
Sabra09G0081600 Salix brachista HOM05D006129 ORTHO05D007446 3.1e-47 192.6 120 75.0
Glyma.20G009700 Glycine max HOM05D006129 ORTHO05D007446 5.2e-47 191.8 167 58.7
Gohir.A01G005900 Gossypium hirsutum HOM05D006129 ORTHO05D007446 6.8e-47 191.4 165 60.6
FAN15G2181 Fragaria x ananassa HOM05D006129 ORTHO05D007446 8.9e-47 191.0 162 58.6
GSVIVG01031785001 Vitis vinifera HOM05D006129 ORTHO05D007446 8.9e-47 191.0 163 60.1
CiPaw.05G055300 Carya illinoinensis HOM05D006129 ORTHO05D007446 2.6e-46 189.5 174 57.5
Dinv42121 Davidia involucrata HOM05D006129 ORTHO05D007446 2.6e-46 189.5 183 56.8
MD10G1089000 Malus domestica HOM05D006129 ORTHO05D007446 2.6e-46 189.5 169 57.4
QL11p038411 Quercus lobata HOM05D006129 ORTHO05D007446 2.6e-46 189.5 181 54.7
CARHR106180 Cardamine hirsuta HOM05D006129 ORTHO05D007446 3.4e-46 189.1 130 68.5
Manes.17G094600 Manihot esculenta HOM05D006129 ORTHO05D007446 4.4e-46 188.7 118 72.9
Atru.BG.82.p Acer truncatum HOM05D006129 ORTHO05D007446 5.8e-46 188.3 104 80.8
Eucgr.L00820 Eucalyptus grandis HOM05D006129 ORTHO05D007446 5.8e-46 188.3 180 56.1
Eucgr.L01320 Eucalyptus grandis HOM05D006129 ORTHO05D007446 5.8e-46 188.3 178 56.7
Phvul.002G308800 Phaseolus vulgaris HOM05D006129 ORTHO05D007446 7.5e-46 188.0 169 59.8
TAR371G0476 Trochodendron aralioides HOM05D006129 ORTHO05D007446 7.5e-46 188.0 179 55.9
TPR.G26422 Trifolium pratense HOM05D006129 ORTHO05D007446 1.3e-45 187.2 175 58.3
Cfa005424 Carpinus fangiana HOM05D006129 ORTHO05D007446 2.2e-45 186.4 169 55.0
unitig_744.g24241 Utricularia gibba HOM05D006129 ORTHO05D007446 2.2e-45 186.4 161 57.8
vmacro02172 Vaccinium macrocarpon HOM05D006129 ORTHO05D007446 2.2e-45 186.4 173 59.5
COL.COLO4_11724 Corchorus olitorius HOM05D006129 ORTHO05D007446 4.9e-45 185.3 132 65.9
THA.LOC104807348 Tarenaya hassleriana HOM05D006129 ORTHO05D007446 4.9e-45 185.3 152 57.2
Rhsim11G0169300 Rhododendron simsii HOM05D006129 ORTHO05D007446 8.3e-45 184.5 184 54.9
Migut.B00306 Erythranthe guttata HOM05D006129 ORTHO05D007446 1.1e-44 184.1 175 53.7
Actinidia12976 Actinidia chinensis HOM05D006129 ORTHO05D007446 1.4e-44 183.7 186 52.7
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 1.4e-44 183.7 164 54.9
Haze_01881 Corylus avellana HOM05D006129 ORTHO05D007446 1.9e-44 183.3 187 52.9
Nn4g23272 Nelumbo nucifera HOM05D006129 ORTHO05D007446 1.9e-44 183.3 165 58.2
BcaB03g16332 Brassica carinata HOM05D006129 ORTHO05D007446 2.4e-44 183.0 185 53.5
BcaC06g36090 Brassica carinata HOM05D006129 ORTHO05D007446 2.4e-44 183.0 162 56.8
C07p07940 Brassica napus HOM05D006129 ORTHO05D007446 2.4e-44 183.0 162 56.8
BolC7t41212H Brassica oleracea HOM05D006129 ORTHO05D007446 2.4e-44 183.0 162 56.8
Dinv23594 Davidia involucrata HOM05D006129 ORTHO05D007446 2.4e-44 183.0 175 54.9
Medtr1g026035 Medicago truncatula HOM05D006129 ORTHO05D007446 2.4e-44 183.0 123 67.5
Carub.0003s2972 Capsella rubella HOM05D006129 ORTHO05D007446 3.2e-44 182.6 166 56.6
Ciclev10027854m.g Citrus clementina HOM05D006129 ORTHO05D007446 3.2e-44 182.6 173 55.5
AL3G47590 Arabidopsis lyrata HOM05D006129 ORTHO05D007446 4.1e-44 182.2 165 57.6
Sed0004701 Sechium edule HOM05D006129 ORTHO05D007446 4.1e-44 182.2 173 56.1
Nitab4.5_0007303g0010 Nicotiana tabacum HOM05D006129 ORTHO05D007446 5.4e-44 181.8 182 54.9
PGR042G1055 Punica granatum HOM05D006129 ORTHO05D007446 7.0e-44 181.4 164 60.4
Aqoxy3G03484 Aquilegia oxysepala HOM05D006129 ORTHO05D007446 9.2e-44 181.0 150 59.3
A07p04960 Brassica napus HOM05D006129 ORTHO05D007446 9.2e-44 181.0 161 55.3
BraA07t28289Z Brassica rapa HOM05D006129 ORTHO05D007446 9.2e-44 181.0 161 55.3
CSS0025307 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 9.2e-44 181.0 129 65.1
Prupe.8G116000 Prunus persica HOM05D006129 ORTHO05D007446 9.2e-44 181.0 163 56.4
VMungo0464G0688 Vigna mungo HOM05D006129 ORTHO05D007446 9.2e-44 181.0 140 64.3
ECA234G4125 Erigeron canadensis HOM05D006129 ORTHO05D007446 1.2e-43 180.6 127 64.6
HanXRQChr10g0303221 Helianthus annuus HOM05D006129 ORTHO05D007446 1.2e-43 180.6 164 53.7
CSS0048591 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 1.6e-43 180.3 129 65.1
CAN.G644.34 Capsicum annuum HOM05D006129 ORTHO05D007446 2.1e-43 179.9 114 71.9
MELO3C026699.2 Cucumis melo HOM05D006129 ORTHO05D007446 2.1e-43 179.9 190 53.2
Lsat_1_v5_gn_5_113460 Lactuca sativa HOM05D006129 ORTHO05D007446 2.1e-43 179.9 168 54.8
Aa31LG8G13380 Aethionema arabicum HOM05D006129 ORTHO05D007446 2.7e-43 179.5 156 55.8
Lj5P206T15 Lonicera japonica HOM05D006129 ORTHO05D007446 2.7e-43 179.5 181 50.8
Sp3g29130 Schrenkiella parvula HOM05D006129 ORTHO05D007446 3.5e-43 179.1 130 63.1
AT2G15820 Arabidopsis thaliana HOM05D006129 ORTHO05D007446 6.0e-43 178.3 130 63.8
DCAR_003623 Daucus carota HOM05D006129 ORTHO05D007446 7.8e-43 177.9 180 51.7
Glyma.07G178800 Glycine max HOM05D006129 ORTHO05D007446 7.8e-43 177.9 176 55.7
Sc08g0000140 Simmondsia chinensis HOM05D006129 ORTHO05D007446 7.8e-43 177.9 159 57.2
CsaV3_3G028800 Cucumis sativus L. HOM05D006129 ORTHO05D007446 1.0e-42 177.6 167 55.1
CDE04G1903 Ceratophyllum demersum HOM05D006129 ORTHO05D007446 1.3e-42 177.2 120 66.7
Oeu057674.1 Olea europaea HOM05D006129 ORTHO05D007446 1.3e-42 177.2 161 55.3
Thhalv10022548m.g Eutrema salsugineum HOM05D006129 ORTHO05D007446 2.3e-42 176.4 166 54.8
SGA_v2.0_scaffold58G20604 Striga asiatica HOM05D006129 ORTHO05D007446 2.3e-42 176.4 175 53.7
TAR629G1760 Trochodendron aralioides HOM05D006129 ORTHO05D007446 5.1e-42 175.3 176 52.8
Peaxi162Scf00789g00530 Petunia axillaris HOM05D006129 ORTHO05D007446 8.6e-42 174.5 180 55.6
Solyc11g066850.3 Solanum lycopersicum HOM05D006129 ORTHO05D007446 7.3e-41 171.4 185 50.3
Hund00318 Selenicereus undatus HOM05D006129 ORTHO05D007446 9.5e-41 171.0 115 66.1
Zm00001eb251880 Zea mays HOM05D006129 ORTHO05D007446 1.2e-40 170.6 166 56.0
Nitab4.5_0001453g0090 Nicotiana tabacum HOM05D006129 ORTHO05D007446 1.4e-39 167.2 153 55.6
MSTRG.20134 Avicennia marina HOM05D006129 ORTHO05D007446 4.0e-39 165.6 181 51.4
Cc02_g18430 Coffea canephora HOM05D006129 ORTHO05D007446 1.2e-38 164.1 172 54.1
HPP92_022045 Vanilla planifolia HOM05D006129 ORTHO05D007446 2.0e-38 163.3 140 55.0
ATR0665G475 Amborella trichopoda HOM05D006129 ORTHO05D007446 2.6e-38 162.9 104 67.3
Os02g0702000 Oryza sativa ssp. japonica HOM05D006129 ORTHO05D007446 3.4e-38 162.5 179 49.7
AUR62016636 Chenopodium quinoa HOM05D006129 ORTHO05D007446 1.9e-36 156.8 132 56.8
AUR62011424 Chenopodium quinoa HOM05D006129 ORTHO05D007446 4.1e-36 155.6 179 50.8
Eucgr.G01504 Eucalyptus grandis HOM05D006129 ORTHO05D007446 9.2e-36 154.5 165 53.3
EL10Ac9g21818 Beta vulgaris HOM05D006129 ORTHO05D007446 2.1e-35 153.3 179 45.8
Ah.01g006750 Amaranthus hybridus HOM05D006129 ORTHO05D007446 6.0e-35 151.8 190 45.8
SEGI_31419 Sequoiadendron giganteum HOM05D006129 ORTHO05D007446 1.4e-31 140.6 121 52.1
PGSC0003DMG400026525 Solanum tuberosum HOM05D006129 ORTHO05D007446 4.2e-28 129.0 71 78.9
Sopen11g026560 Solanum pennellii HOM05D006129 ORTHO05D007446 3.5e-27 125.9 71 77.5
Atru.chr5.2881 Acer truncatum HOM05D006129 ORTHO05D007446 1.0e-26 124.4 154 42.2
Atru.chr5.2887 Acer truncatum HOM05D006129 ORTHO05D007446 4.3e-25 119.0 160 43.1
Atru.chr5.2823 Acer truncatum HOM05D006129 ORTHO05D007446 1.5e-22 110.5 93 57.0
Atru.chr5.2826 Acer truncatum HOM05D006129 ORTHO05D007446 7.6e-22 108.2 184 40.2
QL11p038477 Quercus lobata HOM05D006129 ORTHO05D007446 6.4e-21 105.1 134 44.8
TAR371G0058 Trochodendron aralioides HOM05D006129 ORTHO05D007446 2.4e-20 103.2 179 38.5
TAR371G0992 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.6e-16 90.5 163 38.7
Mapoly0036s0055 Marchantia polymorpha HOM05D006129 ORTHO05D007446 2.4e-15 86.7 94 42.6
Pp3c16_23700 Physcomitrium patens HOM05D006129 ORTHO05D007446 1.5e-14 84.0 94 44.7
Atru.chr5.2820 Acer truncatum HOM05D006129 ORTHO05D007446 7.6e-14 81.6 77 53.2
AagrBONN_evm.TU.Sc2ySwM_344.5085 Anthoceros agrestis HOM05D006129 ORTHO05D007446 1.3e-13 80.9 109 37.6
Pp3c25_10050 Physcomitrium patens HOM05D006129 ORTHO05D007446 1.3e-13 80.9 164 32.9
SMO356G0628 Selaginella moellendorffii HOM05D006129 ORTHO05D007446 4.9e-13 79.0 122 32.8
RcHm_v2.0_Chr6g0302241 Rosa chinensis HOM05D006129 ORTHO05D007446 2.4e-12 76.6 59 57.6
RcHm_v2.0_Chr1g0376021 Rosa chinensis HOM05D006129 ORTHO05D007446 3.0e-10 69.7 54 57.4
RcHm_v2.0_Chr2g0152801 Rosa chinensis HOM05D006129 ORTHO05D007446 1.5e-09 67.4 56 58.9
AagrBONN_evm.TU.Sc2ySwM_344.1734 Anthoceros agrestis HOM05D006129 ORTHO05D007446 1.3e-08 64.3 95 33.7
Medtr0381s0010 Medicago truncatula HOM05D006129 ORTHO05D007446 2.8e-08 63.2 33 75.8
FAN20G2787 Fragaria x ananassa HOM05D006129 ORTHO05D007446 7.6e-06 55.1 33 69.7


User provided reference genes

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