Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.DW30WT Arachis hypogaea HOM05D000329 ORTHO05D000833 4.7e-79 297.7 145 100.0
arahy.Tifrunner.gnm1.ann1.6V6FMV Arachis hypogaea HOM05D000329 ORTHO05D000833 1.1e-75 286.6 145 95.9
arahy.Tifrunner.gnm1.ann1.AJP7R9 Arachis hypogaea HOM05D000329 ORTHO05D000833 1.1e-75 286.6 145 95.9
Glyma.01G219800 Glycine max HOM05D000329 ORTHO05D000833 3.6e-63 245.0 147 81.6
Glyma.11G023700 Glycine max HOM05D000329 ORTHO05D000833 3.6e-63 245.0 147 80.3
TPR.G6625 Trifolium pratense HOM05D000329 ORTHO05D000833 3.4e-61 238.4 147 75.5
Ca_24553_v3 Cicer arietinum L. HOM05D000329 ORTHO05D000833 1.3e-60 236.5 147 75.5
LjContig00312_ERROPOS870357g0009147 Lotus japonicus HOM05D000329 ORTHO05D000833 3.7e-60 235.0 151 75.5
Phvul.002G157500 Phaseolus vulgaris HOM05D000329 ORTHO05D000833 1.4e-59 233.0 147 74.1
VMungo1215G1167 Vigna mungo HOM05D000329 ORTHO05D000833 9.2e-59 230.3 147 74.1
Lalb_Chr09g0321021 Lupinus albus HOM05D000329 ORTHO05D000833 6.0e-58 227.6 147 76.2
Medtr5g010300 Medicago truncatula HOM05D000329 ORTHO05D000833 6.0e-58 227.6 147 72.8
Psat2g182320 Pisum sativum HOM05D000329 ORTHO05D000833 2.1e-55 219.2 147 70.1
Haze_08848 Corylus avellana HOM05D000329 ORTHO05D000833 4.3e-48 194.9 147 63.3
CiPaw.12G093800 Carya illinoinensis HOM05D000329 ORTHO05D000833 1.2e-47 193.4 147 63.9
Cfa012174 Carpinus fangiana HOM05D000329 ORTHO05D000833 5.2e-46 188.0 147 61.2
Manes.01G061050 Manihot esculenta HOM05D000329 ORTHO05D000833 6.4e-44 181.0 145 57.9
Ciclev10018462m.g Citrus clementina HOM05D000329 ORTHO05D000833 1.2e-42 176.8 147 61.2
QL12p033243 Quercus lobata HOM05D000329 ORTHO05D000833 2.1e-42 176.0 147 59.9
Thecc.03G277900 Theobroma cacao HOM05D000329 ORTHO05D000833 1.7e-41 172.9 145 57.9
Atru.chr9.2250 Acer truncatum HOM05D000329 ORTHO05D000833 3.0e-41 172.2 147 57.8
Prupe.5G099000 Prunus persica HOM05D000329 ORTHO05D000833 3.9e-41 171.8 147 55.1
MD14G1103700 Malus domestica HOM05D000329 ORTHO05D000833 1.9e-40 169.5 147 52.4
Dinv38948 Davidia involucrata HOM05D000329 ORTHO05D000833 2.5e-40 169.1 149 54.4
TWI81G0989 Tripterygium wilfordii HOM05D000329 ORTHO05D000833 9.6e-40 167.2 147 52.4
COL.COLO4_34455 Corchorus olitorius HOM05D000329 ORTHO05D000833 2.1e-39 166.0 145 53.8
Gohir.A08G182350 Gossypium hirsutum HOM05D000329 ORTHO05D000833 3.6e-39 165.2 145 54.5
TAR636G0974 Trochodendron aralioides HOM05D000329 ORTHO05D000833 8.1e-39 164.1 149 57.7
RcHm_v2.0_Chr7g0197841 Rosa chinensis HOM05D000329 ORTHO05D000833 1.4e-38 163.3 147 51.0
Duzib068G0085 Durio zibethinus HOM05D000329 ORTHO05D000833 2.4e-38 162.5 130 59.2
Gohir.D08G200900 Gossypium hirsutum HOM05D000329 ORTHO05D000833 3.1e-38 162.2 145 54.5
MD06G1081900 Malus domestica HOM05D000329 ORTHO05D000833 4.0e-38 161.8 147 51.0
Gorai.004G211700 Gossypium raimondii HOM05D000329 ORTHO05D000833 1.5e-37 159.8 145 53.8
GSVIVG01019761001 Vitis vinifera HOM05D000329 ORTHO05D000833 1.5e-37 159.8 149 55.7
Cpa.g.sc74.32 Carica papaya HOM05D000329 ORTHO05D000833 2.6e-37 159.1 146 54.8
Sabra03G0089600 Salix brachista HOM05D000329 ORTHO05D000833 3.4e-37 158.7 147 53.7
CSS0031193 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D000833 2.9e-36 155.6 149 51.0
ClCG01G002770 Citrullus lanatus HOM05D000329 ORTHO05D000833 2.9e-36 155.6 147 51.0
ECA246G1250 Erigeron canadensis HOM05D000329 ORTHO05D000833 2.9e-36 155.6 147 50.3
PGR031G0355 Punica granatum HOM05D000329 ORTHO05D000833 3.8e-36 155.2 147 48.3
FAN18G0976 Fragaria x ananassa HOM05D000329 ORTHO05D000833 6.4e-36 154.5 147 48.3
Potri.003G126600 Populus trichocarpa HOM05D000329 ORTHO05D000833 2.4e-35 152.5 147 53.1
FAN08G1575 Fragaria x ananassa HOM05D000329 ORTHO05D000833 4.2e-35 151.8 147 47.6
FvH4_5g02310 Fragaria vesca HOM05D000329 ORTHO05D000833 5.4e-35 151.4 147 47.6
AUR62010670 Chenopodium quinoa HOM05D000329 ORTHO05D000833 7.1e-35 151.0 148 52.0
CsaV3_5G002860 Cucumis sativus L. HOM05D000329 ORTHO05D000833 9.3e-35 150.6 147 49.7
Lsat_1_v5_gn_3_7360 Lactuca sativa HOM05D000329 ORTHO05D000833 1.2e-34 150.2 149 51.0
Hund14803 Selenicereus undatus HOM05D000329 ORTHO05D000833 2.7e-34 149.1 146 50.7
Sc01g0009540 Simmondsia chinensis HOM05D000329 ORTHO05D000833 2.7e-34 149.1 148 52.7
FAN13G2110 Fragaria x ananassa HOM05D000329 ORTHO05D000833 3.5e-34 148.7 147 47.6
MSTRG.13841 Avicennia marina HOM05D000329 ORTHO05D000833 4.6e-34 148.3 147 46.3
FAN04G0379 Fragaria x ananassa HOM05D000329 ORTHO05D000833 7.9e-34 147.5 147 46.3
HanXRQChr17g0533711 Helianthus annuus HOM05D000329 ORTHO05D000833 1.3e-33 146.7 149 48.3
Nn1g01495 Nelumbo nucifera HOM05D000329 ORTHO05D000833 3.0e-33 145.6 149 51.0
AUR62017213 Chenopodium quinoa HOM05D000329 ORTHO05D000833 3.9e-33 145.2 148 50.7
Peaxi162Scf00119g00838 Petunia axillaris HOM05D000329 ORTHO05D000833 5.1e-33 144.8 149 44.3
Aa31LG2G810 Aethionema arabicum HOM05D000329 ORTHO05D000833 6.7e-33 144.4 141 49.6
THA.LOC104818027 Tarenaya hassleriana HOM05D000329 ORTHO05D000833 2.5e-32 142.5 142 49.3
AT1G63490 Arabidopsis thaliana HOM05D000329 ORTHO05D000833 4.3e-32 141.7 141 51.1
EL10Ac5g13077 Beta vulgaris HOM05D000329 ORTHO05D000833 4.3e-32 141.7 148 48.6
DCAR_006743 Daucus carota HOM05D000329 ORTHO05D000833 4.3e-32 141.7 149 47.0
Sopen08g029320 Solanum pennellii HOM05D000329 ORTHO05D000833 4.3e-32 141.7 148 45.9
Rhsim02G0228800 Rhododendron simsii HOM05D000329 ORTHO05D000833 7.4e-32 141.0 149 48.3
Solyc08g081000.3 Solanum lycopersicum HOM05D000329 ORTHO05D000833 9.6e-32 140.6 148 45.9
Eucgr.D01851 Eucalyptus grandis HOM05D000329 ORTHO05D000833 1.3e-31 140.2 147 49.0
Actinidia14555 Actinidia chinensis HOM05D000329 ORTHO05D000833 1.6e-31 139.8 149 47.0
CAN.G774.26 Capsicum annuum HOM05D000329 ORTHO05D000833 1.6e-31 139.8 149 47.0
Cc08_g14660 Coffea canephora HOM05D000329 ORTHO05D000833 1.6e-31 139.8 149 45.6
Carub.0002s0137 Capsella rubella HOM05D000329 ORTHO05D000833 2.8e-31 139.0 141 48.9
Sed0005725 Sechium edule HOM05D000329 ORTHO05D000833 3.7e-31 138.7 147 46.3
Migut.E01096 Erythranthe guttata HOM05D000329 ORTHO05D000833 6.2e-31 137.9 148 43.9
PSO210G7657 Papaver somniferum HOM05D000329 ORTHO05D000833 6.2e-31 137.9 149 47.7
Aqoxy5G04007 Aquilegia oxysepala HOM05D000329 ORTHO05D000833 8.1e-31 137.5 149 47.0
Thhalv10023217m.g Eutrema salsugineum HOM05D000329 ORTHO05D000833 8.1e-31 137.5 145 46.2
C09p16350 Brassica napus HOM05D000329 ORTHO05D000833 1.8e-30 136.3 145 46.9
BolC9t54546H Brassica oleracea HOM05D000329 ORTHO05D000833 1.8e-30 136.3 145 46.9
Nitab4.5_0003441g0110 Nicotiana tabacum HOM05D000329 ORTHO05D000833 2.4e-30 136.0 149 43.6
CARHR047880 Cardamine hirsuta HOM05D000329 ORTHO05D000833 4.0e-30 135.2 141 46.8
PSO302G0151 Papaver somniferum HOM05D000329 ORTHO05D000833 5.3e-30 134.8 149 46.3
Sp2g01130 Schrenkiella parvula HOM05D000329 ORTHO05D000833 5.3e-30 134.8 145 46.9
Actinidia02012 Actinidia chinensis HOM05D000329 ORTHO05D000833 1.2e-29 133.7 149 45.6
AL2G11730 Arabidopsis lyrata HOM05D000329 ORTHO05D000833 9.9e-29 130.6 137 47.4
A09p13680 Brassica napus HOM05D000329 ORTHO05D000833 2.2e-28 129.4 145 44.8
BraA09t37021Z Brassica rapa HOM05D000329 ORTHO05D000833 2.2e-28 129.4 145 44.8
MBI17_g28345_MAGBIO Magnolia biondii HOM05D000329 ORTHO05D000833 4.2e-27 125.2 149 45.6
CDE06G0038 Ceratophyllum demersum HOM05D000329 ORTHO05D000833 1.6e-26 123.2 143 44.8
SGA_v2.0_scaffold144G35947 Striga asiatica HOM05D000329 ORTHO05D000833 1.6e-26 123.2 149 39.6
ATR0680G104 Amborella trichopoda HOM05D000329 ORTHO05D000833 3.5e-26 122.1 146 45.2
Nitab4.5_0016308g0010 Nicotiana tabacum HOM05D000329 ORTHO05D000833 1.8e-25 119.8 122 43.4
Zm00001eb229050 Zea mays HOM05D000329 ORTHO05D000833 8.7e-25 117.5 145 40.7
Lj2A191G51 Lonicera japonica HOM05D000329 ORTHO05D000833 1.8e-22 109.8 109 48.6
Eucgr.J00708 Eucalyptus grandis HOM05D000329 ORTHO05D045324 1.5e-21 106.7 110 49.1
Eucgr.J00931 Eucalyptus grandis HOM05D000329 ORTHO05D045324 2.0e-21 106.3 174 36.8
Os06g0731600 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D000833 4.5e-21 105.1 147 37.4
Ah.12g057000 Amaranthus hybridus HOM05D000329 ORTHO05D000833 1.9e-19 99.8 111 48.6
SEGI_33192 Sequoiadendron giganteum HOM05D000329 ORTHO05D000833 1.0e-17 94.0 118 41.5
MELO3C005670.2 Cucumis melo HOM05D000329 ORTHO05D000833 1.8e-17 93.2 121 42.1
vmacro11324 Vaccinium macrocarpon HOM05D000329 ORTHO05D000833 3.1e-14 82.4 119 39.5
Mapoly0030s0125 Marchantia polymorpha HOM05D000329 ORTHO05D000833 2.1e-10 69.7 149 34.2
AagrBONN_evm.TU.Sc2ySwM_228.1951 Anthoceros agrestis HOM05D000329 ORTHO05D000833 2.7e-10 69.3 149 29.5
arahy.Tifrunner.gnm1.ann1.L9ZF54 Arachis hypogaea HOM05D000329 ORTHO05D082238 2.4e-06 56.2 118 37.3


User provided reference genes

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