Gene: PGR031G0355

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR031G0355
  • Transcript Identifier PGR031G0355.01
  • Gene Type Coding gene
  • Location NC_045127.1 : 48857405-48871199 : negative

Gene Family Information

  • ID HOM05D000329
  • #Genes/#Species 1418/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031381205.1
  • name LOC116195915
  • name XM_031525345.1
  • id gene-LOC116195915
  • uniprot A0A6P8CDW9

Descriptions

  • product lysine-specific demethylase 5B
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032259
IEA
GOA Databasemethylation
GO:0034721
ISO
PLAZA Integrative Orthologyhistone H3-K4 demethylation, trimethyl-H3-K4-specific AT1G63490
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT1G63490

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0008168
IEA
GOA Databasemethyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003347 JmjC domain
IPR004198 Zinc finger, C5HC2-type
IPR011011 Zinc finger, FYVE/PHD-type
IPR003349 JmjN domain
IPR019787 Zinc finger, PHD-finger
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR013637 Lysine-specific demethylase-like domain
IPR001606 ARID DNA-binding domain
IPR036431 ARID DNA-binding domain superfamily
IPR001965 Zinc finger, PHD-type
Mapman id Description
12.3.3.8.2 Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (KDM5)