Gene: HanXRQChr17g0533711
General Information
Structural Information
- Species Helianthus annuus
- Gene Identifier HanXRQChr17g0533711
- Transcript Identifier HanXRQChr17g0533711.r1.2.494
- Gene Type Coding gene
- Location HanXRQChr17 : 1255176-1265601 : positive
Gene Family Information
- ID HOM05D000329
- #Genes/#Species 1418/100
- Phylogenetic origin
- ID ORTHO05D000833
- #Genes/#Species 589/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id HanXRQChr17g0533711.r1.2
- pacid 40329093
Descriptions
- Description Putative ARID DNA-binding domain; JmjC domain; JmjN domain; Zinc finger, C5HC2-type; Zinc finger, RING/FYVE/PHD-type; Lysine-specific demethylase-like domain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0034721 | ISO | PLAZA Integrative Orthology | histone H3-K4 demethylation, trimethyl-H3-K4-specific | AT1G63490 |
GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT1G63490 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G63490 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR013083 | Zinc finger, RING/FYVE/PHD-type |
IPR001606 | ARID DNA-binding domain |
IPR013637 | Lysine-specific demethylase-like domain |
IPR036431 | ARID DNA-binding domain superfamily |
IPR001965 | Zinc finger, PHD-type |
IPR003349 | JmjN domain |
IPR019787 | Zinc finger, PHD-finger |
IPR011011 | Zinc finger, FYVE/PHD-type |
IPR004198 | Zinc finger, C5HC2-type |
IPR003347 | JmjC domain |
Mapman id | Description |
---|---|
12.3.3.8.2 | Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (KDM5) |