Gene: TPR.G6625

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G6625
  • Transcript Identifier TPR.T6861
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG2 : 30729871-30749279 : negative

Gene Family Information

  • ID HOM05D000329
  • #Genes/#Species 1418/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA6861.v2
  • id Tp57577_TGAC_v2_gene6625.v2
  • pacid 35973254
  • uniprot A0A2K3LVB0

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032259
IEA
GOA Databasemethylation
GO:0034721
ISO
PLAZA Integrative Orthologyhistone H3-K4 demethylation, trimethyl-H3-K4-specific AT1G63490
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT1G63490

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0008168
IEA
GOA Databasemethyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G63490

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036431 ARID DNA-binding domain superfamily
IPR004198 Zinc finger, C5HC2-type
IPR001606 ARID DNA-binding domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR019787 Zinc finger, PHD-finger
IPR003347 JmjC domain
IPR003349 JmjN domain
IPR011011 Zinc finger, FYVE/PHD-type
IPR001965 Zinc finger, PHD-type
IPR013637 Lysine-specific demethylase-like domain
Mapman id Description
12.3.3.8.2 Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (KDM5)