Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27592 Trifolium pratense HOM05D000924 ORTHO05D001209 1.1e-22 109.0 51 100.0
Ca_19995_v3 Cicer arietinum L. HOM05D000924 ORTHO05D001209 6.8e-17 89.7 42 100.0
FAN18G1430 Fragaria x ananassa HOM05D000924 ORTHO05D001209 6.8e-17 89.7 42 100.0
Glyma.06G202500 Glycine max HOM05D000924 ORTHO05D001209 6.8e-17 89.7 42 100.0
Lj1g0003461 Lotus japonicus HOM05D000924 ORTHO05D001209 6.8e-17 89.7 42 100.0
Medtr3g025300 Medicago truncatula HOM05D000924 ORTHO05D001209 6.8e-17 89.7 42 100.0
Prupe.4G035000 Prunus persica HOM05D000924 ORTHO05D001209 6.8e-17 89.7 42 100.0
QL10p019292 Quercus lobata HOM05D000924 ORTHO05D001209 6.8e-17 89.7 42 100.0
RcHm_v2.0_Chr7g0182981 Rosa chinensis HOM05D000924 ORTHO05D001209 6.8e-17 89.7 42 100.0
TPR.G12162 Trifolium pratense HOM05D000924 ORTHO05D001209 6.8e-17 89.7 42 100.0
MD06G1201900 Malus domestica HOM05D000924 ORTHO05D001209 8.9e-17 89.4 44 95.5
Cfa019322 Carpinus fangiana HOM05D000924 ORTHO05D001209 2.0e-16 88.2 42 97.6
Lalb_Chr14g0362841 Lupinus albus HOM05D000924 ORTHO05D001209 2.0e-16 88.2 42 97.6
Phvul.009G192100 Phaseolus vulgaris HOM05D000924 ORTHO05D001209 2.0e-16 88.2 42 97.6
ATR0064G009 Amborella trichopoda HOM05D000924 ORTHO05D001209 2.6e-16 87.8 42 97.6
Aqoxy3G03623 Aquilegia oxysepala HOM05D000924 ORTHO05D001209 2.6e-16 87.8 42 97.6
CANSAT80G0652 Cannabis sativa HOM05D000924 ORTHO05D001209 2.6e-16 87.8 42 97.6
CiPaw.11G052300 Carya illinoinensis HOM05D000924 ORTHO05D001209 2.6e-16 87.8 42 97.6
FvH4_5g13990 Fragaria vesca HOM05D000924 ORTHO05D001209 2.6e-16 87.8 42 97.6
TWI60G0107 Tripterygium wilfordii HOM05D000924 ORTHO05D001209 2.6e-16 87.8 42 97.6
GSVIVG01007875001 Vitis vinifera HOM05D000924 ORTHO05D001209 2.6e-16 87.8 42 97.6
Atru.chr9.419 Acer truncatum HOM05D000924 ORTHO05D001209 3.4e-16 87.4 42 97.6
Cpa.g.sc94.39 Carica papaya HOM05D000924 ORTHO05D001209 3.4e-16 87.4 42 97.6
Eucgr.B00583 Eucalyptus grandis HOM05D000924 ORTHO05D001209 3.4e-16 87.4 42 95.2
Thecc.03G100600 Theobroma cacao HOM05D000924 ORTHO05D001209 3.4e-16 87.4 42 97.6
COL.COLO4_06748 Corchorus olitorius HOM05D000924 ORTHO05D001209 4.4e-16 87.0 44 93.2
Ah.11g047880 Amaranthus hybridus HOM05D000924 ORTHO05D001209 7.6e-16 86.3 42 95.2
Haze_07712 Corylus avellana HOM05D000924 ORTHO05D001209 7.6e-16 86.3 42 95.2
Lj5C103G8 Lonicera japonica HOM05D000924 ORTHO05D001209 7.6e-16 86.3 42 95.2
Hund09903 Selenicereus undatus HOM05D000924 ORTHO05D001209 7.6e-16 86.3 42 95.2
Hund27624 Selenicereus undatus HOM05D000924 ORTHO05D001209 7.6e-16 86.3 42 95.2
PSO017G0961 Papaver somniferum HOM05D000924 ORTHO05D001209 9.9e-16 85.9 42 95.2
PSO478G0555 Papaver somniferum HOM05D000924 ORTHO05D001209 9.9e-16 85.9 42 95.2
Actinidia25776 Actinidia chinensis HOM05D000924 ORTHO05D001209 1.3e-15 85.5 42 95.2
arahy.Tifrunner.gnm1.ann1.QJ15ZQ Arachis hypogaea HOM05D000924 ORTHO05D001209 1.3e-15 85.5 42 95.2
arahy.Tifrunner.gnm1.ann1.TAYI6X Arachis hypogaea HOM05D000924 ORTHO05D001209 1.3e-15 85.5 42 95.2
Gohir.A12G182100 Gossypium hirsutum HOM05D000924 ORTHO05D001209 1.3e-15 85.5 42 95.2
Gorai.008G198400 Gossypium raimondii HOM05D000924 ORTHO05D001209 1.3e-15 85.5 42 95.2
Hma1.2p1_0060F.1_g033190 Hydrangea macrophylla HOM05D000924 ORTHO05D001209 1.3e-15 85.5 42 95.2
Manes.06G085400 Manihot esculenta HOM05D000924 ORTHO05D001209 1.3e-15 85.5 42 95.2
PGR083G0994 Punica granatum HOM05D000924 ORTHO05D001209 1.3e-15 85.5 42 92.9
THA.LOC104818343 Tarenaya hassleriana HOM05D000924 ORTHO05D001209 1.3e-15 85.5 42 95.2
ClCG04G011840 Citrullus lanatus HOM05D000924 ORTHO05D001209 1.7e-15 85.1 42 92.9
TAR622G0150 Trochodendron aralioides HOM05D000924 ORTHO05D001209 2.2e-15 84.7 42 92.9
Aa31LG11G2210 Aethionema arabicum HOM05D000924 ORTHO05D001209 2.9e-15 84.3 42 92.9
AL8G37790 Arabidopsis lyrata HOM05D000924 ORTHO05D001209 2.9e-15 84.3 42 92.9
AT5G61140 Arabidopsis thaliana HOM05D000924 ORTHO05D001209 2.9e-15 84.3 42 92.9
EL10Ac5g11118 Beta vulgaris HOM05D000924 ORTHO05D001209 2.9e-15 84.3 42 92.9
C02p61380 Brassica napus HOM05D000924 ORTHO05D001209 2.9e-15 84.3 42 92.9
BolC2t12187H Brassica oleracea HOM05D000924 ORTHO05D001209 2.9e-15 84.3 42 92.9
Thhalv10003505m.g Eutrema salsugineum HOM05D000924 ORTHO05D001209 2.9e-15 84.3 42 92.9
Os03g0213400 Oryza sativa ssp. japonica HOM05D000924 ORTHO05D001209 2.9e-15 84.3 42 92.9
Sp2g24390 Schrenkiella parvula HOM05D000924 ORTHO05D001209 2.9e-15 84.3 42 92.9
Carub.0008s2181 Capsella rubella HOM05D000924 ORTHO05D001209 3.8e-15 84.0 42 92.9
Dinv17404 Davidia involucrata HOM05D000924 ORTHO05D001209 3.8e-15 84.0 42 92.9
Duzib205G0140 Durio zibethinus HOM05D000924 ORTHO05D001209 3.8e-15 84.0 42 95.2
Nn4g23416 Nelumbo nucifera HOM05D000924 ORTHO05D001209 3.8e-15 84.0 42 90.5
Zm00001eb400270 Zea mays HOM05D000924 ORTHO05D001209 3.8e-15 84.0 42 92.9
MELO3C002023.2 Cucumis melo HOM05D000924 ORTHO05D001209 4.9e-15 83.6 42 90.5
CsaV3_1G005930 Cucumis sativus L. HOM05D000924 ORTHO05D001209 4.9e-15 83.6 42 90.5
Peaxi162Scf00013g00069 Petunia axillaris HOM05D000924 ORTHO05D001209 4.9e-15 83.6 42 92.9
SalBow7G1805 Salvia bowleyana HOM05D000924 ORTHO05D001209 4.9e-15 83.6 42 92.9
SGA_v2.0_scaffold7G04039 Striga asiatica HOM05D000924 ORTHO05D001209 4.9e-15 83.6 42 92.9
MSTRG.4451 Avicennia marina HOM05D000924 ORTHO05D001209 6.4e-15 83.2 42 90.5
CAN.G587.44 Capsicum annuum HOM05D000924 ORTHO05D001209 6.4e-15 83.2 42 90.5
Nitab4.5_0001688g0120 Nicotiana tabacum HOM05D000924 ORTHO05D001209 6.4e-15 83.2 42 90.5
Solyc06g069480.3 Solanum lycopersicum HOM05D000924 ORTHO05D001209 6.4e-15 83.2 42 90.5
Sopen06g026770 Solanum pennellii HOM05D000924 ORTHO05D001209 6.4e-15 83.2 42 90.5
A02p41450 Brassica napus HOM05D000924 ORTHO05D001209 8.4e-15 82.8 42 90.5
BraA02t09087Z Brassica rapa HOM05D000924 ORTHO05D001209 8.4e-15 82.8 42 90.5
CSS0010952 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D001209 8.4e-15 82.8 42 92.9
AUR62008516 Chenopodium quinoa HOM05D000924 ORTHO05D001209 8.4e-15 82.8 42 90.5
DCAR_011555 Daucus carota HOM05D000924 ORTHO05D001209 8.4e-15 82.8 42 90.5
CSS0043185 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D001209 1.1e-14 82.4 44 88.6
Gohir.D12G185001 Gossypium hirsutum HOM05D000924 ORTHO05D001209 1.1e-14 82.4 42 92.9
Potri.015G056501 Populus trichocarpa HOM05D000924 ORTHO05D001209 1.1e-14 82.4 42 88.1
CARHR274830 Cardamine hirsuta HOM05D000924 ORTHO05D001209 1.4e-14 82.0 42 90.5
Ciclev10018483m.g Citrus clementina HOM05D000924 ORTHO05D001209 1.4e-14 82.0 42 90.5
Rhsim08G0146700 Rhododendron simsii HOM05D000924 ORTHO05D001209 1.4e-14 82.0 42 88.1
Oeu031662.3 Olea europaea HOM05D000924 ORTHO05D001209 1.9e-14 81.6 42 90.5
Sc03g0008290 Simmondsia chinensis HOM05D000924 ORTHO05D001209 1.9e-14 81.6 42 88.1
CBR_g38192 Chara braunii HOM05D000924 ORTHO05D001209 2.4e-14 81.3 42 88.1
Lsat_1_v5_gn_5_22540 Lactuca sativa HOM05D000924 ORTHO05D001209 2.4e-14 81.3 42 90.5
AUR62021574 Chenopodium quinoa HOM05D000924 ORTHO05D001209 3.2e-14 80.9 42 88.1
Sed0023477 Sechium edule HOM05D000924 ORTHO05D001209 3.2e-14 80.9 42 88.1
vmacro17602 Vaccinium macrocarpon HOM05D000924 ORTHO05D001209 3.2e-14 80.9 42 88.1
CDE06G0248 Ceratophyllum demersum HOM05D000924 ORTHO05D001209 4.2e-14 80.5 42 88.1
Pp3c2_9850 Physcomitrium patens HOM05D000924 ORTHO05D001209 4.2e-14 80.5 42 85.7
Cc00_g02560 Coffea canephora HOM05D000924 ORTHO05D001209 5.4e-14 80.1 42 88.1
SMO116G0141 Selaginella moellendorffii HOM05D000924 ORTHO05D001209 5.4e-14 80.1 42 88.1
SMO195G0012 Selaginella moellendorffii HOM05D000924 ORTHO05D001209 5.4e-14 80.1 42 88.1
HPP92_009486 Vanilla planifolia HOM05D000924 ORTHO05D001209 5.4e-14 80.1 42 88.1
HPP92_009545 Vanilla planifolia HOM05D000924 ORTHO05D001209 5.4e-14 80.1 42 88.1
Migut.D01699 Erythranthe guttata HOM05D000924 ORTHO05D001209 7.1e-14 79.7 42 85.7
Mapoly0046s0099 Marchantia polymorpha HOM05D000924 ORTHO05D001209 7.1e-14 79.7 42 88.1
HanXRQChr05g0157291 Helianthus annuus HOM05D000924 ORTHO05D001209 9.2e-14 79.3 42 85.7
AagrBONN_evm.TU.Sc2ySwM_228.4663 Anthoceros agrestis HOM05D000924 ORTHO05D001209 1.2e-13 79.0 42 85.7
PRCOL_00000726 Prasinoderma coloniale HOM05D000924 ORTHO05D001209 6.9e-09 63.2 39 66.7
MCO14G361 Micromonas commoda HOM05D000924 ORTHO05D001209 7.6e-08 59.7 42 64.3
AagrBONN_evm.TU.Sc2ySwM_344.783 Anthoceros agrestis HOM05D000924 ORTHO05D001209 9.9e-08 59.3 40 67.5
Cfa026662 Carpinus fangiana HOM05D000924 ORTHO05D001209 2.9e-07 57.8 42 61.9
Manes.18G000900 Manihot esculenta HOM05D000924 ORTHO05D001209 8.4e-07 56.2 40 65.0
Manes.18G005100 Manihot esculenta HOM05D000924 ORTHO05D001209 8.4e-07 56.2 40 65.0
ClCG05G006710 Citrullus lanatus HOM05D000924 ORTHO05D001209 1.1e-06 55.8 40 65.0
ClCG05G013070 Citrullus lanatus HOM05D000924 ORTHO05D001209 1.9e-06 55.1 33 78.8
ClCG11G018370 Citrullus lanatus HOM05D000924 ORTHO05D001209 2.4e-06 54.7 40 65.0
MCO02G020 Micromonas commoda HOM05D000924 ORTHO05D001209 2.4e-06 54.7 36 63.9
TWI14G0143 Tripterygium wilfordii HOM05D000924 ORTHO05D001209 2.4e-06 54.7 40 65.0
EL10Ac2g02545 Beta vulgaris HOM05D000924 ORTHO05D001209 3.2e-06 54.3 40 65.0
Duzib128G1905 Durio zibethinus HOM05D000924 ORTHO05D001209 3.2e-06 54.3 40 65.0
Eucgr.F01825 Eucalyptus grandis HOM05D000924 ORTHO05D001209 3.2e-06 54.3 40 65.0
Gohir.A10G187300 Gossypium hirsutum HOM05D000924 ORTHO05D001209 3.2e-06 54.3 40 65.0
Gohir.D10G194400 Gossypium hirsutum HOM05D000924 ORTHO05D001209 3.2e-06 54.3 40 65.0
Gorai.011G217300 Gossypium raimondii HOM05D000924 ORTHO05D001209 3.2e-06 54.3 40 65.0
Lj5C314G2 Lonicera japonica HOM05D000924 ORTHO05D001209 3.2e-06 54.3 40 65.0
QL04p003238 Quercus lobata HOM05D000924 ORTHO05D001209 3.2e-06 54.3 40 62.5
Thecc.10G149400 Theobroma cacao HOM05D000924 ORTHO05D001209 3.2e-06 54.3 40 65.0
Nitab4.5_0001515g0080 Nicotiana tabacum HOM05D000924 ORTHO05D001209 4.2e-06 53.9 40 62.5
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 4.2e-06 53.9 40 62.5
DCAR_003081 Daucus carota HOM05D000924 ORTHO05D001209 5.4e-06 53.5 40 62.5
Atru.chr1.24 Acer truncatum HOM05D000924 ORTHO05D001209 7.1e-06 53.1 33 72.7
ATR0605G032 Amborella trichopoda HOM05D000924 ORTHO05D001209 7.1e-06 53.1 40 62.5
Aqoxy3G02568 Aquilegia oxysepala HOM05D000924 ORTHO05D001209 7.1e-06 53.1 40 62.5
Nitab4.5_0000520g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 7.1e-06 53.1 41 61.0
Nitab4.5_0007467g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 7.1e-06 53.1 41 61.0
Sabra15G0116500 Salix brachista HOM05D000924 ORTHO05D001209 7.1e-06 53.1 40 62.5
SGA_v2.0_scaffold161G37860 Striga asiatica HOM05D000924 ORTHO05D001209 7.1e-06 53.1 40 62.5
Ah.01g015930 Amaranthus hybridus HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
AT1G20960 Arabidopsis thaliana HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
arahy.Tifrunner.gnm1.ann1.1JT8J9 Arachis hypogaea HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
arahy.Tifrunner.gnm1.ann1.JY4JA5 Arachis hypogaea HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
arahy.Tifrunner.gnm1.ann1.L2QDU1 Arachis hypogaea HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
arahy.Tifrunner.gnm1.ann1.RS7A87 Arachis hypogaea HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
arahy.Tifrunner.gnm1.ann1.UPLP9N Arachis hypogaea HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
CAN.G1095.6 Capsicum annuum HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
Cpa.g.sc36.108 Carica papaya HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
CiPaw.07G131100 Carya illinoinensis HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
Ca_03699_v3 Cicer arietinum L. HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
MELO3C000166.2 Cucumis melo HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
CsaV3_3G015340 Cucumis sativus L. HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
Dinv10292 Davidia involucrata HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
Dinv32321 Davidia involucrata HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
Migut.N01909 Erythranthe guttata HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 60.0
Glyma.08G173500 Glycine max HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
Glyma.15G253800 Glycine max HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
Lj3g0017691 Lotus japonicus HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
Lalb_Chr25g0285181 Lupinus albus HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
Medtr2g064740 Medicago truncatula HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
Nn6g31594 Nelumbo nucifera HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
Peaxi162Scf00064g01426 Petunia axillaris HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
Phvul.005G055300 Phaseolus vulgaris HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
Psat2g149120 Pisum sativum HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
Potri.015G095500 Populus trichocarpa HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
PGR083G1659 Punica granatum HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
Rhsim06G0001600 Rhododendron simsii HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
SMO347G0607 Selaginella moellendorffii HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 60.0
Sc15g0004020 Simmondsia chinensis HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
Solyc06g082100.4 Solanum lycopersicum HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
Sopen06g033490 Solanum pennellii HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
PGSC0003DMG400030366 Solanum tuberosum HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
TPR.G40249 Trifolium pratense HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5
VMungo1080G0748 Vigna mungo HOM05D000924 ORTHO05D001209 9.3e-06 52.8 40 62.5


User provided reference genes

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