Gene: SGA_v2.0_scaffold7G04039
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold7G04039
- Transcript Identifier SGA_v2.0_scaffold7T04039
- Gene Type Coding gene
- Location scaffold7 : 3429644-3456775 : negative
Gene Family Information
- ID HOM05D000924
- #Genes/#Species 651/100
- Phylogenetic origin
- ID ORTHO05D001209
- #Genes/#Species 456/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product Activating signal cointegrator 1 complex subunit 3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0010228 | ISO | PLAZA Integrative Orthology | vegetative to reproductive phase transition of meristem | AT1G20960 |
GO:0006397 | ISO | PLAZA Integrative Orthology | mRNA processing | AT1G20960 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G20960 |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G61140 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT2G42270 |
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G20960 |
GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT1G20960 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
IPR036390 | Winged helix DNA-binding domain superfamily |
IPR003593 | AAA+ ATPase domain |
IPR036388 | Winged helix-like DNA-binding domain superfamily |
IPR001650 | Helicase, C-terminal |
IPR004179 | Sec63 domain |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
IPR011545 | DEAD/DEAH box helicase domain |
IPR014756 | Immunoglobulin E-set |
IPR035892 | C2 domain superfamily |
Mapman id | Description |
---|---|
16.2.7.1.4 | RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Brr2) |