Gene: AagrBONN_evm.TU.Sc2ySwM_228.4663

General Information

Structural Information

  • Species Anthoceros agrestis
  • Gene Identifier AagrBONN_evm.TU.Sc2ySwM_228.4663
  • Transcript Identifier AagrBONN_evm.model.Sc2ySwM_228.4663.3
  • Gene Type Coding gene
  • Location Sc2ySwM_228 : 20361421-20372856 : negative

Gene Family Information

  • ID HOM05D000924
  • #Genes/#Species 651/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name AagrBONN_EVM_Sc2ySwM_228.4663

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT1G20960
GO:0006397
ISO
PLAZA Integrative OrthologymRNA processing AT1G20960

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G20960
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G61140

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G42270
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G20960
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G20960

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001650 Helicase, C-terminal
IPR004179 Sec63 domain
IPR011545 DEAD/DEAH box helicase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR036390 Winged helix DNA-binding domain superfamily
IPR003593 AAA+ ATPase domain
IPR035892 C2 domain superfamily
Mapman id Description
16.2.7.1.4 RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Brr2)