Gene: Nitab4.5_0001515g0080
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0001515g0080
- Transcript Identifier Nitab4.5_0001515g0080.1
- Gene Type Coding gene
- Location Nitab4.5_0001515 : 412369-417220 : negative
Gene Family Information
- ID HOM05D000924
- #Genes/#Species 651/100
- Phylogenetic origin
- ID ORTHO05D001209
- #Genes/#Species 456/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Nitab4.5_0001515g0080.1
- SR1-identifier Nta16g11350.1
Descriptions
- Description Helicase, C-terminal, DNA/RNA helicase, DEAD/DEAH box type, N-terminal, Sec63 domain, Helicase, superfamily 1/2, ATP-binding domain, P-loop containing nucleoside triphosphate hydrolase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | InterPro | ATP binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001650 | Helicase, C-terminal |
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR035892 | C2 domain superfamily |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR004179 | Sec63 domain |
| IPR041094 | Brr2, N-terminal helicase PWI domain |
| Mapman id | Description |
|---|---|
| 16.2.7.1.4 | RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Brr2) |