Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0175 Trochodendron aralioides HOM05D000329 ORTHO05D000833 1.6e-263 912.1 451 100.0
Nn1g01495 Nelumbo nucifera HOM05D000329 ORTHO05D000833 4.9e-159 565.1 447 64.4
MBI17_g28345_MAGBIO Magnolia biondii HOM05D000329 ORTHO05D000833 1.3e-154 550.4 453 61.4
Aqoxy5G04007 Aquilegia oxysepala HOM05D000329 ORTHO05D000833 2.8e-146 522.7 449 59.7
GSVIVG01019761001 Vitis vinifera HOM05D000329 ORTHO05D000833 3.7e-146 522.3 432 63.4
CSS0031193 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D000833 7.1e-142 508.1 443 59.6
Actinidia14555 Actinidia chinensis HOM05D000329 ORTHO05D000833 4.8e-138 495.4 444 59.2
Actinidia02012 Actinidia chinensis HOM05D000329 ORTHO05D000833 6.2e-138 495.0 448 58.5
Rhsim02G0228800 Rhododendron simsii HOM05D000329 ORTHO05D000833 2.4e-137 493.0 450 57.8
Atru.chr9.2249 Acer truncatum HOM05D000329 ORTHO05D000833 4.9e-135 485.3 444 56.5
QL12p033243 Quercus lobata HOM05D000329 ORTHO05D000833 6.5e-135 485.0 439 57.9
QL12p034051 Quercus lobata HOM05D000329 ORTHO05D000833 6.5e-135 485.0 439 57.9
PSO210G7657 Papaver somniferum HOM05D000329 ORTHO05D000833 6.0e-133 478.4 449 55.2
CiPaw.12G093800 Carya illinoinensis HOM05D000329 ORTHO05D000833 1.8e-132 476.9 451 55.4
Cfa012174 Carpinus fangiana HOM05D000329 ORTHO05D000833 3.0e-132 476.1 442 54.5
AUR62017213 Chenopodium quinoa HOM05D000329 ORTHO05D000833 6.7e-132 474.9 447 55.0
EL10Ac5g13077 Beta vulgaris HOM05D000329 ORTHO05D000833 3.3e-131 472.6 447 54.6
PSO302G0151 Papaver somniferum HOM05D000329 ORTHO05D000833 5.7e-131 471.9 450 55.1
AUR62010670 Chenopodium quinoa HOM05D000329 ORTHO05D000833 1.3e-130 470.7 447 54.6
MD06G1081900 Malus domestica HOM05D000329 ORTHO05D000833 2.2e-130 469.9 442 56.8
Atru.chr9.2239 Acer truncatum HOM05D000329 ORTHO05D000833 4.8e-130 468.8 444 55.4
Ciclev10018462m.g Citrus clementina HOM05D000329 ORTHO05D000833 1.8e-129 466.8 448 53.3
Haze_08848 Corylus avellana HOM05D000329 ORTHO05D000833 4.1e-129 465.7 438 54.6
Sc01g0009540 Simmondsia chinensis HOM05D000329 ORTHO05D000833 1.0e-127 461.1 443 55.5
Prupe.5G099000 Prunus persica HOM05D000329 ORTHO05D000833 8.5e-127 458.0 448 53.8
MD14G1103700 Malus domestica HOM05D000329 ORTHO05D000833 4.2e-126 455.7 444 55.2
Cc08_g14660 Coffea canephora HOM05D000329 ORTHO05D000833 9.4e-126 454.5 488 49.4
TWI81G0989 Tripterygium wilfordii HOM05D000329 ORTHO05D000833 3.6e-125 452.6 444 51.6
Hund14803 Selenicereus undatus HOM05D000329 ORTHO05D000833 3.0e-124 449.5 445 53.5
Sabra03G0089600 Salix brachista HOM05D000329 ORTHO05D000833 7.4e-123 444.9 442 50.9
RcHm_v2.0_Chr7g0197841 Rosa chinensis HOM05D000329 ORTHO05D000833 5.3e-121 438.7 444 53.6
Nitab4.5_0010612g0010 Nicotiana tabacum HOM05D000329 ORTHO05D000833 2.0e-120 436.8 442 52.5
Lj2A191G51 Lonicera japonica HOM05D000329 ORTHO05D000833 1.3e-119 434.1 396 55.8
Thecc.03G277900 Theobroma cacao HOM05D000329 ORTHO05D000833 1.3e-119 434.1 448 51.6
FAN04G0379 Fragaria x ananassa HOM05D000329 ORTHO05D000833 1.7e-119 433.7 448 53.1
FAN08G1575 Fragaria x ananassa HOM05D000329 ORTHO05D000833 2.2e-119 433.3 448 52.2
FAN13G2110 Fragaria x ananassa HOM05D000329 ORTHO05D000833 2.2e-119 433.3 448 52.7
FvH4_5g02310 Fragaria vesca HOM05D000329 ORTHO05D000833 8.5e-119 431.4 448 52.7
Manes.01G061050 Manihot esculenta HOM05D000329 ORTHO05D000833 1.4e-118 430.6 449 50.3
Nitab4.5_0003441g0110 Nicotiana tabacum HOM05D000329 ORTHO05D000833 9.4e-118 427.9 445 51.0
PGSC0003DMG400012211 Solanum tuberosum HOM05D000329 ORTHO05D000833 9.4e-118 427.9 445 51.9
QL12p034092 Quercus lobata HOM05D000329 ORTHO05D000833 1.2e-117 427.6 427 54.6
Eucgr.D01851 Eucalyptus grandis HOM05D000329 ORTHO05D000833 1.0e-116 424.5 449 49.2
Solyc08g081000.3 Solanum lycopersicum HOM05D000329 ORTHO05D000833 1.0e-116 424.5 445 51.0
Sopen08g029320 Solanum pennellii HOM05D000329 ORTHO05D000833 2.0e-115 420.2 445 50.6
CAN.G774.26 Capsicum annuum HOM05D000329 ORTHO05D000833 4.8e-114 415.6 442 50.0
MSTRG.13841 Avicennia marina HOM05D000329 ORTHO05D000833 3.1e-113 412.9 444 49.5
Migut.E01096 Erythranthe guttata HOM05D000329 ORTHO05D000833 4.1e-113 412.5 446 48.7
Oeu009171.4 Olea europaea HOM05D000329 ORTHO05D000833 7.0e-113 411.8 448 49.1
DCAR_006743 Daucus carota HOM05D000329 ORTHO05D000833 1.2e-112 411.0 451 51.2
Glyma.01G219800 Glycine max HOM05D000329 ORTHO05D000833 1.5e-112 410.6 442 50.5
ClCG01G002770 Citrullus lanatus HOM05D000329 ORTHO05D000833 1.3e-111 407.5 446 47.3
Glyma.11G023700 Glycine max HOM05D000329 ORTHO05D000833 1.9e-110 403.7 442 50.2
Phvul.002G157500 Phaseolus vulgaris HOM05D000329 ORTHO05D000833 1.2e-109 401.0 443 48.8
arahy.Tifrunner.gnm1.ann1.6V6FMV Arachis hypogaea HOM05D000329 ORTHO05D000833 6.1e-109 398.7 454 47.8
HanXRQChr17g0533711 Helianthus annuus HOM05D000329 ORTHO05D000833 5.2e-108 395.6 442 48.9
FAN18G0976 Fragaria x ananassa HOM05D000329 ORTHO05D000833 1.5e-107 394.0 416 52.6
arahy.Tifrunner.gnm1.ann1.AJP7R9 Arachis hypogaea HOM05D000329 ORTHO05D000833 7.4e-107 391.7 456 46.5
Gorai.004G211700 Gossypium raimondii HOM05D000329 ORTHO05D000833 1.3e-106 391.0 453 48.3
LjContig00312_ERROPOS870357g0009147 Lotus japonicus HOM05D000329 ORTHO05D000833 2.8e-106 389.8 445 49.2
Lalb_Chr09g0321021 Lupinus albus HOM05D000329 ORTHO05D000833 4.8e-106 389.0 448 49.3
CsaV3_5G002860 Cucumis sativus L. HOM05D000329 ORTHO05D000833 6.3e-106 388.7 447 44.7
VMungo1215G1167 Vigna mungo HOM05D000329 ORTHO05D000833 2.4e-105 386.7 443 47.2
QL12p034121 Quercus lobata HOM05D000005 ORTHO05D000833 3.1e-105 386.3 339 60.8
Duzib068G0085 Durio zibethinus HOM05D000329 ORTHO05D000833 5.3e-105 385.6 457 49.0
Gohir.D08G200900 Gossypium hirsutum HOM05D000329 ORTHO05D000833 1.2e-104 384.4 453 47.7
Gohir.A08G182350 Gossypium hirsutum HOM05D000329 ORTHO05D000833 3.5e-104 382.9 453 47.7
ECA246G1250 Erigeron canadensis HOM05D000329 ORTHO05D000833 5.9e-104 382.1 398 51.3
PGR031G0355 Punica granatum HOM05D000329 ORTHO05D000833 7.7e-104 381.7 449 47.2
TPR.G6625 Trifolium pratense HOM05D000329 ORTHO05D000833 7.2e-102 375.2 442 45.7
Psat2g182320 Pisum sativum HOM05D000329 ORTHO05D000833 8.0e-101 371.7 442 46.6
Medtr5g010300 Medicago truncatula HOM05D000329 ORTHO05D000833 6.7e-100 368.6 449 45.7
Peaxi162Scf00119g00838 Petunia axillaris HOM05D000329 ORTHO05D000833 1.2e-96 357.8 443 47.9
Sed0005725 Sechium edule HOM05D000329 ORTHO05D000833 2.0e-96 357.1 381 47.5
Ah.12g057000 Amaranthus hybridus HOM05D000329 ORTHO05D000833 5.9e-96 355.5 461 42.5
COL.COLO4_34455 Corchorus olitorius HOM05D000329 ORTHO05D000833 5.0e-95 352.4 357 51.0
CDE06G0648 Ceratophyllum demersum HOM05D000329 ORTHO05D000833 1.3e-90 337.8 414 44.0
THA.LOC104818027 Tarenaya hassleriana HOM05D000329 ORTHO05D000833 6.3e-90 335.5 444 42.8
ATR0680G104 Amborella trichopoda HOM05D000329 ORTHO05D000833 8.3e-90 335.1 455 44.4
MELO3C005670.2 Cucumis melo HOM05D000329 ORTHO05D000833 4.7e-85 319.3 480 39.8
vmacro11324 Vaccinium macrocarpon HOM05D000329 ORTHO05D000833 5.0e-79 299.3 450 41.6
Lsat_1_v5_gn_3_7360 Lactuca sativa HOM05D000329 ORTHO05D000833 1.9e-78 297.4 450 40.0
Ca_24553_v3 Cicer arietinum L. HOM05D000329 ORTHO05D000833 4.1e-73 279.6 467 39.4
Zm00001eb229050 Zea mays HOM05D000329 ORTHO05D000833 3.5e-72 276.6 432 39.1
QL12p033457 Quercus lobata HOM05D000005 ORTHO05D000012 8.6e-71 271.9 316 50.9
SEGI_23393 Sequoiadendron giganteum HOM05D000329 ORTHO05D000833 6.4e-66 255.8 370 38.1
SGA_v2.0_scaffold144G35947 Striga asiatica HOM05D000329 ORTHO05D000833 3.9e-63 246.5 449 37.9
DCAR_017358 Daucus carota HOM05D000329 ORTHO05D000833 2.1e-61 240.7 212 57.1
AagrBONN_evm.TU.Sc2ySwM_228.1951 Anthoceros agrestis HOM05D000329 ORTHO05D000833 1.1e-52 211.8 352 35.8
Mapoly0030s0125 Marchantia polymorpha HOM05D000329 ORTHO05D000833 5.2e-52 209.5 357 35.9
Dinv38948 Davidia involucrata HOM05D000329 ORTHO05D000833 4.6e-48 196.4 182 56.6
QL12p033282 Quercus lobata HOM05D000005 ORTHO05D000012 3.0e-47 193.7 230 48.7
Carub.0002s0137 Capsella rubella HOM05D000329 ORTHO05D000833 1.2e-40 171.8 355 35.8
AT1G63490 Arabidopsis thaliana HOM05D000329 ORTHO05D000833 3.9e-39 166.8 253 38.7
Aa31LG2G810 Aethionema arabicum HOM05D000329 ORTHO05D000833 2.5e-38 164.1 208 43.3
AL2G11730 Arabidopsis lyrata HOM05D000329 ORTHO05D000833 1.6e-37 161.4 234 39.3
A09p13680 Brassica napus HOM05D000329 ORTHO05D000833 1.1e-36 158.7 234 38.9
BraA09t37021Z Brassica rapa HOM05D000329 ORTHO05D000833 1.1e-36 158.7 234 38.9
Thhalv10023217m.g Eutrema salsugineum HOM05D000329 ORTHO05D000833 1.4e-36 158.3 227 37.9
CARHR047880 Cardamine hirsuta HOM05D000329 ORTHO05D000833 1.2e-35 155.2 253 36.8
C09p16350 Brassica napus HOM05D000329 ORTHO05D000833 1.5e-35 154.8 234 38.9
BolC9t54546H Brassica oleracea HOM05D000329 ORTHO05D000833 1.5e-35 154.8 234 38.9
QL12p033333 Quercus lobata HOM05D000329 ORTHO05D000833 3.7e-29 133.7 133 57.1
Cpa.g.sc74.24 Carica papaya HOM05D000329 ORTHO05D000833 4.8e-29 133.3 155 50.3
QL12p033493 Quercus lobata HOM05D000005 ORTHO05D000012 2.7e-24 117.5 100 61.0
Cpa.g.sc74.26 Carica papaya HOM05D000329 ORTHO05D000833 1.8e-23 114.8 144 44.4
PRCOL_00007006 Prasinoderma coloniale HOM05D000329 ORTHO05D000833 2.8e-21 107.5 313 26.2
Cre12.g514250 Chlamydomonas reinhardtii HOM05D000329 ORTHO05D000833 5.8e-19 99.8 343 24.2
MCO16G013 Micromonas commoda HOM05D000329 ORTHO05D000833 3.2e-17 94.0 151 32.5
TAR636G3626 Trochodendron aralioides HOM05D000329 ORTHO05D000833 4.2e-17 93.6 52 90.4
QL12p034180 Quercus lobata HOM05D000005 ORTHO05D000012 2.1e-16 91.3 87 54.0
Pp3c21_10520 Physcomitrium patens HOM05D000329 ORTHO05D000833 5.9e-11 73.2 63 52.4
Haze_06898 Corylus avellana HOM05D002400 ORTHO05D002568 3.3e-06 57.4 48 52.1
BolC1t05958H Brassica oleracea HOM05D003353 ORTHO05D003751 7.4e-06 56.2 134 30.6


User provided reference genes

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