Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0058 Trochodendron aralioides HOM05D006129 ORTHO05D007446 5.6e-209 730.7 372 100.0
TAR371G0476 Trochodendron aralioides HOM05D006129 ORTHO05D007446 2.4e-196 688.7 405 88.6
Nn4g23272 Nelumbo nucifera HOM05D006129 ORTHO05D007446 2.2e-141 506.1 410 67.3
TAR371G0992 Trochodendron aralioides HOM05D006129 ORTHO05D007446 8.3e-120 434.5 312 73.7
Dinv42121 Davidia involucrata HOM05D006129 ORTHO05D007446 4.1e-119 432.2 360 63.9
Dinv23594 Davidia involucrata HOM05D006129 ORTHO05D007446 5.4e-119 431.8 334 67.7
GSVIVG01031785001 Vitis vinifera HOM05D006129 ORTHO05D007446 1.4e-111 407.1 372 60.2
CSS0025307 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 8.6e-109 397.9 410 57.1
CSS0048591 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 8.6e-109 397.9 410 57.1
Haze_01881 Corylus avellana HOM05D006129 ORTHO05D007446 7.3e-108 394.8 402 57.0
Gorai.002G007000 Gossypium raimondii HOM05D006129 ORTHO05D007446 9.5e-108 394.4 397 55.9
Cfa005424 Carpinus fangiana HOM05D006129 ORTHO05D007446 1.6e-107 393.7 404 56.9
Gohir.D01G006000 Gossypium hirsutum HOM05D006129 ORTHO05D007446 3.6e-107 392.5 403 56.8
MD10G1089000 Malus domestica HOM05D006129 ORTHO05D007446 6.1e-107 391.7 414 56.0
QL11p038411 Quercus lobata HOM05D006129 ORTHO05D007446 8.0e-107 391.3 418 56.2
TWI31G0609 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 8.0e-107 391.3 419 54.9
Prupe.8G116000 Prunus persica HOM05D006129 ORTHO05D007446 8.9e-106 387.9 370 58.9
Gohir.A01G005900 Gossypium hirsutum HOM05D006129 ORTHO05D007446 1.5e-105 387.1 401 55.9
TWI79G0519 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 1.5e-105 387.1 379 58.0
CANSAT25G2181 Cannabis sativa HOM05D006129 ORTHO05D007446 2.0e-105 386.7 402 54.2
Duzib248G0151 Durio zibethinus HOM05D006129 ORTHO05D007446 5.7e-105 385.2 411 54.7
CiPaw.05G055300 Carya illinoinensis HOM05D006129 ORTHO05D007446 7.5e-105 384.8 414 54.6
RcHm_v2.0_Chr6g0259211 Rosa chinensis HOM05D006129 ORTHO05D007446 6.4e-104 381.7 364 58.5
Thecc.02G095400 Theobroma cacao HOM05D006129 ORTHO05D007446 8.3e-104 381.3 411 53.8
Lj5P206T15 Lonicera japonica HOM05D006129 ORTHO05D007446 2.4e-103 379.8 383 56.7
Aqoxy3G03484 Aquilegia oxysepala HOM05D006129 ORTHO05D007446 3.5e-102 375.9 406 53.7
COL.COLO4_11724 Corchorus olitorius HOM05D006129 ORTHO05D007446 3.5e-102 375.9 301 64.1
Manes.17G094600 Manihot esculenta HOM05D006129 ORTHO05D007446 1.0e-101 374.4 390 53.1
Ciclev10027854m.g Citrus clementina HOM05D006129 ORTHO05D007446 1.3e-101 374.0 338 58.6
Atru.BG.82.p Acer truncatum HOM05D006129 ORTHO05D007446 5.0e-101 372.1 265 69.1
FvH4_2g06900 Fragaria vesca HOM05D006129 ORTHO05D007446 4.3e-100 369.0 306 62.4
FAN15G2181 Fragaria x ananassa HOM05D006129 ORTHO05D007446 5.6e-100 368.6 290 64.5
FAN24G2628 Fragaria x ananassa HOM05D006129 ORTHO05D007446 5.6e-100 368.6 306 62.4
FAN27G0179 Fragaria x ananassa HOM05D006129 ORTHO05D007446 5.6e-100 368.6 351 57.5
Potri.009G106800 Populus trichocarpa HOM05D006129 ORTHO05D007446 5.6e-100 368.6 380 55.3
Lalb_Chr10g0095451 Lupinus albus HOM05D006129 ORTHO05D007446 1.6e-99 367.1 333 58.9
Eucgr.L00820 Eucalyptus grandis HOM05D006129 ORTHO05D007446 4.7e-99 365.5 406 52.7
Lsat_1_v5_gn_5_113460 Lactuca sativa HOM05D006129 ORTHO05D007446 1.8e-98 363.6 390 53.8
Cpa.g.sc62.53 Carica papaya HOM05D006129 ORTHO05D007446 4.0e-98 362.5 417 52.0
PGR042G1055 Punica granatum HOM05D006129 ORTHO05D007446 1.5e-97 360.5 376 54.0
CDE04G1903 Ceratophyllum demersum HOM05D006129 ORTHO05D007446 2.6e-97 359.8 274 65.0
MELO3C026699.2 Cucumis melo HOM05D006129 ORTHO05D007446 2.6e-97 359.8 373 55.2
Lj2g0010354 Lotus japonicus HOM05D006129 ORTHO05D007446 9.8e-97 357.8 335 57.6
Sabra09G0081600 Salix brachista HOM05D006129 ORTHO05D007446 9.8e-97 357.8 271 65.7
Sed0004701 Sechium edule HOM05D006129 ORTHO05D007446 1.3e-96 357.5 388 51.8
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 1.7e-96 357.1 414 51.9
CsaV3_3G028800 Cucumis sativus L. HOM05D006129 ORTHO05D007446 1.1e-95 354.4 373 54.7
Sc08g0000140 Simmondsia chinensis HOM05D006129 ORTHO05D007446 1.1e-95 354.4 363 55.4
Rhsim11G0169300 Rhododendron simsii HOM05D006129 ORTHO05D007446 3.2e-95 352.8 388 52.8
arahy.Tifrunner.gnm1.ann1.769PPM Arachis hypogaea HOM05D006129 ORTHO05D007446 2.7e-94 349.7 317 58.0
Migut.B00306 Erythranthe guttata HOM05D006129 ORTHO05D007446 4.6e-94 349.0 329 56.2
vmacro02172 Vaccinium macrocarpon HOM05D006129 ORTHO05D007446 4.6e-94 349.0 349 55.3
ATR0665G475 Amborella trichopoda HOM05D006129 ORTHO05D007446 1.7e-93 347.1 255 64.3
CARHR106180 Cardamine hirsuta HOM05D006129 ORTHO05D007446 1.1e-92 344.4 399 50.4
Hund00318 Selenicereus undatus HOM05D006129 ORTHO05D007446 1.5e-92 344.0 315 56.5
SGA_v2.0_scaffold58G20604 Striga asiatica HOM05D006129 ORTHO05D007446 2.5e-92 343.2 351 52.1
Ca_13480_v3 Cicer arietinum L. HOM05D006129 ORTHO05D007446 2.8e-91 339.7 360 53.3
TPR.G26422 Trifolium pratense HOM05D006129 ORTHO05D007446 3.6e-91 339.3 372 51.6
Medtr1g026035 Medicago truncatula HOM05D006129 ORTHO05D007446 8.1e-91 338.2 384 52.1
DCAR_003623 Daucus carota HOM05D006129 ORTHO05D007446 1.4e-90 337.4 348 54.6
MSTRG.20134 Avicennia marina HOM05D006129 ORTHO05D007446 1.8e-90 337.0 333 54.7
THA.LOC104807348 Tarenaya hassleriana HOM05D006129 ORTHO05D007446 2.3e-90 336.7 412 49.8
Glyma.20G009700 Glycine max HOM05D006129 ORTHO05D007446 3.1e-90 336.3 260 63.5
Oeu057674.1 Olea europaea HOM05D006129 ORTHO05D007446 4.0e-90 335.9 314 56.7
HanXRQChr10g0303221 Helianthus annuus HOM05D006129 ORTHO05D007446 6.8e-90 335.1 390 50.5
Glyma.07G178800 Glycine max HOM05D006129 ORTHO05D007446 2.6e-89 333.2 269 61.0
Nitab4.5_0007303g0010 Nicotiana tabacum HOM05D006129 ORTHO05D007446 3.4e-89 332.8 360 50.3
Solyc11g066850.3 Solanum lycopersicum HOM05D006129 ORTHO05D007446 4.4e-89 332.4 342 51.8
Peaxi162Scf00789g00530 Petunia axillaris HOM05D006129 ORTHO05D007446 7.5e-89 331.6 346 49.7
Aa31LG8G13380 Aethionema arabicum HOM05D006129 ORTHO05D007446 2.2e-88 330.1 412 48.8
ECA234G4125 Erigeron canadensis HOM05D006129 ORTHO05D007446 2.9e-88 329.7 327 53.2
VMungo0464G0688 Vigna mungo HOM05D006129 ORTHO05D007446 4.9e-88 328.9 386 49.0
Phvul.002G308800 Phaseolus vulgaris HOM05D006129 ORTHO05D007446 6.4e-88 328.6 269 59.9
Carub.0003s2972 Capsella rubella HOM05D006129 ORTHO05D007446 1.9e-87 327.0 412 46.6
Nitab4.5_0001453g0090 Nicotiana tabacum HOM05D006129 ORTHO05D007446 2.4e-87 326.6 381 48.3
BcaC06g36090 Brassica carinata HOM05D006129 ORTHO05D007446 4.1e-87 325.9 337 51.9
C07p07940 Brassica napus HOM05D006129 ORTHO05D007446 4.1e-87 325.9 337 51.9
BolC7t41212H Brassica oleracea HOM05D006129 ORTHO05D007446 4.1e-87 325.9 337 51.9
Zm00001eb251880 Zea mays HOM05D006129 ORTHO05D007446 4.1e-87 325.9 356 51.1
AL3G47590 Arabidopsis lyrata HOM05D006129 ORTHO05D007446 7.1e-87 325.1 419 47.0
BraA07t28289Z Brassica rapa HOM05D006129 ORTHO05D007446 7.1e-87 325.1 337 52.2
Sp3g29130 Schrenkiella parvula HOM05D006129 ORTHO05D007446 7.1e-87 325.1 426 46.7
HPP92_022045 Vanilla planifolia HOM05D006129 ORTHO05D007446 7.1e-87 325.1 307 55.7
AT2G15820 Arabidopsis thaliana HOM05D006129 ORTHO05D007446 1.2e-86 324.3 412 47.1
A07p04960 Brassica napus HOM05D006129 ORTHO05D007446 2.7e-86 323.2 395 47.8
unitig_744.g24241 Utricularia gibba HOM05D006129 ORTHO05D007446 2.7e-86 323.2 319 52.7
CAN.G644.34 Capsicum annuum HOM05D006129 ORTHO05D007446 7.8e-86 321.6 265 58.9
BcaB03g16332 Brassica carinata HOM05D006129 ORTHO05D007446 1.7e-85 320.5 389 48.8
Eucgr.L01320 Eucalyptus grandis HOM05D006129 ORTHO05D007446 1.7e-85 320.5 416 49.3
EL10Ac9g21818 Beta vulgaris HOM05D006129 ORTHO05D007446 3.9e-85 319.3 303 55.4
Os02g0702000 Oryza sativa ssp. japonica HOM05D006129 ORTHO05D007446 5.1e-85 318.9 354 49.4
Thhalv10022548m.g Eutrema salsugineum HOM05D006129 ORTHO05D007446 6.6e-85 318.5 403 47.1
AUR62016636 Chenopodium quinoa HOM05D006129 ORTHO05D007446 5.6e-84 315.5 320 52.8
Psat6g001360 Pisum sativum HOM05D006129 ORTHO05D007446 3.6e-83 312.8 263 61.2
AUR62011424 Chenopodium quinoa HOM05D006129 ORTHO05D007446 4.0e-82 309.3 362 48.9
Ah.01g006750 Amaranthus hybridus HOM05D006129 ORTHO05D007446 1.1e-79 301.2 361 46.8
Actinidia12976 Actinidia chinensis HOM05D006129 ORTHO05D007446 3.4e-73 279.6 415 44.3
FAN20G2787 Fragaria x ananassa HOM05D006129 ORTHO05D007446 3.2e-71 273.1 167 79.0
Atru.chr5.2881 Acer truncatum HOM05D006129 ORTHO05D007446 5.4e-71 272.3 307 49.2
SEGI_31419 Sequoiadendron giganteum HOM05D006129 ORTHO05D007446 7.8e-70 268.5 259 52.5
Atru.chr5.2887 Acer truncatum HOM05D006129 ORTHO05D007446 1.6e-67 260.8 320 46.9
PGSC0003DMG400026525 Solanum tuberosum HOM05D006129 ORTHO05D007446 1.6e-67 260.8 224 58.0
Atru.chr5.2826 Acer truncatum HOM05D006129 ORTHO05D007446 4.8e-67 259.2 383 43.1
Sopen11g026560 Solanum pennellii HOM05D006129 ORTHO05D007446 1.8e-66 257.3 224 57.1
Atru.chr5.2823 Acer truncatum HOM05D006129 ORTHO05D007446 4.5e-65 252.7 256 53.5
Medtr0381s0010 Medicago truncatula HOM05D006129 ORTHO05D007446 3.0e-61 240.0 175 65.1
QL11p038542 Quercus lobata HOM05D006129 ORTHO05D007446 2.4e-55 220.3 152 74.3
TAR629G1168 Trochodendron aralioides HOM05D006129 ORTHO05D007446 4.8e-51 206.1 111 90.1
TAR629G1760 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.9e-47 194.1 186 60.2
Eucgr.G01504 Eucalyptus grandis HOM05D006129 ORTHO05D007446 1.0e-32 145.2 383 33.7
AagrBONN_evm.TU.Sc2ySwM_344.1734 Anthoceros agrestis HOM05D006129 ORTHO05D007446 8.2e-27 125.6 229 31.4
AagrBONN_evm.TU.Sc2ySwM_344.5085 Anthoceros agrestis HOM05D006129 ORTHO05D007446 2.6e-25 120.6 210 34.3
Mapoly0036s0055 Marchantia polymorpha HOM05D006129 ORTHO05D007446 3.4e-25 120.2 247 30.0
Pp3c25_10050 Physcomitrium patens HOM05D006129 ORTHO05D007446 5.9e-25 119.4 253 29.6
Cc02_g18430 Coffea canephora HOM05D006129 ORTHO05D007446 7.2e-23 112.5 120 48.3
Pp3c16_23700 Physcomitrium patens HOM05D006129 ORTHO05D007446 3.0e-21 107.1 244 30.7
SMO356G0628 Selaginella moellendorffii HOM05D006129 ORTHO05D007446 1.1e-20 105.1 254 26.0
arahy.Tifrunner.gnm1.ann1.SUMB0F Arachis hypogaea HOM05D006129 ORTHO05D007446 7.4e-20 102.4 179 38.5
QL11p038477 Quercus lobata HOM05D006129 ORTHO05D007446 1.7e-19 101.3 208 40.4
Atru.chr5.2820 Acer truncatum HOM05D006129 ORTHO05D007446 4.2e-15 86.7 88 48.9
RcHm_v2.0_Chr6g0302241 Rosa chinensis HOM05D006129 ORTHO05D007446 5.5e-15 86.3 51 74.5
RcHm_v2.0_Chr1g0376021 Rosa chinensis HOM05D006129 ORTHO05D007446 3.0e-13 80.5 52 69.2
RcHm_v2.0_Chr2g0152801 Rosa chinensis HOM05D006129 ORTHO05D007446 5.7e-12 76.3 53 69.8


User provided reference genes

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