Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g39050 Schrenkiella parvula HOM05D006093 ORTHO05D007652 7.1e-186 654.1 396 100.0
Thhalv10011553m.g Eutrema salsugineum HOM05D006093 ORTHO05D007652 1.7e-168 596.3 398 92.0
BcaC08g43998 Brassica carinata HOM05D006093 ORTHO05D007652 6.4e-163 577.8 301 96.0
BolC6t36581H Brassica oleracea HOM05D006093 ORTHO05D007652 4.2e-162 575.1 301 95.3
A05p18970 Brassica napus HOM05D006093 ORTHO05D007652 6.0e-161 571.2 336 91.7
BraA05t20794Z Brassica rapa HOM05D006093 ORTHO05D007652 6.0e-161 571.2 336 91.7
Carub.0001s4146 Capsella rubella HOM05D006093 ORTHO05D007652 7.9e-161 570.9 435 74.9
AT1G52500 Arabidopsis thaliana HOM05D006093 ORTHO05D007652 2.4e-157 559.3 303 92.4
BcaB02g10988 Brassica carinata HOM05D006093 ORTHO05D007652 4.0e-157 558.5 397 86.6
Aa31LG10G2500 Aethionema arabicum HOM05D006093 ORTHO05D007652 2.4e-154 549.3 363 81.5
THA.LOC104818014 Tarenaya hassleriana HOM05D006093 ORTHO05D007652 1.3e-150 537.0 343 83.7
Duzib235G0399 Durio zibethinus HOM05D006093 ORTHO05D007652 8.8e-136 487.6 339 75.8
Ciclev10025737m.g Citrus clementina HOM05D006093 ORTHO05D007652 4.3e-135 485.3 344 73.3
Hma1.2p1_0017F.1_g011320 Hydrangea macrophylla HOM05D006093 ORTHO05D007652 5.7e-135 485.0 302 79.5
CSS0022367 Camellia sinensis var. sinensis HOM05D006093 ORTHO05D007652 1.7e-134 483.4 334 74.9
Manes.11G058700 Manihot esculenta HOM05D006093 ORTHO05D007652 4.8e-134 481.9 346 75.4
Gohir.D10G082500 Gossypium hirsutum HOM05D006093 ORTHO05D007652 1.4e-133 480.3 297 80.8
Atru.chr1.2881 Acer truncatum HOM05D006093 ORTHO05D007652 2.4e-133 479.6 344 75.9
Thecc.06G031100 Theobroma cacao HOM05D006093 ORTHO05D007652 3.1e-133 479.2 297 80.8
Lalb_Chr24g0395421 Lupinus albus HOM05D006093 ORTHO05D007652 5.3e-133 478.4 341 71.0
COL.COLO4_11898 Corchorus olitorius HOM05D006093 ORTHO05D007652 9.1e-133 477.6 344 75.6
TAR626G1009 Trochodendron aralioides HOM05D006093 ORTHO05D007652 9.1e-133 477.6 303 77.6
arahy.Tifrunner.gnm1.ann1.5T1ZSX Arachis hypogaea HOM05D006093 ORTHO05D007652 1.5e-132 476.9 285 81.4
arahy.Tifrunner.gnm1.ann1.RDN84X Arachis hypogaea HOM05D006093 ORTHO05D007652 1.5e-132 476.9 285 81.4
PSO170G6797 Papaver somniferum HOM05D006093 ORTHO05D007652 5.9e-132 474.9 341 72.1
FAN14G2225 Fragaria x ananassa HOM05D006093 ORTHO05D007652 2.9e-131 472.6 340 70.3
Lj3g0003829 Lotus japonicus HOM05D006093 ORTHO05D007652 3.8e-131 472.2 342 71.1
RcHm_v2.0_Chr2g0134861 Rosa chinensis HOM05D006093 ORTHO05D007652 5.0e-131 471.9 340 70.9
Eucgr.F03905 Eucalyptus grandis HOM05D006093 ORTHO05D007652 6.5e-131 471.5 295 76.3
TPR.G37262 Trifolium pratense HOM05D006093 ORTHO05D007652 6.5e-131 471.5 330 70.9
FvH4_6g29401 Fragaria vesca HOM05D006093 ORTHO05D007652 2.5e-130 469.5 340 70.0
Potri.003G031100 Populus trichocarpa HOM05D006093 ORTHO05D007652 3.2e-130 469.2 349 73.6
MD17G1215000 Malus domestica HOM05D006093 ORTHO05D007652 1.2e-129 467.2 294 77.9
CiPaw.01G249800 Carya illinoinensis HOM05D006093 ORTHO05D007652 1.6e-129 466.8 341 70.1
FAN09G4542 Fragaria x ananassa HOM05D006093 ORTHO05D007652 1.6e-129 466.8 340 69.7
HanXRQChr02g0033451 Helianthus annuus HOM05D006093 ORTHO05D007652 1.6e-129 466.8 295 77.6
Solyc03g117510.4 Solanum lycopersicum HOM05D006093 ORTHO05D007652 2.1e-129 466.5 302 76.8
PGSC0003DMG400014146 Solanum tuberosum HOM05D006093 ORTHO05D007652 2.1e-129 466.5 302 76.5
Glyma.13G366800 Glycine max HOM05D006093 ORTHO05D007652 2.7e-129 466.1 343 69.4
Lj5A75T43 Lonicera japonica HOM05D006093 ORTHO05D007652 1.8e-128 463.4 366 70.2
Sopen03g036410 Solanum pennellii HOM05D006093 ORTHO05D007652 1.8e-128 463.4 302 76.5
Medtr2g104100 Medicago truncatula HOM05D006093 ORTHO05D007652 5.1e-128 461.8 302 75.2
Nitab4.5_0010806g0010 Nicotiana tabacum HOM05D006093 ORTHO05D007652 6.7e-128 461.5 294 76.9
Migut.I00747 Erythranthe guttata HOM05D006093 ORTHO05D007652 1.1e-127 460.7 341 70.1
Gorai.011G089400 Gossypium raimondii HOM05D006093 ORTHO05D007652 2.6e-127 459.5 393 66.9
Cpa.g.sc167.9 Carica papaya HOM05D006093 ORTHO05D007652 4.4e-127 458.8 267 82.4
MSTRG.11153 Avicennia marina HOM05D006093 ORTHO05D007652 5.7e-127 458.4 304 75.3
ECA238G2964 Erigeron canadensis HOM05D005083 ORTHO05D006310 9.7e-127 457.6 326 70.2
MBI15_g24195_MAGBIO Magnolia biondii HOM05D006093 ORTHO05D007652 2.2e-126 456.4 297 77.1
vmacro16879 Vaccinium macrocarpon HOM05D006093 ORTHO05D007652 8.2e-126 454.5 356 67.4
VMungo1080G1109 Vigna mungo HOM05D006093 ORTHO05D007652 8.2e-126 454.5 336 69.3
ATR0800G026 Amborella trichopoda HOM05D006093 ORTHO05D007652 1.4e-125 453.8 340 68.8
CANSAT56G0666 Cannabis sativa HOM05D006093 ORTHO05D007652 2.4e-125 453.0 345 68.1
Cc04_g04560 Coffea canephora HOM05D006093 ORTHO05D007652 3.1e-125 452.6 285 77.5
Gohir.A10G068900 Gossypium hirsutum HOM05D006093 ORTHO05D007652 9.1e-125 451.1 353 72.5
AUR62011503 Chenopodium quinoa HOM05D006093 ORTHO05D007652 2.0e-124 449.9 287 77.0
Sed0013008 Sechium edule HOM05D006093 ORTHO05D007652 7.7e-124 448.0 302 71.5
Ca_01048_v3 Cicer arietinum L. HOM05D006093 ORTHO05D007652 1.0e-123 447.6 372 62.1
CsaV3_4G001910 Cucumis sativus L. HOM05D006093 ORTHO05D007652 1.0e-123 447.6 331 68.3
AUR62016319 Chenopodium quinoa HOM05D006093 ORTHO05D007652 1.3e-123 447.2 340 67.6
EL10Ac9g21886 Beta vulgaris HOM05D006093 ORTHO05D007652 2.9e-123 446.0 297 74.7
QL05p032033 Quercus lobata HOM05D006093 ORTHO05D007652 8.5e-123 444.5 384 64.3
CDE05G1298 Ceratophyllum demersum HOM05D006093 ORTHO05D007652 3.2e-122 442.6 306 72.5
Phvul.005G179300 Phaseolus vulgaris HOM05D006093 ORTHO05D007652 3.2e-122 442.6 341 67.2
TWI12G0620 Tripterygium wilfordii HOM05D006093 ORTHO05D007652 9.4e-122 441.0 316 71.2
FAN05G1370 Fragaria x ananassa HOM05D006093 ORTHO05D007652 1.8e-120 436.8 341 66.3
Peaxi162Scf00553g00627 Petunia axillaris HOM05D006093 ORTHO05D007652 5.2e-120 435.3 333 67.9
CAN.G407.11 Capsicum annuum HOM05D006093 ORTHO05D007652 1.5e-119 433.7 295 74.2
DCAR_025523 Daucus carota HOM05D006093 ORTHO05D007652 5.7e-119 431.8 288 75.0
SalBow2G3638 Salvia bowleyana HOM05D006093 ORTHO05D007652 1.1e-117 427.6 330 67.3
HPP92_003851 Vanilla planifolia HOM05D006093 ORTHO05D007652 3.1e-117 426.0 339 61.9
CARHR042600 Cardamine hirsuta HOM05D006093 ORTHO05D007652 7.0e-117 424.9 222 94.6
Rhsim12G0190000 Rhododendron simsii HOM05D006093 ORTHO05D007652 7.0e-117 424.9 373 64.9
Nn8g39568 Nelumbo nucifera HOM05D006093 ORTHO05D007652 5.0e-115 418.7 252 82.5
AL1G60740 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 8.5e-115 417.9 222 93.7
Manes.04G110800 Manihot esculenta HOM05D006093 ORTHO05D007652 1.2e-113 414.1 354 67.5
ECA247G0880 Erigeron canadensis HOM05D006093 ORTHO05D007652 2.7e-113 412.9 341 63.0
Os08g0304900 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 1.0e-112 411.0 327 64.5
unitig_62.g23594 Utricularia gibba HOM05D006093 ORTHO05D007652 2.3e-112 409.8 358 58.7
Hund00502 Selenicereus undatus HOM05D006093 ORTHO05D007652 8.8e-112 407.9 260 75.8
ClCG07G012240 Citrullus lanatus HOM05D006093 ORTHO05D007652 1.5e-111 407.1 402 54.5
GSVIVG01017379001 Vitis vinifera HOM05D006093 ORTHO05D007652 9.7e-111 404.4 245 78.8
Os06g0643600 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 3.7e-110 402.5 294 68.4
Ah.01g020480 Amaranthus hybridus HOM05D006093 ORTHO05D007652 4.8e-110 402.1 327 65.7
Sabra03G0017500 Salix brachista HOM05D006093 ORTHO05D007652 4.8e-110 402.1 434 57.4
Zm00001eb275260 Zea mays HOM05D006093 ORTHO05D007652 1.4e-109 400.6 291 68.0
Lsat_1_v5_gn_1_34180 Lactuca sativa HOM05D006093 ORTHO05D007652 2.4e-109 399.8 330 63.9
HanXRQChr02g0033461 Helianthus annuus HOM05D006093 ORTHO05D007652 7.7e-108 394.8 293 68.9
HanXRQChr02g0033471 Helianthus annuus HOM05D006093 ORTHO05D007652 6.5e-107 391.7 343 62.7
PGR102G2220 Punica granatum HOM05D006093 ORTHO05D007652 6.1e-105 385.2 281 70.1
Haze_16582 Corylus avellana HOM05D006093 ORTHO05D007652 1.8e-104 383.6 291 72.5
SGA_v2.0_scaffold5G02719 Striga asiatica HOM05D006093 ORTHO05D007652 4.0e-104 382.5 318 62.9
Psat5g303120 Pisum sativum HOM05D006093 ORTHO05D007652 1.5e-103 380.6 393 54.5
MELO3C017842.2 Cucumis melo HOM05D006093 ORTHO05D007652 9.8e-103 377.9 353 56.4
Nitab4.5_0003072g0060 Nicotiana tabacum HOM05D006093 ORTHO05D007652 1.6e-100 370.5 337 60.2
Prupe.3G090700 Prunus persica HOM05D006093 ORTHO05D007652 2.1e-97 360.1 221 80.5
Dinv30625 Davidia involucrata HOM05D006093 ORTHO05D007652 8.0e-97 358.2 262 70.2
Actinidia08791 Actinidia chinensis HOM05D006093 ORTHO05D007652 1.8e-93 347.1 267 72.7
Sc10g0008130 Simmondsia chinensis HOM05D006093 ORTHO05D007652 1.2e-92 344.4 218 78.0
Pp3c23_21520 Physcomitrium patens HOM05D006093 ORTHO05D007652 4.0e-88 329.3 334 50.3
Pp3c8_24280 Physcomitrium patens HOM05D006093 ORTHO05D007652 5.4e-85 318.9 288 54.5
SHI11225 Sapria himalayana HOM05D006093 ORTHO05D007652 4.6e-84 315.8 332 53.6
Cfa001944 Carpinus fangiana HOM05D006093 ORTHO05D007652 3.0e-83 313.2 247 69.2
Mapoly0015s0062 Marchantia polymorpha HOM05D006093 ORTHO05D007652 2.5e-82 310.1 277 54.5
SMO367G0330 Selaginella moellendorffii HOM05D006093 ORTHO05D007652 2.3e-80 303.5 251 62.5
Pp3c24_20180 Physcomitrium patens HOM05D006093 ORTHO05D007652 1.7e-75 287.3 306 47.4
PSO017G4202 Papaver somniferum HOM05D006093 ORTHO05D007652 9.9e-71 271.6 183 75.4
Cre10.g428433 Chlamydomonas reinhardtii HOM05D006093 ORTHO05D007652 7.8e-68 261.9 301 46.5
CBR_g884 Chara braunii HOM05D006093 ORTHO05D007652 2.3e-67 260.4 246 51.2
Psat6g066000 Pisum sativum HOM05D006093 ORTHO05D007652 2.4e-61 240.4 182 66.5
MCO15G481 Micromonas commoda HOM05D006093 ORTHO05D007652 3.0e-51 206.8 271 41.0
Eucgr.L03570 Eucalyptus grandis HOM05D006093 ORTHO05D007652 8.1e-49 198.7 114 77.2
GSVIVG01026354001 Vitis vinifera HOM05D006093 ORTHO05D007652 5.3e-48 196.1 113 79.6
Cfa026683 Carpinus fangiana HOM05D006093 ORTHO05D007652 1.2e-47 194.9 338 32.8
Cfa001945 Carpinus fangiana HOM05D006093 ORTHO05D007652 2.2e-46 190.7 349 39.5
Gohir.D10G074901 Gossypium hirsutum HOM05D006093 ORTHO05D007652 5.4e-45 186.0 121 76.9
CARHR042620 Cardamine hirsuta HOM05D006093 ORTHO05D007652 6.7e-43 179.1 177 76.3
AL7G45760 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 9.0e-40 168.7 101 85.1
AL1G60750 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 1.4e-37 161.4 176 77.3
SEGI_24777 Sequoiadendron giganteum HOM05D006093 ORTHO05D007652 1.6e-33 147.9 103 65.0
Actinidia08958 Actinidia chinensis HOM05D006093 ORTHO05D007652 3.8e-30 136.7 77 79.2
Dinv01702 Davidia involucrata HOM05D006093 ORTHO05D007652 4.2e-29 133.3 91 65.9
Dinv21460 Davidia involucrata HOM05D006093 ORTHO05D007652 1.8e-27 127.9 77 75.3
Oeu058023.3 Olea europaea HOM05D006093 ORTHO05D005440 8.7e-27 125.6 76 72.4
SEGI_39009 Sequoiadendron giganteum HOM05D006093 ORTHO05D007652 7.2e-21 105.9 76 67.1
Thecc.09G173900 Theobroma cacao HOM05D006093 ORTHO05D007652 2.6e-15 87.4 79 58.2
Medtr3g118550 Medicago truncatula HOM05D006093 ORTHO05D007652 5.9e-15 86.3 128 42.2
SGA_v2.0_scaffold72G24067 Striga asiatica HOM05D006093 ORTHO05D007652 1.7e-14 84.7 98 46.9
Sabra14G0094900 Salix brachista HOM05D006093 ORTHO05D007652 4.2e-13 80.1 54 68.5
BolC4t26141H Brassica oleracea HOM05D035675 ORTHO05D007652 5.3e-08 63.2 67 58.2


User provided reference genes

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