Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g028750.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 1.4e-26 122.1 57 100.0
Nitab4.5_0001715g0130 Nicotiana tabacum HOM05D000216 ORTHO05D001131 1.5e-09 65.5 51 66.7
Nitab4.5_0000095g0040 Nicotiana tabacum HOM05D000216 ORTHO05D001131 2.0e-09 65.1 50 68.0
CAN.G1082.2 Capsicum annuum HOM05D000216 ORTHO05D001131 4.5e-09 63.9 51 64.7
CAN.G1288.12 Capsicum annuum HOM05D000216 ORTHO05D001131 5.9e-09 63.5 51 62.7
AL2G20930 Arabidopsis lyrata HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
ATCG00190 Arabidopsis thaliana HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
BcaC02g10983 Brassica carinata HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
BcaC05g28800 Brassica carinata HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
BcaC09g49582 Brassica carinata HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
BNapus_Darmor_BZH_scaffold_253p00080 Brassica napus HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
C01p34920 Brassica napus HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
C04p22660 Brassica napus HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
BolSC45t60940H Brassica oleracea HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
BolSC49t61196H Brassica oleracea HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
BraSC140t45585Z Brassica rapa HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
BraSC140t45600Z Brassica rapa HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
BraSC140t45606Z Brassica rapa HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
BraSC151t45705Z Brassica rapa HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
BraSC58t46479Z Brassica rapa HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
CAN.G1738.7 Capsicum annuum HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
CAN.G892.2 Capsicum annuum HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
CAN.G939.17 Capsicum annuum HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
Migut.D01417 Erythranthe guttata HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
Gohir.D01G029500 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
Nn020s41502 Nelumbo nucifera HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
Nn082s42674 Nelumbo nucifera HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
PGR111G0080 Punica granatum HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
QL11p015550 Quercus lobata HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
SalBow7G2811 Salvia bowleyana HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
Sc13g0006970 Simmondsia chinensis HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
Sc15g0001760 Simmondsia chinensis HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
Sc25g0001960 Simmondsia chinensis HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
unitig_91.g26498 Utricularia gibba HOM05D000216 ORTHO05D001131 2.2e-08 61.6 51 64.7
Hma1.2p1_0094F.1_g047108 Hydrangea macrophylla HOM05D000216 ORTHO05D001131 2.9e-08 61.2 51 64.7
PSO548G0026 Papaver somniferum HOM05D000216 ORTHO05D001131 2.9e-08 61.2 51 62.7
CAN.G358.145 Capsicum annuum HOM05D000216 ORTHO05D001131 3.8e-08 60.8 51 60.8
Peaxi162Scf00465g00043 Petunia axillaris HOM05D000216 ORTHO05D001131 3.8e-08 60.8 51 62.7
CAN.G1648.7 Capsicum annuum HOM05D000216 ORTHO05D001131 5.0e-08 60.5 51 62.7
ATR0427G001 Amborella trichopoda HOM05D000216 ORTHO05D001131 6.5e-08 60.1 51 62.7
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 6.5e-08 60.1 51 62.7
EL10As4g23395 Beta vulgaris HOM05D000216 ORTHO05D001131 6.5e-08 60.1 51 62.7
AUR62024083 Chenopodium quinoa HOM05D000216 ORTHO05D001131 6.5e-08 60.1 51 62.7
CAN.G1439.2 Capsicum annuum HOM05D000216 ORTHO05D001131 8.5e-08 59.7 51 58.8
CAN.G1576.2 Capsicum annuum HOM05D000216 ORTHO05D001131 8.5e-08 59.7 51 58.8
CAN.G2251.2 Capsicum annuum HOM05D000216 ORTHO05D001131 8.5e-08 59.7 51 58.8
DCAR_032476 Daucus carota HOM05D000216 ORTHO05D001131 8.5e-08 59.7 51 62.7
Lalb_Chr09g0335411 Lupinus albus HOM05D000216 ORTHO05D001131 8.5e-08 59.7 51 62.7
Sed0002232 Sechium edule HOM05D000216 ORTHO05D001131 8.5e-08 59.7 51 60.8
Sed0007596 Sechium edule HOM05D000216 ORTHO05D001131 8.5e-08 59.7 51 60.8
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 8.5e-08 59.7 51 60.8
BraSC177t45754Z Brassica rapa HOM05D000216 ORTHO05D001131 1.1e-07 59.3 51 62.7
Ca_05611_v3 Cicer arietinum L. HOM05D000216 ORTHO05D001131 1.1e-07 59.3 51 62.7
Lj2A1238G119 Lonicera japonica HOM05D000216 ORTHO05D001131 1.1e-07 59.3 51 62.7
Lj2A1239T199 Lonicera japonica HOM05D000216 ORTHO05D001131 1.1e-07 59.3 51 62.7
Lj2C1237G9 Lonicera japonica HOM05D000216 ORTHO05D001131 1.1e-07 59.3 51 62.7
LjContig00318g0016482 Lotus japonicus HOM05D000216 ORTHO05D001131 1.1e-07 59.3 51 62.7
LjContig00489g0016354 Lotus japonicus HOM05D000216 ORTHO05D001131 1.1e-07 59.3 51 62.7
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 1.1e-07 59.3 51 62.7
Potri.013G142232 Populus trichocarpa HOM05D000216 ORTHO05D001131 1.1e-07 59.3 51 62.7
SabraPtG0001100 Salix brachista HOM05D000216 ORTHO05D001131 1.1e-07 59.3 51 62.7
Solyc01g095950.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 1.1e-07 59.3 51 62.7
VMungo1015G0001 Vigna mungo HOM05D000216 ORTHO05D001131 1.4e-07 58.9 51 60.8
Nitab4.5_0007104g0040 Nicotiana tabacum HOM05D000216 ORTHO05D001131 1.9e-07 58.5 51 60.8
Ah.01g011550 Amaranthus hybridus HOM05D000216 ORTHO05D001131 2.5e-07 58.2 51 60.8
Ah.09g227320 Amaranthus hybridus HOM05D000216 ORTHO05D001131 2.5e-07 58.2 51 60.8
Ah.10g027590 Amaranthus hybridus HOM05D000216 ORTHO05D001131 2.5e-07 58.2 51 60.8
BolC7t41732H Brassica oleracea HOM05D000216 ORTHO05D001131 2.5e-07 58.2 51 62.7
CsaV3_UNG208330 Cucumis sativus L. HOM05D000216 ORTHO05D001131 2.5e-07 58.2 51 60.8
CDE02G0866 Ceratophyllum demersum HOM05D000216 ORTHO05D001131 3.2e-07 57.8 51 60.8
RcHm_v2.0_CPg0502401 Rosa chinensis HOM05D000216 ORTHO05D001131 3.2e-07 57.8 51 60.8
Nitab4.5_0000172g0250 Nicotiana tabacum HOM05D000216 ORTHO05D001131 4.2e-07 57.4 51 60.8
Gohir.D12G077902 Gossypium hirsutum HOM05D000216 ORTHO05D001131 5.5e-07 57.0 51 60.8
Gorai.001G136600 Gossypium raimondii HOM05D000216 ORTHO05D001131 5.5e-07 57.0 48 62.5
Hund08566 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund18042 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund19314 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund23975 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund25935 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund27452 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund27562 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund27608 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund27642 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund27656 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund27670 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund27699 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund27744 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund27763 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund27805 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund27822 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund27840 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund27867 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund27916 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund27944 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund27998 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28018 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28026 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28058 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28123 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28131 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28139 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28154 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28163 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28189 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28208 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28237 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28247 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28260 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28279 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28292 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28336 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28353 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28372 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28385 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28398 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28413 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28500 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28556 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28578 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28618 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28642 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28686 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28697 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28715 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28806 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28824 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28904 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28914 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund28984 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund29113 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund29197 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund29207 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund29340 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund29354 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund29389 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund29478 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund29486 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund29645 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund29745 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund30018 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
Hund30063 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-07 57.0 50 62.0
SGA_v2.0_scaffold119G32686 Striga asiatica HOM05D000216 ORTHO05D001131 7.2e-07 56.6 50 62.0
Ah.10g027890 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.2e-06 55.8 51 58.8
Ah.10g028290 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.2e-06 55.8 51 58.8
EL10Ac9g20735 Beta vulgaris HOM05D000216 ORTHO05D001131 1.2e-06 55.8 50 58.0
Hund28702 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.2e-06 55.8 50 60.0
Gohir.D07G126525 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.7e-06 54.7 48 60.4
arahy.Tifrunner.gnm1.ann1.J2QZCX Arachis hypogaea HOM05D000216 ORTHO05D001131 3.6e-06 54.3 50 60.0
arahy.Tifrunner.gnm1.ann1.MIWC4Y Arachis hypogaea HOM05D000216 ORTHO05D001131 3.6e-06 54.3 50 60.0
Atru.chr13.1915 Acer truncatum HOM05D000216 ORTHO05D001131 4.7e-06 53.9 46 60.9
vmacro22402 Vaccinium macrocarpon HOM05D000216 ORTHO05D001131 7.9e-06 53.1 51 54.9


User provided reference genes

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