Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g028740.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 2.5e-26 121.3 59 100.0
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 1.5e-12 75.5 58 63.8
EL10As4g23395 Beta vulgaris HOM05D000216 ORTHO05D001131 1.5e-12 75.5 58 63.8
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 2.0e-12 75.1 58 62.1
vmacro22402 Vaccinium macrocarpon HOM05D000216 ORTHO05D001131 2.6e-12 74.7 58 63.8
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 3.4e-12 74.3 58 63.8
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 4.5e-12 73.9 58 62.1
CAN.G1082.2 Capsicum annuum HOM05D000216 ORTHO05D001131 5.9e-12 73.6 58 62.1
Ca_05611_v3 Cicer arietinum L. HOM05D000216 ORTHO05D001131 5.9e-12 73.6 58 62.1
LjContig00318g0016482 Lotus japonicus HOM05D000216 ORTHO05D001131 5.9e-12 73.6 58 62.1
PGR111G0080 Punica granatum HOM05D000216 ORTHO05D001131 5.9e-12 73.6 58 62.1
RcHm_v2.0_CPg0502401 Rosa chinensis HOM05D000216 ORTHO05D001131 5.9e-12 73.6 58 62.1
Sc13g0006970 Simmondsia chinensis HOM05D000216 ORTHO05D001131 5.9e-12 73.6 58 62.1
Sc15g0001760 Simmondsia chinensis HOM05D000216 ORTHO05D001131 5.9e-12 73.6 58 62.1
Sc25g0001960 Simmondsia chinensis HOM05D000216 ORTHO05D001131 5.9e-12 73.6 58 62.1
PSO548G0026 Papaver somniferum HOM05D000216 ORTHO05D001131 7.7e-12 73.2 58 60.3
Ah.01g011550 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.0e-11 72.8 58 62.1
Ah.09g227320 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.0e-11 72.8 58 62.1
Ah.10g027590 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.0e-11 72.8 58 62.1
Hma1.2p1_0094F.1_g047108 Hydrangea macrophylla HOM05D000216 ORTHO05D001131 1.0e-11 72.8 58 60.3
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 1.0e-11 72.8 58 62.1
Psat3g186440 Pisum sativum HOM05D000216 ORTHO05D001131 1.0e-11 72.8 58 62.1
Psat7g199200 Pisum sativum HOM05D000216 ORTHO05D001131 1.0e-11 72.8 58 62.1
arahy.Tifrunner.gnm1.ann1.MIWC4Y Arachis hypogaea HOM05D000216 ORTHO05D001131 1.3e-11 72.4 58 60.3
CAN.G1648.7 Capsicum annuum HOM05D000216 ORTHO05D001131 1.3e-11 72.4 58 62.1
CAN.G1738.7 Capsicum annuum HOM05D000216 ORTHO05D001131 1.3e-11 72.4 58 62.1
CAN.G892.2 Capsicum annuum HOM05D000216 ORTHO05D001131 1.3e-11 72.4 58 62.1
CAN.G939.17 Capsicum annuum HOM05D000216 ORTHO05D001131 1.3e-11 72.4 58 62.1
Peaxi162Scf00608g00014 Petunia axillaris HOM05D000216 ORTHO05D001131 1.3e-11 72.4 58 62.1
LjContig00489g0016354 Lotus japonicus HOM05D000216 ORTHO05D001131 1.7e-11 72.0 58 62.1
Potri.013G142232 Populus trichocarpa HOM05D000216 ORTHO05D001131 2.2e-11 71.6 58 60.3
SabraPtG0001100 Salix brachista HOM05D000216 ORTHO05D001131 2.2e-11 71.6 58 60.3
DCAR_032476 Daucus carota HOM05D000216 ORTHO05D001131 2.9e-11 71.2 58 58.6
Lj2A1238G119 Lonicera japonica HOM05D000216 ORTHO05D001131 2.9e-11 71.2 58 60.3
Lj2A1239T199 Lonicera japonica HOM05D000216 ORTHO05D001131 2.9e-11 71.2 58 60.3
Lj2C1237G9 Lonicera japonica HOM05D000216 ORTHO05D001131 2.9e-11 71.2 58 60.3
Nitab4.5_0007104g0040 Nicotiana tabacum HOM05D000216 ORTHO05D001131 2.9e-11 71.2 58 62.1
Psat7g026840 Pisum sativum HOM05D000216 ORTHO05D001131 2.9e-11 71.2 58 62.1
Sed0002232 Sechium edule HOM05D000216 ORTHO05D001131 2.9e-11 71.2 58 60.3
Sed0007596 Sechium edule HOM05D000216 ORTHO05D001131 2.9e-11 71.2 58 60.3
SGA_v2.0_scaffold119G32686 Striga asiatica HOM05D000216 ORTHO05D001131 3.8e-11 70.9 58 60.3
CAN.G358.145 Capsicum annuum HOM05D000216 ORTHO05D001131 1.1e-10 69.3 58 60.3
Nn020s41502 Nelumbo nucifera HOM05D000216 ORTHO05D001131 1.1e-10 69.3 58 56.9
Nn082s42674 Nelumbo nucifera HOM05D000216 ORTHO05D001131 1.1e-10 69.3 58 56.9
VMungo1015G0001 Vigna mungo HOM05D000216 ORTHO05D001131 1.1e-10 69.3 58 58.6
unitig_91.g26498 Utricularia gibba HOM05D000216 ORTHO05D001131 1.4e-10 68.9 58 58.6
Ah.10g027890 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 58.6
Ah.10g028290 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 58.6
ATR0329G029 Amborella trichopoda HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 56.9
AL2G20930 Arabidopsis lyrata HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 58.6
BNapus_Darmor_BZH_scaffold_253p00080 Brassica napus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 58.6
BolSC45t60940H Brassica oleracea HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 58.6
BolSC49t61196H Brassica oleracea HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 58.6
BraSC140t45600Z Brassica rapa HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 58.6
BraSC140t45606Z Brassica rapa HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 58.6
BraSC151t45705Z Brassica rapa HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 58.6
BraSC58t46479Z Brassica rapa HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 58.6
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 58.6
Hund08566 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund18042 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund19314 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund23975 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund25935 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund27452 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund27562 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund27608 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund27642 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund27656 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund27670 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund27699 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund27744 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund27763 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund27805 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund27822 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund27840 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund27867 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund27916 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund27998 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28018 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28026 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28058 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28123 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28131 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28139 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28154 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28163 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28189 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28208 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28237 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28247 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28260 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28279 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28336 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28353 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28385 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28398 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28413 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28500 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28556 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28578 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28618 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28642 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28686 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28697 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28702 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28806 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28824 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28904 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28914 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund28984 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund29113 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund29197 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund29207 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund29340 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund29354 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund29389 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund29478 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund29486 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund29645 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund29745 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund30018 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
Hund30063 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-10 68.6 58 60.3
ATCG00190 Arabidopsis thaliana HOM05D000216 ORTHO05D001131 2.5e-10 68.2 58 56.9
CsaV3_UNG208330 Cucumis sativus L. HOM05D000216 ORTHO05D001131 2.5e-10 68.2 58 58.6
Gohir.D12G077902 Gossypium hirsutum HOM05D000216 ORTHO05D001131 4.2e-10 67.4 58 58.6
Lalb_Chr09g0335411 Lupinus albus HOM05D000216 ORTHO05D001131 4.2e-10 67.4 58 56.9
Solyc10g017920.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 4.2e-10 67.4 58 58.6
HanXRQChr05g0139701 Helianthus annuus HOM05D000216 ORTHO05D001131 5.5e-10 67.0 58 58.6
HanXRQChr11g0326601 Helianthus annuus HOM05D000216 ORTHO05D001131 5.5e-10 67.0 58 58.6
HanXRQChr16g0503971 Helianthus annuus HOM05D000216 ORTHO05D001131 5.5e-10 67.0 58 58.6
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 5.5e-10 67.0 58 58.6
Lsat_1_v5_gn_1_118620 Lactuca sativa HOM05D000216 ORTHO05D001131 5.5e-10 67.0 58 58.6
Lsat_1_v5_gn_1_92840 Lactuca sativa HOM05D000216 ORTHO05D001131 5.5e-10 67.0 58 58.6
Lsat_1_v5_gn_8_1800 Lactuca sativa HOM05D000216 ORTHO05D001131 5.5e-10 67.0 58 58.6
Gorai.008G086500 Gossypium raimondii HOM05D000216 ORTHO05D001131 9.4e-10 66.2 58 58.6
QL11p015550 Quercus lobata HOM05D000216 ORTHO05D001131 9.4e-10 66.2 58 56.9
AUR62024083 Chenopodium quinoa HOM05D000216 ORTHO05D001131 1.2e-09 65.9 58 56.9
Gohir.A07G155805 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.2e-09 65.9 58 56.9
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 1.2e-09 65.9 47 68.1
Gorai.001G136600 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.1e-09 65.1 58 56.9
Gohir.D02G042933 Gossypium hirsutum HOM05D000216 ORTHO05D001131 3.6e-09 64.3 58 56.9
Gohir.D07G126525 Gossypium hirsutum HOM05D000216 ORTHO05D001131 3.6e-09 64.3 58 56.9
arahy.Tifrunner.gnm1.ann1.J2QZCX Arachis hypogaea HOM05D000216 ORTHO05D001131 4.7e-09 63.9 58 53.4
ATR0427G001 Amborella trichopoda HOM05D000216 ORTHO05D001131 1.0e-08 62.8 47 63.8
BolC1t03450H Brassica oleracea HOM05D000216 ORTHO05D001131 2.3e-08 61.6 48 60.4
C01p34840 Brassica napus HOM05D000216 ORTHO05D001131 3.9e-08 60.8 47 61.7
Lalb_Chr23g0274591 Lupinus albus HOM05D000216 ORTHO05D013308 2.6e-07 58.2 57 50.9
arahy.Tifrunner.gnm1.ann1.V1C6S4 Arachis hypogaea HOM05D000216 ORTHO05D001131 3.3e-07 57.8 59 54.2
C01p34920 Brassica napus HOM05D000216 ORTHO05D001131 1.7e-06 55.5 43 60.5
Psat1g084320 Pisum sativum HOM05D000216 ORTHO05D001131 4.8e-06 53.9 46 56.5
ClCG01G011250 Citrullus lanatus HOM05D000216 ORTHO05D001131 6.3e-06 53.5 43 62.8


User provided reference genes

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