Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G02719 Striga asiatica HOM05D006093 ORTHO05D007652 1.7e-185 652.5 324 100.0
Migut.I00747 Erythranthe guttata HOM05D006093 ORTHO05D007652 4.5e-122 441.8 322 71.4
MSTRG.11153 Avicennia marina HOM05D006093 ORTHO05D007652 2.5e-120 436.0 322 70.8
CSS0022367 Camellia sinensis var. sinensis HOM05D006093 ORTHO05D007652 3.7e-116 422.2 322 67.4
Gorai.011G089400 Gossypium raimondii HOM05D006093 ORTHO05D007652 8.2e-116 421.0 337 65.0
Hma1.2p1_0017F.1_g011320 Hydrangea macrophylla HOM05D006093 ORTHO05D007652 7.7e-114 414.5 322 67.7
ClCG07G012240 Citrullus lanatus HOM05D006093 ORTHO05D007652 1.3e-113 413.7 348 60.9
Manes.11G058700 Manihot esculenta HOM05D006093 ORTHO05D007652 1.5e-112 410.2 322 65.8
Atru.chr1.2881 Acer truncatum HOM05D006093 ORTHO05D007652 2.5e-112 409.5 322 65.2
Gohir.D10G082500 Gossypium hirsutum HOM05D006093 ORTHO05D007652 2.5e-112 409.5 322 65.5
ATR0800G026 Amborella trichopoda HOM05D006093 ORTHO05D007652 4.2e-112 408.7 322 64.9
Ciclev10025737m.g Citrus clementina HOM05D006093 ORTHO05D007652 4.2e-112 408.7 322 64.9
Eucgr.F03905 Eucalyptus grandis HOM05D006093 ORTHO05D007652 9.4e-112 407.5 322 64.9
QL05p032033 Quercus lobata HOM05D006093 ORTHO05D007652 9.4e-112 407.5 329 65.0
Nitab4.5_0010806g0010 Nicotiana tabacum HOM05D006093 ORTHO05D007652 1.6e-111 406.8 322 64.3
Thecc.06G031100 Theobroma cacao HOM05D006093 ORTHO05D007652 2.1e-111 406.4 322 64.3
TAR626G1009 Trochodendron aralioides HOM05D006093 ORTHO05D007652 6.1e-111 404.8 322 64.9
Lj5A75T43 Lonicera japonica HOM05D006093 ORTHO05D007652 8.0e-111 404.4 347 61.4
PGSC0003DMG400014146 Solanum tuberosum HOM05D006093 ORTHO05D007652 1.8e-110 403.3 322 64.3
COL.COLO4_11898 Corchorus olitorius HOM05D006093 ORTHO05D007652 2.3e-110 402.9 322 64.6
vmacro16879 Vaccinium macrocarpon HOM05D006093 ORTHO05D007652 2.3e-110 402.9 339 63.1
Cc04_g04560 Coffea canephora HOM05D006093 ORTHO05D007652 1.5e-109 400.2 322 64.6
Solyc03g117510.4 Solanum lycopersicum HOM05D006093 ORTHO05D007652 1.5e-109 400.2 322 64.3
SalBow2G3638 Salvia bowleyana HOM05D006093 ORTHO05D007652 2.0e-109 399.8 322 68.0
CiPaw.01G249800 Carya illinoinensis HOM05D006093 ORTHO05D007652 2.6e-109 399.4 322 64.0
RcHm_v2.0_Chr2g0134861 Rosa chinensis HOM05D006093 ORTHO05D007652 5.7e-109 398.3 318 66.0
Sopen03g036410 Solanum pennellii HOM05D006093 ORTHO05D007652 5.7e-109 398.3 322 64.3
MD17G1215000 Malus domestica HOM05D006093 ORTHO05D007652 7.5e-109 397.9 322 64.9
Aa31LG10G2500 Aethionema arabicum HOM05D006093 ORTHO05D007652 9.7e-109 397.5 322 63.7
Potri.003G031100 Populus trichocarpa HOM05D006093 ORTHO05D007652 2.2e-108 396.4 322 64.9
unitig_62.g23594 Utricularia gibba HOM05D006093 ORTHO05D007652 2.8e-108 396.0 321 63.6
MBI15_g24195_MAGBIO Magnolia biondii HOM05D006093 ORTHO05D007652 3.7e-108 395.6 324 63.9
Duzib235G0399 Durio zibethinus HOM05D006093 ORTHO05D007652 6.3e-108 394.8 322 63.0
DCAR_025523 Daucus carota HOM05D006093 ORTHO05D007652 1.4e-107 393.7 317 64.7
FvH4_6g29401 Fragaria vesca HOM05D006093 ORTHO05D007652 1.4e-107 393.7 322 64.3
FAN14G2225 Fragaria x ananassa HOM05D006093 ORTHO05D007652 1.4e-107 393.7 322 64.3
FAN09G4542 Fragaria x ananassa HOM05D006093 ORTHO05D007652 1.8e-107 393.3 318 65.1
HanXRQChr02g0033451 Helianthus annuus HOM05D006093 ORTHO05D007652 4.1e-107 392.1 322 62.7
THA.LOC104818014 Tarenaya hassleriana HOM05D006093 ORTHO05D007652 1.2e-106 390.6 322 61.8
AUR62016319 Chenopodium quinoa HOM05D006093 ORTHO05D007652 1.6e-106 390.2 322 63.7
Cpa.g.sc167.9 Carica papaya HOM05D006093 ORTHO05D007652 2.0e-106 389.8 322 61.2
CANSAT56G0666 Cannabis sativa HOM05D006093 ORTHO05D007652 2.7e-106 389.4 323 63.5
Carub.0001s4146 Capsella rubella HOM05D006093 ORTHO05D007652 2.7e-106 389.4 318 63.5
Lalb_Chr24g0395421 Lupinus albus HOM05D006093 ORTHO05D007652 2.7e-106 389.4 322 63.4
PSO170G6797 Papaver somniferum HOM05D006093 ORTHO05D007652 3.5e-106 389.0 324 63.0
BcaC08g43998 Brassica carinata HOM05D006093 ORTHO05D007652 4.5e-106 388.7 322 61.8
A05p18970 Brassica napus HOM05D006093 ORTHO05D007652 4.5e-106 388.7 322 62.1
BraA05t20794Z Brassica rapa HOM05D006093 ORTHO05D007652 4.5e-106 388.7 322 62.1
TPR.G37262 Trifolium pratense HOM05D006093 ORTHO05D007652 5.9e-106 388.3 322 62.4
Gohir.A10G068900 Gossypium hirsutum HOM05D006093 ORTHO05D007652 1.3e-105 387.1 322 64.0
Medtr2g104100 Medicago truncatula HOM05D006093 ORTHO05D007652 1.3e-105 387.1 322 63.0
Sp1g39050 Schrenkiella parvula HOM05D006093 ORTHO05D007652 1.7e-105 386.7 318 62.9
BolC6t36581H Brassica oleracea HOM05D006093 ORTHO05D007652 2.9e-105 386.0 322 61.2
Lj3g0003829 Lotus japonicus HOM05D006093 ORTHO05D007652 2.9e-105 386.0 322 62.1
Glyma.13G366800 Glycine max HOM05D006093 ORTHO05D007652 3.8e-105 385.6 322 62.4
arahy.Tifrunner.gnm1.ann1.5T1ZSX Arachis hypogaea HOM05D006093 ORTHO05D007652 6.5e-105 384.8 322 62.4
arahy.Tifrunner.gnm1.ann1.RDN84X Arachis hypogaea HOM05D006093 ORTHO05D007652 6.5e-105 384.8 322 62.4
AT1G52500 Arabidopsis thaliana HOM05D006093 ORTHO05D007652 1.1e-104 384.0 322 61.8
BcaB02g10988 Brassica carinata HOM05D006093 ORTHO05D007652 1.1e-104 384.0 322 61.2
AUR62011503 Chenopodium quinoa HOM05D006093 ORTHO05D007652 1.5e-104 383.6 322 62.7
Thhalv10011553m.g Eutrema salsugineum HOM05D006093 ORTHO05D007652 1.5e-104 383.6 322 61.5
Hund00502 Selenicereus undatus HOM05D006093 ORTHO05D007652 2.5e-104 382.9 318 61.6
VMungo1080G1109 Vigna mungo HOM05D006093 ORTHO05D007652 3.2e-104 382.5 322 61.8
CsaV3_4G001910 Cucumis sativus L. HOM05D006093 ORTHO05D007652 1.2e-103 380.6 318 61.0
CDE05G1298 Ceratophyllum demersum HOM05D006093 ORTHO05D007652 2.7e-103 379.4 323 61.9
TWI12G0620 Tripterygium wilfordii HOM05D006093 ORTHO05D007652 2.7e-103 379.4 322 63.4
Prupe.3G090700 Prunus persica HOM05D006093 ORTHO05D007652 6.1e-103 378.3 283 68.9
EL10Ac9g21886 Beta vulgaris HOM05D006093 ORTHO05D007652 8.0e-103 377.9 322 61.2
Sed0013008 Sechium edule HOM05D006093 ORTHO05D007652 1.0e-102 377.5 318 60.7
ECA238G2964 Erigeron canadensis HOM05D005083 ORTHO05D006310 5.2e-102 375.2 322 60.2
Rhsim12G0190000 Rhododendron simsii HOM05D006093 ORTHO05D007652 5.2e-102 375.2 324 62.7
HPP92_003851 Vanilla planifolia HOM05D006093 ORTHO05D007652 3.4e-101 372.5 322 58.4
Peaxi162Scf00553g00627 Petunia axillaris HOM05D006093 ORTHO05D007652 8.3e-100 367.9 353 57.2
GSVIVG01017379001 Vitis vinifera HOM05D006093 ORTHO05D007652 1.8e-99 366.7 233 77.3
CAN.G407.11 Capsicum annuum HOM05D006093 ORTHO05D007652 4.1e-99 365.5 233 77.7
Nn8g39568 Nelumbo nucifera HOM05D006093 ORTHO05D007652 4.1e-99 365.5 314 62.4
Manes.04G110800 Manihot esculenta HOM05D006093 ORTHO05D007652 9.1e-99 364.4 313 61.0
FAN05G1370 Fragaria x ananassa HOM05D006093 ORTHO05D007652 3.5e-98 362.5 319 61.1
Phvul.005G179300 Phaseolus vulgaris HOM05D006093 ORTHO05D007652 1.3e-97 360.5 314 61.5
Os08g0304900 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 6.6e-97 358.2 313 60.4
Ah.01g020480 Amaranthus hybridus HOM05D006093 ORTHO05D007652 2.5e-96 356.3 325 59.1
Ca_01048_v3 Cicer arietinum L. HOM05D006093 ORTHO05D007652 9.5e-96 354.4 347 55.6
CARHR042600 Cardamine hirsuta HOM05D006093 ORTHO05D007652 2.3e-94 349.7 233 74.2
Os06g0643600 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 2.3e-94 349.7 325 57.5
AL1G60740 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 1.5e-93 347.1 235 73.6
Zm00001eb275260 Zea mays HOM05D006093 ORTHO05D007652 2.0e-93 346.7 324 56.2
Psat5g303120 Pisum sativum HOM05D006093 ORTHO05D007652 8.3e-92 341.3 325 58.2
Sabra03G0017500 Salix brachista HOM05D006093 ORTHO05D007652 6.6e-89 331.6 392 50.8
Nitab4.5_0003072g0060 Nicotiana tabacum HOM05D006093 ORTHO05D007652 1.9e-88 330.1 314 57.6
Lsat_1_v5_gn_1_34180 Lactuca sativa HOM05D006093 ORTHO05D007652 1.2e-87 327.4 313 58.1
ECA247G0880 Erigeron canadensis HOM05D006093 ORTHO05D007652 1.6e-87 327.0 314 56.4
PGR102G2220 Punica granatum HOM05D006093 ORTHO05D007652 8.0e-87 324.7 315 57.5
HanXRQChr02g0033461 Helianthus annuus HOM05D006093 ORTHO05D007652 6.8e-86 321.6 324 54.9
HanXRQChr02g0033471 Helianthus annuus HOM05D006093 ORTHO05D007652 1.9e-83 313.5 323 52.9
Haze_16582 Corylus avellana HOM05D006093 ORTHO05D007652 5.0e-81 305.4 254 62.6
MELO3C017842.2 Cucumis melo HOM05D006093 ORTHO05D007652 8.6e-81 304.7 349 48.4
Dinv30625 Davidia involucrata HOM05D006093 ORTHO05D007652 8.3e-76 288.1 282 56.0
Actinidia08791 Actinidia chinensis HOM05D006093 ORTHO05D007652 2.1e-74 283.5 245 61.6
SMO367G0330 Selaginella moellendorffii HOM05D006093 ORTHO05D007652 4.7e-71 272.3 313 49.5
Sc10g0008130 Simmondsia chinensis HOM05D006093 ORTHO05D007652 8.9e-70 268.1 245 58.4
Pp3c23_21520 Physcomitrium patens HOM05D006093 ORTHO05D007652 4.4e-69 265.8 314 46.2
Pp3c8_24280 Physcomitrium patens HOM05D006093 ORTHO05D007652 3.7e-68 262.7 323 44.0
SHI11225 Sapria himalayana HOM05D006093 ORTHO05D007652 5.1e-65 252.3 246 56.1
Mapoly0015s0062 Marchantia polymorpha HOM05D006093 ORTHO05D007652 5.6e-64 248.8 233 52.8
Cfa001944 Carpinus fangiana HOM05D006093 ORTHO05D007652 5.2e-62 242.3 217 59.0
Psat6g066000 Pisum sativum HOM05D006093 ORTHO05D007652 2.9e-60 236.5 179 69.3
Pp3c24_20180 Physcomitrium patens HOM05D006093 ORTHO05D007652 5.1e-57 225.7 247 47.8
Eucgr.L03570 Eucalyptus grandis HOM05D006093 ORTHO05D007652 5.1e-49 199.1 125 78.4
Cre10.g428433 Chlamydomonas reinhardtii HOM05D006093 ORTHO05D007652 1.1e-48 198.0 244 46.3
PSO017G4202 Papaver somniferum HOM05D006093 ORTHO05D007652 1.9e-48 197.2 191 55.5
GSVIVG01026354001 Vitis vinifera HOM05D006093 ORTHO05D007652 4.8e-47 192.6 124 77.4
CBR_g884 Chara braunii HOM05D006093 ORTHO05D007652 1.1e-46 191.4 257 37.7
MCO15G481 Micromonas commoda HOM05D006093 ORTHO05D007652 6.4e-44 182.2 313 33.9
Cfa026683 Carpinus fangiana HOM05D006093 ORTHO05D007652 1.4e-35 154.5 255 34.1
SEGI_24777 Sequoiadendron giganteum HOM05D006093 ORTHO05D007652 1.4e-35 154.5 94 75.5
AL7G45760 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 5.7e-32 142.5 112 67.9
Actinidia08958 Actinidia chinensis HOM05D006093 ORTHO05D007652 2.1e-31 140.6 77 87.0
Gohir.D10G074901 Gossypium hirsutum HOM05D006093 ORTHO05D007652 2.8e-31 140.2 157 49.7
Dinv01702 Davidia involucrata HOM05D006093 ORTHO05D007652 6.2e-31 139.0 91 69.2
Oeu058023.3 Olea europaea HOM05D006093 ORTHO05D005440 9.0e-30 135.2 153 52.9
Dinv21460 Davidia involucrata HOM05D006093 ORTHO05D007652 3.4e-29 133.3 77 79.2
Cfa001945 Carpinus fangiana HOM05D006093 ORTHO05D007652 8.4e-28 128.6 327 32.4
Thecc.09G173900 Theobroma cacao HOM05D006093 ORTHO05D007652 2.8e-15 87.0 79 57.0
SEGI_39009 Sequoiadendron giganteum HOM05D006093 ORTHO05D007652 1.1e-14 85.1 130 40.8
Medtr3g118550 Medicago truncatula HOM05D006093 ORTHO05D007652 3.1e-14 83.6 134 42.5
Sabra14G0094900 Salix brachista HOM05D006093 ORTHO05D007652 2.9e-12 77.0 54 68.5
AL1G60750 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 9.4e-11 72.0 40 75.0
CARHR042620 Cardamine hirsuta HOM05D006093 ORTHO05D007652 1.2e-10 71.6 41 70.7
SGA_v2.0_scaffold72G24067 Striga asiatica HOM05D006093 ORTHO05D007652 2.6e-08 63.9 61 52.5
PRCOL_00006677 Prasinoderma coloniale HOM05D016293 ORTHO05D018978 4.4e-08 63.2 236 29.7
Mapoly0071s0039 Marchantia polymorpha HOM05D016293 ORTHO05D018978 4.1e-06 56.6 69 40.6


User provided reference genes

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