Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold304G47926 Striga asiatica HOM05D005387 ORTHO05D006711 8.2e-140 500.4 250 100.0
SGA_v2.0_scaffold1G00463 Striga asiatica HOM05D005387 ORTHO05D006711 2.1e-34 150.2 150 60.7
GSVIVG01011125001 Vitis vinifera HOM05D005387 ORTHO05D006711 4.7e-34 149.1 141 63.1
Oeu015966.1 Olea europaea HOM05D005387 ORTHO05D006711 6.1e-34 148.7 140 63.6
Psat1g104680 Pisum sativum HOM05D005387 ORTHO05D006711 6.1e-34 148.7 141 63.1
DCAR_002738 Daucus carota HOM05D005387 ORTHO05D006711 7.9e-34 148.3 125 68.0
Lj2A1174G27 Lonicera japonica HOM05D005387 ORTHO05D006711 7.9e-34 148.3 125 68.0
Nn4g26234 Nelumbo nucifera HOM05D005387 ORTHO05D006711 7.9e-34 148.3 125 68.0
PSO210G3721 Papaver somniferum HOM05D005387 ORTHO05D006711 7.9e-34 148.3 125 68.0
PSO832G0722 Papaver somniferum HOM05D005387 ORTHO05D006711 7.9e-34 148.3 125 68.0
SalBow4G1053 Salvia bowleyana HOM05D005387 ORTHO05D006711 7.9e-34 148.3 140 62.9
AUR62044301 Chenopodium quinoa HOM05D005387 ORTHO05D006711 1.0e-33 147.9 125 67.2
Dinv34746 Davidia involucrata HOM05D005387 ORTHO05D006711 1.0e-33 147.9 125 67.2
Migut.D00288 Erythranthe guttata HOM05D005387 ORTHO05D006711 1.0e-33 147.9 140 62.9
Duzib211G0289 Durio zibethinus HOM05D005387 ORTHO05D006711 1.8e-33 147.1 125 67.2
Hma1.2p1_0257F.1_g103540 Hydrangea macrophylla HOM05D005387 ORTHO05D006711 1.8e-33 147.1 125 67.2
Pp3c10_16570 Physcomitrium patens HOM05D005387 ORTHO05D006711 1.8e-33 147.1 125 68.0
TAR362G0175 Trochodendron aralioides HOM05D005387 ORTHO05D006711 1.8e-33 147.1 125 67.2
CSS0042122 Camellia sinensis var. sinensis HOM05D005387 ORTHO05D006711 2.3e-33 146.7 125 67.2
Cpa.g.sc52.27 Carica papaya HOM05D005387 ORTHO05D006711 2.3e-33 146.7 135 63.0
Thhalv10006888m.g Eutrema salsugineum HOM05D005387 ORTHO05D006711 2.3e-33 146.7 133 62.4
Gorai.004G081200 Gossypium raimondii HOM05D005387 ORTHO05D006711 2.3e-33 146.7 125 66.4
Potri.002G054000 Populus trichocarpa HOM05D005387 ORTHO05D006711 2.3e-33 146.7 141 61.7
HPP92_023768 Vanilla planifolia HOM05D005387 ORTHO05D006711 2.3e-33 146.7 125 67.2
ATR0626G059 Amborella trichopoda HOM05D005387 ORTHO05D006711 3.0e-33 146.4 125 67.2
Aqoxy5G00512 Aquilegia oxysepala HOM05D005387 ORTHO05D006711 3.0e-33 146.4 125 66.4
Carub.0001s0233 Capsella rubella HOM05D005387 ORTHO05D006711 3.0e-33 146.4 133 62.4
Eucgr.K03375 Eucalyptus grandis HOM05D005387 ORTHO05D006711 3.0e-33 146.4 141 61.0
MBI18_g32210_MAGBIO Magnolia biondii HOM05D005387 ORTHO05D006711 3.0e-33 146.4 125 67.2
Mapoly0059s0089 Marchantia polymorpha HOM05D005387 ORTHO05D006711 3.0e-33 146.4 125 67.2
Os05g0144800 Oryza sativa ssp. japonica HOM05D005387 ORTHO05D006711 3.0e-33 146.4 125 67.2
RcHm_v2.0_Chr6g0291151 Rosa chinensis HOM05D005387 ORTHO05D006711 3.0e-33 146.4 141 61.7
Zm00001eb417930 Zea mays HOM05D005387 ORTHO05D006711 3.0e-33 146.4 125 67.2
CDE06G0365 Ceratophyllum demersum HOM05D005387 ORTHO05D006711 3.9e-33 146.0 125 66.4
ClCG09G006960 Citrullus lanatus HOM05D005387 ORTHO05D006711 3.9e-33 146.0 125 66.4
Cc01_g19560 Coffea canephora HOM05D005387 ORTHO05D006711 3.9e-33 146.0 125 66.4
MELO3C015844.2 Cucumis melo HOM05D005387 ORTHO05D006711 3.9e-33 146.0 125 66.4
CsaV3_7G028200 Cucumis sativus L. HOM05D005387 ORTHO05D006711 3.9e-33 146.0 125 66.4
ECA247G0058 Erigeron canadensis HOM05D005387 ORTHO05D006711 3.9e-33 146.0 125 66.4
Gohir.A11G122400 Gossypium hirsutum HOM05D005387 ORTHO05D006711 3.9e-33 146.0 125 66.4
HanXRQChr10g0282751 Helianthus annuus HOM05D005387 ORTHO05D006711 3.9e-33 146.0 125 66.4
Medtr2g084735 Medicago truncatula HOM05D005387 ORTHO05D006711 3.9e-33 146.0 125 66.4
Sed0006598 Sechium edule HOM05D005387 ORTHO05D006711 3.9e-33 146.0 125 66.4
Thecc.01G280400 Theobroma cacao HOM05D005387 ORTHO05D006711 3.9e-33 146.0 125 66.4
TPR.G36709 Trifolium pratense HOM05D005387 ORTHO05D006711 3.9e-33 146.0 125 66.4
Actinidia09142 Actinidia chinensis HOM05D005387 ORTHO05D006711 6.7e-33 145.2 125 67.2
Aa31LG1G9340 Aethionema arabicum HOM05D005387 ORTHO05D006711 6.7e-33 145.2 125 65.6
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 6.7e-33 145.2 133 61.7
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 6.7e-33 145.2 133 61.7
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 6.7e-33 145.2 133 61.7
BolC8t46846H Brassica oleracea HOM05D005387 ORTHO05D006711 6.7e-33 145.2 133 61.7
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 6.7e-33 145.2 133 61.7
Gohir.D08G076600 Gossypium hirsutum HOM05D005387 ORTHO05D006711 6.7e-33 145.2 125 65.6
Manes.05G075500 Manihot esculenta HOM05D005387 ORTHO05D006711 6.7e-33 145.2 125 65.6
Rhsim13G0024300 Rhododendron simsii HOM05D005387 ORTHO05D006711 6.7e-33 145.2 125 67.2
Sopen06g003750 Solanum pennellii HOM05D005387 ORTHO05D006711 6.7e-33 145.2 140 62.9
vmacro02566 Vaccinium macrocarpon HOM05D005387 ORTHO05D006711 6.7e-33 145.2 125 67.2
Atru.chr5.1425 Acer truncatum HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
arahy.Tifrunner.gnm1.ann1.48M1R9 Arachis hypogaea HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
arahy.Tifrunner.gnm1.ann1.4E1RNV Arachis hypogaea HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
CANSAT25G2972 Cannabis sativa HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
Cfa006132 Carpinus fangiana HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
CiPaw.07G092300 Carya illinoinensis HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
AUR62034034 Chenopodium quinoa HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
AUR62044203 Chenopodium quinoa HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
AUR62044240 Chenopodium quinoa HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
Ciclev10018975m.g Citrus clementina HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
Haze_04719 Corylus avellana HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
FAN15G0991 Fragaria x ananassa HOM05D005387 ORTHO05D006711 8.8e-33 144.8 141 61.0
Glyma.02G082200 Glycine max HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
Glyma.16G167800 Glycine max HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
Gorai.007G136500 Gossypium raimondii HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
Lj2g0021203 Lotus japonicus HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
Phvul.004G095600 Phaseolus vulgaris HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
PGR044G0219 Punica granatum HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
QL12p022031 Quercus lobata HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
THA.LOC104825999 Tarenaya hassleriana HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
TWI23G0758 Tripterygium wilfordii HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
VMungo0464G1141 Vigna mungo HOM05D005387 ORTHO05D006711 8.8e-33 144.8 125 65.6
CAN.G1006.14 Capsicum annuum HOM05D005387 ORTHO05D006711 1.1e-32 144.4 140 62.9
MD03G1266200 Malus domestica HOM05D005387 ORTHO05D006711 1.1e-32 144.4 125 64.8
Nitab4.5_0006390g0070 Nicotiana tabacum HOM05D005387 ORTHO05D006711 1.1e-32 144.4 140 62.9
Peaxi162Scf00161g01216 Petunia axillaris HOM05D005387 ORTHO05D006711 1.1e-32 144.4 140 62.9
Prupe.8G242000 Prunus persica HOM05D005387 ORTHO05D006711 1.1e-32 144.4 125 64.8
FvH4_2g23690 Fragaria vesca HOM05D005387 ORTHO05D006711 1.5e-32 144.1 141 61.0
FAN24G0367 Fragaria x ananassa HOM05D005387 ORTHO05D006711 1.5e-32 144.1 141 61.0
Hund03003 Selenicereus undatus HOM05D005387 ORTHO05D006711 1.5e-32 144.1 125 65.6
AL1G12680 Arabidopsis lyrata HOM05D005387 ORTHO05D006711 2.6e-32 143.3 133 61.7
AT1G03190 Arabidopsis thaliana HOM05D005387 ORTHO05D006711 2.6e-32 143.3 133 61.7
Gohir.D11G127700 Gossypium hirsutum HOM05D005387 ORTHO05D006711 2.6e-32 143.3 125 64.8
Nitab4.5_0000295g0200 Nicotiana tabacum HOM05D005387 ORTHO05D006711 2.6e-32 143.3 141 62.4
SMO118G0087 Selaginella moellendorffii HOM05D005387 ORTHO05D006711 2.6e-32 143.3 133 61.7
Solyc06g008970.4 Solanum lycopersicum HOM05D005387 ORTHO05D006711 2.6e-32 143.3 140 62.1
Sp1g02210 Schrenkiella parvula HOM05D005387 ORTHO05D006711 3.3e-32 142.9 133 62.4
AagrBONN_evm.TU.Sc2ySwM_228.154 Anthoceros agrestis HOM05D005387 ORTHO05D006711 9.7e-32 141.4 125 66.4
Lalb_Chr01g0009611 Lupinus albus HOM05D005387 ORTHO05D006711 1.3e-31 141.0 125 64.8
Gohir.A08G068200 Gossypium hirsutum HOM05D005387 ORTHO05D006711 1.7e-31 140.6 125 64.8
MCO11G848 Micromonas commoda HOM05D005387 ORTHO05D006711 6.3e-31 138.7 128 60.9
Cre17.g706300 Chlamydomonas reinhardtii HOM05D005387 ORTHO05D006711 8.2e-31 138.3 124 64.5
Thhalv10011297m.g Eutrema salsugineum HOM05D005387 ORTHO05D006711 8.2e-31 138.3 130 60.0
MD11G1286800 Malus domestica HOM05D005387 ORTHO05D006711 2.4e-30 136.7 125 62.4
PRCOL_00002595 Prasinoderma coloniale HOM05D005387 ORTHO05D006711 7.0e-30 135.2 125 61.6
SHI14548 Sapria himalayana HOM05D005387 ORTHO05D006711 1.2e-29 134.4 125 62.4
AUR62007973 Chenopodium quinoa HOM05D005387 ORTHO05D006711 3.5e-29 132.9 131 61.1
EL10Ac6g13926 Beta vulgaris HOM05D005387 ORTHO05D006711 1.3e-28 131.0 178 47.8
HPP92_026404 Vanilla planifolia HOM05D005387 ORTHO05D006711 1.0e-25 121.3 107 65.4
CARHR002530 Cardamine hirsuta HOM05D005387 ORTHO05D006711 5.7e-24 115.5 90 66.7
Ca_24177_v3 Cicer arietinum L. HOM05D002851 ORTHO05D003084 4.8e-23 112.5 92 69.6
Haze_26829 Corylus avellana HOM05D005387 ORTHO05D006711 2.7e-21 106.7 132 48.5
COL.COLO4_09105 Corchorus olitorius HOM05D005387 ORTHO05D006711 1.8e-17 94.0 73 65.8
AUR62017677 Chenopodium quinoa HOM05D005387 ORTHO05D006711 8.8e-17 91.7 63 69.8
AUR62025818 Chenopodium quinoa HOM05D005387 ORTHO05D006711 2.0e-16 90.5 63 69.8
SHI33552 Sapria himalayana HOM05D005387 ORTHO05D006711 4.4e-16 89.4 83 56.6
BolC8t52806H Brassica oleracea HOM05D005387 ORTHO05D006711 4.0e-09 66.2 73 53.4
C08p52900 Brassica napus HOM05D005387 ORTHO05D006711 8.8e-09 65.1 73 53.4
AUR62025819 Chenopodium quinoa HOM05D005387 ORTHO05D006711 2.6e-08 63.5 65 60.0
Sabra02G0043900 Salix brachista HOM05D005387 ORTHO05D006711 2.6e-08 63.5 60 63.3
CBR_g47089 Chara braunii HOM05D005387 ORTHO05D006711 3.7e-07 59.7 60 61.7


User provided reference genes

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