Gene: SHI33552

General Information

Structural Information

  • Species Sapria himalayana
  • Gene Identifier SHI33552
  • Transcript Identifier SHI33552-RA
  • Gene Type Coding gene
  • Location scaffold102_1291821 : 587749-601090 : positive

Gene Family Information

  • ID HOM05D005387
  • #Genes/#Species 141/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid SHI33552-RA

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006139
IEA
InterPronucleobase-containing compound metabolic process
GO:0015074
IEA
InterProDNA integration
GO:0006289
IEA
InterPronucleotide-excision repair
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT1G03190
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc06g008970.4
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT1G03190
GO:0009411
ISO
PLAZA Integrative Orthologyresponse to UV AT1G03190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003678
IEA
InterProDNA helicase activity
GO:0005524
IEA
InterProATP binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004386
IEA
InterProhelicase activity
GO:0016818
IEA
InterProhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G03190
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc06g008970.4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010614 DEAD2
IPR013020 ATP-dependent helicase Rad3/Chl1-like
IPR006555 ATP-dependent helicase, C-terminal
IPR012337 Ribonuclease H-like superfamily
IPR036397 Ribonuclease H superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001584 Integrase, catalytic core
IPR045028 Helicase superfamily 1/2, DinG/Rad3-like
IPR001945 RAD3/XPD family
IPR010643 Helical and beta-bridge domain
IPR006554 Helicase-like, DEXD box c2 type
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
Mapman id Description
14.6.3.2.1 DNA damage response.nucleotide excision repair (NER).multi-functional TFIIh complex.core module.subunit XPD
15.3.3.5.1.1 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIh basal transcription factor complex.core module.component RAD3/XPD