Gene: CBR_g47089
General Information
Structural Information
- Species Chara braunii
- Gene Identifier CBR_g47089
- Transcript Identifier GBG88390
- Gene Type Coding gene
- Location BFEA01000669 : 361179-392962 : positive
Gene Family Information
- ID HOM05D005387
- #Genes/#Species 141/97
- Phylogenetic origin
- ID ORTHO05D006711
- #Genes/#Species 139/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid GBG88390
- uniprot A0A388M1E2
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | Solyc06g008970.4 |
GO:0006281 | IEA | GOA Database | DNA repair | |
GO:0009411 | IEA | GOA Database | response to UV | |
GO:0009408 | IEA | GOA Database | response to heat | |
GO:0006289 | IEA | GOA Database | nucleotide-excision repair | |
GO:0006289 | IEA | InterPro | nucleotide-excision repair | |
GO:0006139 | IEA | GOA Database | nucleobase-containing compound metabolic process | |
GO:0006139 | IEA | InterPro | nucleobase-containing compound metabolic process | |
GO:0032508 | IEA | GOA Database | DNA duplex unwinding |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000166 | IEA | GOA Database | nucleotide binding | |
GO:0003724 | ISO | PLAZA Integrative Orthology | RNA helicase activity | Solyc06g008970.4 |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G03190 |
GO:0016818 | IEA | GOA Database | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | |
GO:0016818 | IEA | InterPro | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | |
GO:0003676 | IEA | GOA Database | nucleic acid binding | |
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0003677 | IEA | GOA Database | DNA binding | |
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0005524 | IEA | GOA Database | ATP binding | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0004386 | IEA | GOA Database | helicase activity | |
GO:0004386 | IEA | InterPro | helicase activity | |
GO:0003678 | IEA | GOA Database | DNA helicase activity | |
GO:0003678 | IEA | InterPro | DNA helicase activity | |
GO:0016787 | IEA | GOA Database | hydrolase activity | |
GO:0016787 | IEA | InterPro | hydrolase activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | GOA Database | nucleus | |
GO:0005634 | IEA | InterPro | nucleus |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR045028 | Helicase superfamily 1/2, DinG/Rad3-like |
IPR013020 | ATP-dependent helicase Rad3/Chl1-like |
IPR001945 | RAD3/XPD family |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
IPR006935 | Helicase/UvrB, N-terminal |
IPR006555 | ATP-dependent helicase, C-terminal |
IPR006554 | Helicase-like, DEXD box c2 type |
IPR010614 | DEAD2 |
IPR010643 | Helical and beta-bridge domain |
Mapman id | Description |
---|---|
14.6.3.2.1 | DNA damage response.nucleotide excision repair (NER).multi-functional TFIIh complex.core module.subunit XPD |
15.3.3.5.1.1 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIh basal transcription factor complex.core module.component RAD3/XPD |