Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37638 Sequoiadendron giganteum HOM05D009907 ORTHO05D001545 1.9e-267 925.2 462 100.0
SEGI_06874 Sequoiadendron giganteum HOM05D009907 ORTHO05D004052 3.3e-86 323.2 487 43.3
SEGI_12898 Sequoiadendron giganteum HOM05D009907 ORTHO05D004052 7.4e-78 295.4 500 40.2
SEGI_10389 Sequoiadendron giganteum HOM05D009907 ORTHO05D000062 3.6e-72 276.6 346 49.4
SEGI_30384 Sequoiadendron giganteum HOM05D009907 ORTHO05D006441 4.5e-51 206.5 144 75.0
SEGI_08431 Sequoiadendron giganteum HOM05D009907 ORTHO05D000062 1.9e-49 201.1 370 41.6
SEGI_19906 Sequoiadendron giganteum HOM05D009907 ORTHO05D000062 1.2e-48 198.4 149 69.8
SEGI_11149 Sequoiadendron giganteum HOM05D009907 ORTHO05D000062 2.3e-47 194.1 176 59.7
SEGI_10866 Sequoiadendron giganteum HOM05D009907 ORTHO05D000062 2.7e-43 180.6 176 58.0
SEGI_40517 Sequoiadendron giganteum HOM05D009907 ORTHO05D000001 1.3e-42 178.3 149 63.1
SEGI_23168 Sequoiadendron giganteum HOM05D009907 ORTHO05D000062 1.2e-40 171.8 149 59.1
SEGI_13532 Sequoiadendron giganteum HOM05D009907 ORTHO05D001565 1.4e-36 158.3 137 64.2
SEGI_12403 Sequoiadendron giganteum HOM05D009907 ORTHO05D000853 1.7e-34 151.4 134 62.7
SEGI_37814 Sequoiadendron giganteum HOM05D003404 ORTHO05D004052 5.0e-34 149.8 169 52.1
SEGI_36214 Sequoiadendron giganteum HOM05D009907 ORTHO05D004052 2.1e-32 144.4 135 59.3
SEGI_04108 Sequoiadendron giganteum HOM05D009907 ORTHO05D050970 1.1e-31 142.1 142 59.2
SEGI_24287 Sequoiadendron giganteum HOM05D009907 ORTHO05D004052 1.3e-26 125.2 90 70.0
SEGI_15463 Sequoiadendron giganteum HOM05D009907 ORTHO05D004052 3.9e-26 123.6 92 70.7
SEGI_23908 Sequoiadendron giganteum HOM05D003829 ORTHO05D004052 1.5e-25 121.7 98 63.3
unitig_0.g553 Utricularia gibba HOM05D000228 ORTHO05D001545 4.9e-21 106.7 122 54.9
SEGI_24851 Sequoiadendron giganteum HOM05D000228 ORTHO05D001545 1.1e-20 105.5 112 58.0
SGA_v2.0_scaffold127G34014 Striga asiatica HOM05D000228 ORTHO05D001545 1.4e-20 105.1 151 47.7
Oeu039718.1 Olea europaea HOM05D000228 ORTHO05D001545 1.9e-20 104.8 112 58.0
SGA_v2.0_scaffold116G32283 Striga asiatica HOM05D000228 ORTHO05D001545 2.4e-20 104.4 151 47.7
EL10Ac6g13333 Beta vulgaris HOM05D000228 ORTHO05D001545 3.2e-20 104.0 112 57.1
Cc08_g04850 Coffea canephora HOM05D000228 ORTHO05D001545 3.2e-20 104.0 59 86.4
Ah.03g134280 Amaranthus hybridus HOM05D000228 ORTHO05D001545 4.1e-20 103.6 112 57.1
Glyma.11G081200 Glycine max HOM05D000228 ORTHO05D001545 4.1e-20 103.6 112 57.1
Lalb_Chr16g0377361 Lupinus albus HOM05D000228 ORTHO05D001545 4.1e-20 103.6 112 57.1
Nn6g31908 Nelumbo nucifera HOM05D000228 ORTHO05D001545 4.1e-20 103.6 112 57.1
Oeu012551.1 Olea europaea HOM05D000228 ORTHO05D001545 4.1e-20 103.6 112 57.1
VMungo1215G1821 Vigna mungo HOM05D000228 ORTHO05D001545 4.1e-20 103.6 112 57.1
Os05g0151000 Oryza sativa ssp. japonica HOM05D000228 ORTHO05D001545 5.4e-20 103.2 112 56.2
Phvul.002G104500 Phaseolus vulgaris HOM05D000228 ORTHO05D001545 5.4e-20 103.2 100 59.0
Hund16621 Selenicereus undatus HOM05D000228 ORTHO05D001545 7.1e-20 102.8 112 56.2
Glyma.09G278900 Glycine max HOM05D000228 ORTHO05D001545 9.2e-20 102.4 112 55.4
Cfa007031 Carpinus fangiana HOM05D000228 ORTHO05D001545 1.2e-19 102.1 185 41.6
Ciclev10024686m.g Citrus clementina HOM05D000228 ORTHO05D001545 1.2e-19 102.1 112 55.4
Cc07_g11340 Coffea canephora HOM05D000228 ORTHO05D001545 1.2e-19 102.1 100 58.0
Haze_03702 Corylus avellana HOM05D000228 ORTHO05D001545 1.2e-19 102.1 185 41.6
Glyma.01G162200 Glycine max HOM05D000228 ORTHO05D001545 1.2e-19 102.1 112 56.2
Lalb_Chr09g0321431 Lupinus albus HOM05D000228 ORTHO05D001545 1.2e-19 102.1 112 56.2
MBI11_g09467_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D001545 1.2e-19 102.1 100 58.0
PSO541G3277 Papaver somniferum HOM05D000228 ORTHO05D001545 1.2e-19 102.1 100 58.0
PSO675G5068 Papaver somniferum HOM05D000228 ORTHO05D001545 1.2e-19 102.1 100 58.0
TAR376G0725 Trochodendron aralioides HOM05D000228 ORTHO05D001545 1.2e-19 102.1 100 58.0
Zm00001eb416050 Zea mays HOM05D000228 ORTHO05D001545 1.2e-19 102.1 112 56.2
TAR628G0489 Trochodendron aralioides HOM05D000228 ORTHO05D001545 1.6e-19 101.7 100 57.0
AUR62026224 Chenopodium quinoa HOM05D000228 ORTHO05D001545 2.1e-19 101.3 112 55.4
AUR62026407 Chenopodium quinoa HOM05D000228 ORTHO05D001545 2.1e-19 101.3 112 55.4
DCAR_016740 Daucus carota HOM05D000228 ORTHO05D001545 2.1e-19 101.3 151 45.7
Dinv39555 Davidia involucrata HOM05D000228 ORTHO05D001545 2.1e-19 101.3 112 55.4
Lalb_Chr17g0338771 Lupinus albus HOM05D000228 ORTHO05D001545 2.1e-19 101.3 112 56.2
Medtr5g023020 Medicago truncatula HOM05D000228 ORTHO05D001545 2.1e-19 101.3 59 84.7
CiPaw.07G063400 Carya illinoinensis HOM05D000228 ORTHO05D001545 2.7e-19 100.9 185 41.1
Gohir.A02G174500 Gossypium hirsutum HOM05D000228 ORTHO05D001545 2.7e-19 100.9 112 55.4
Gohir.A11G171700 Gossypium hirsutum HOM05D000228 ORTHO05D001545 2.7e-19 100.9 112 55.4
Gohir.D03G005300 Gossypium hirsutum HOM05D000228 ORTHO05D001545 2.7e-19 100.9 112 55.4
Gohir.D11G178600 Gossypium hirsutum HOM05D000228 ORTHO05D001545 2.7e-19 100.9 112 55.4
Gorai.003G005700 Gossypium raimondii HOM05D000228 ORTHO05D001545 2.7e-19 100.9 112 55.4
Gorai.007G190500 Gossypium raimondii HOM05D000228 ORTHO05D001545 2.7e-19 100.9 112 55.4
Lj4C801G10 Lonicera japonica HOM05D000228 ORTHO05D001545 2.7e-19 100.9 112 55.4
Lj2g0016023 Lotus japonicus HOM05D000228 ORTHO05D001545 2.7e-19 100.9 112 55.4
Psat2g151880 Pisum sativum HOM05D000228 ORTHO05D001545 2.7e-19 100.9 112 55.4
Thecc.01G011300 Theobroma cacao HOM05D000228 ORTHO05D001545 2.7e-19 100.9 112 55.4
CSS0034780 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D001545 3.5e-19 100.5 59 83.1
CSS0036491 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D001545 3.5e-19 100.5 59 83.1
CDE02G1347 Ceratophyllum demersum HOM05D000228 ORTHO05D001545 3.5e-19 100.5 112 55.4
CDE04G2464 Ceratophyllum demersum HOM05D000228 ORTHO05D001545 3.5e-19 100.5 112 55.4
Sed0006002 Sechium edule HOM05D000228 ORTHO05D001545 3.5e-19 100.5 100 57.0
Sc03g0003780 Simmondsia chinensis HOM05D000228 ORTHO05D001545 3.5e-19 100.5 112 55.4
Atru.chr3.911 Acer truncatum HOM05D000228 ORTHO05D001545 4.6e-19 100.1 112 54.5
Ca_24944_v3 Cicer arietinum L. HOM05D000228 ORTHO05D001545 4.6e-19 100.1 112 55.4
Dinv31892 Davidia involucrata HOM05D000228 ORTHO05D001545 4.6e-19 100.1 112 55.4
Hma1.2p1_1598F.1_g292950 Hydrangea macrophylla HOM05D000228 ORTHO05D001545 4.6e-19 100.1 112 55.4
GSVIVG01008740001 Vitis vinifera HOM05D000228 ORTHO05D001545 4.6e-19 100.1 112 55.4
Aqoxy5G01098 Aquilegia oxysepala HOM05D000228 ORTHO05D001545 6.0e-19 99.8 100 57.0
arahy.Tifrunner.gnm1.ann1.FVA0CM Arachis hypogaea HOM05D000228 ORTHO05D001545 6.0e-19 99.8 112 56.2
arahy.Tifrunner.gnm1.ann1.XNR9AR Arachis hypogaea HOM05D000228 ORTHO05D001545 6.0e-19 99.8 112 56.2
ClCG10G000460 Citrullus lanatus HOM05D000228 ORTHO05D001545 6.0e-19 99.8 100 57.0
MELO3C013741.2 Cucumis melo HOM05D000228 ORTHO05D001545 6.0e-19 99.8 100 57.0
Duzib145G0004 Durio zibethinus HOM05D000228 ORTHO05D001545 6.0e-19 99.8 112 54.5
Duzib187G1668 Durio zibethinus HOM05D000228 ORTHO05D001545 6.0e-19 99.8 112 54.5
Eucgr.I02304 Eucalyptus grandis HOM05D000228 ORTHO05D001545 6.0e-19 99.8 112 54.5
PGSC0003DMG400003590 Solanum tuberosum HOM05D000228 ORTHO05D001545 6.0e-19 99.8 151 45.7
Actinidia29769 Actinidia chinensis HOM05D000228 ORTHO05D001545 7.8e-19 99.4 112 54.5
Dinv40146 Davidia involucrata HOM05D000228 ORTHO05D001545 7.8e-19 99.4 112 54.5
Eucgr.F01570 Eucalyptus grandis HOM05D000228 ORTHO05D001545 7.8e-19 99.4 59 81.4
vmacro04378 Vaccinium macrocarpon HOM05D000228 ORTHO05D001545 7.8e-19 99.4 112 54.5
Aa31LG6G12760 Aethionema arabicum HOM05D000228 ORTHO05D001545 1.0e-18 99.0 112 54.5
AL7G15270 Arabidopsis lyrata HOM05D000228 ORTHO05D001545 1.0e-18 99.0 112 54.5
AT4G35800 Arabidopsis thaliana HOM05D000228 ORTHO05D001545 1.0e-18 99.0 112 54.5
BcaC01g00521 Brassica carinata HOM05D000315 ORTHO05D001545 1.0e-18 99.0 112 54.5
BcaC01g00522 Brassica carinata HOM05D000228 ORTHO05D001545 1.0e-18 99.0 112 54.5
BcaC07g38102 Brassica carinata HOM05D000228 ORTHO05D001545 1.0e-18 99.0 112 54.5
C03p80930 Brassica napus HOM05D000228 ORTHO05D001545 1.0e-18 99.0 112 54.5
BolC3t20350H Brassica oleracea HOM05D000228 ORTHO05D001545 1.0e-18 99.0 112 54.5
BraA08t34114Z Brassica rapa HOM05D000228 ORTHO05D001545 1.0e-18 99.0 112 54.5
Carub.0007s0443 Capsella rubella HOM05D000228 ORTHO05D001545 1.0e-18 99.0 112 54.5
CARHR244170 Cardamine hirsuta HOM05D000228 ORTHO05D001545 1.0e-18 99.0 112 54.5
Thhalv10024193m.g Eutrema salsugineum HOM05D000228 ORTHO05D001545 1.0e-18 99.0 112 54.5
Sp7g33590 Schrenkiella parvula HOM05D000228 ORTHO05D001545 1.0e-18 99.0 112 54.5
THA.LOC104804281 Tarenaya hassleriana HOM05D000228 ORTHO05D001545 1.0e-18 99.0 112 54.5
ECA247G3915 Erigeron canadensis HOM05D000228 ORTHO05D001545 1.3e-18 98.6 151 45.0
HanXRQChr04g0107401 Helianthus annuus HOM05D000228 ORTHO05D001545 1.3e-18 98.6 112 54.5
Lsat_1_v5_gn_1_12220 Lactuca sativa HOM05D000228 ORTHO05D001545 1.3e-18 98.6 112 54.5
TPR.G25137 Trifolium pratense HOM05D000228 ORTHO05D001545 1.3e-18 98.6 112 54.5
ATR0661G313 Amborella trichopoda HOM05D000228 ORTHO05D001545 1.7e-18 98.2 112 54.5
CAN.G890.26 Capsicum annuum HOM05D000228 ORTHO05D001545 1.7e-18 98.2 112 54.5
COL.COLO4_22497 Corchorus olitorius HOM05D000228 ORTHO05D001545 1.7e-18 98.2 112 54.5
FAN19G0156 Fragaria x ananassa HOM05D000228 ORTHO05D001545 1.7e-18 98.2 112 53.6
FAN23G1904 Fragaria x ananassa HOM05D000228 ORTHO05D001545 1.7e-18 98.2 112 53.6
FAN26G3056 Fragaria x ananassa HOM05D000228 ORTHO05D001545 1.7e-18 98.2 112 53.6
FAN28G2440 Fragaria x ananassa HOM05D000228 ORTHO05D001545 1.7e-18 98.2 112 53.6
Nitab4.5_0006892g0040 Nicotiana tabacum HOM05D000228 ORTHO05D001545 1.7e-18 98.2 112 54.5
RcHm_v2.0_Chr2g0098321 Rosa chinensis HOM05D000228 ORTHO05D001545 1.7e-18 98.2 112 53.6
BcaNung04874 Brassica carinata HOM05D000228 ORTHO05D001545 2.3e-18 97.8 112 53.6
A01p02890 Brassica napus HOM05D000228 ORTHO05D001545 2.3e-18 97.8 112 53.6
C01p03210 Brassica napus HOM05D000228 ORTHO05D001545 2.3e-18 97.8 112 53.6
BraA01t00274Z Brassica rapa HOM05D000315 ORTHO05D001545 2.3e-18 97.8 112 53.6
MD02G1123400 Malus domestica HOM05D000228 ORTHO05D001545 2.3e-18 97.8 112 51.8
MD15G1237200 Malus domestica HOM05D000228 ORTHO05D001545 2.3e-18 97.8 112 51.8
Prupe.7G175200 Prunus persica HOM05D000228 ORTHO05D001545 2.3e-18 97.8 112 51.8
Actinidia17401 Actinidia chinensis HOM05D000228 ORTHO05D001545 3.0e-18 97.4 100 55.0
Migut.N01734 Erythranthe guttata HOM05D000228 ORTHO05D001545 3.0e-18 97.4 112 53.6
Nitab4.5_0001696g0010 Nicotiana tabacum HOM05D000228 ORTHO05D001545 3.0e-18 97.4 112 54.5
PGR119G0284 Punica granatum HOM05D000228 ORTHO05D001545 3.0e-18 97.4 112 53.6
Solyc02g083350.4 Solanum lycopersicum HOM05D000228 ORTHO05D001545 3.0e-18 97.4 112 54.5
Sopen02g028130 Solanum pennellii HOM05D000228 ORTHO05D001545 3.0e-18 97.4 112 54.5
Ah.02g129100 Amaranthus hybridus HOM05D000228 ORTHO05D001545 3.9e-18 97.1 59 81.4
arahy.Tifrunner.gnm1.ann1.9K73PE Arachis hypogaea HOM05D000228 ORTHO05D001545 5.1e-18 96.7 151 42.4
Psat5g200440 Pisum sativum HOM05D000228 ORTHO05D001545 5.1e-18 96.7 59 79.7
QL06p052095 Quercus lobata HOM05D000228 ORTHO05D001545 6.6e-18 96.3 112 52.7
vmacro20497 Vaccinium macrocarpon HOM05D000228 ORTHO05D001545 6.6e-18 96.3 59 79.7
CsaV3_3G000490 Cucumis sativus L. HOM05D000228 ORTHO05D001545 8.7e-18 95.9 100 56.0
arahy.Tifrunner.gnm1.ann1.J6X5FL Arachis hypogaea HOM05D000228 ORTHO05D001545 1.1e-17 95.5 151 42.4
FvH4_1g11070 Fragaria vesca HOM05D000228 ORTHO05D001545 1.1e-17 95.5 59 79.7
FAN23G0813 Fragaria x ananassa HOM05D000228 ORTHO05D001545 1.1e-17 95.5 59 79.7
Peaxi162Scf00328g00128 Petunia axillaris HOM05D000228 ORTHO05D001545 1.1e-17 95.5 112 53.6
Pp3c14_14540 Physcomitrium patens HOM05D000228 ORTHO05D001545 1.1e-17 95.5 175 41.1
Aqoxy5G00747 Aquilegia oxysepala HOM05D000228 ORTHO05D001545 1.5e-17 95.1 112 54.5
BcaNung00792 Brassica carinata HOM05D000228 ORTHO05D001545 1.5e-17 95.1 112 52.7
TWI09G0739 Tripterygium wilfordii HOM05D000228 ORTHO05D001545 1.5e-17 95.1 112 52.7
FAN19G0561 Fragaria x ananassa HOM05D000228 ORTHO05D001545 1.9e-17 94.7 59 79.7
Manes.01G151000 Manihot esculenta HOM05D000228 ORTHO05D001545 1.9e-17 94.7 112 53.6
SMO203G0153 Selaginella moellendorffii HOM05D000228 ORTHO05D001545 1.9e-17 94.7 112 54.5
SEGI_22514 Sequoiadendron giganteum HOM05D009907 ORTHO05D004343 1.9e-17 94.7 75 64.0
arahy.Tifrunner.gnm1.ann1.FL0A4X Arachis hypogaea HOM05D000228 ORTHO05D001545 2.5e-17 94.4 151 41.7
Sabra05G0088100 Salix brachista HOM05D000228 ORTHO05D001545 2.5e-17 94.4 112 52.7
arahy.Tifrunner.gnm1.ann1.BXI6FM Arachis hypogaea HOM05D000228 ORTHO05D001545 3.3e-17 94.0 151 41.7
Pp3c1_32300 Physcomitrium patens HOM05D000228 ORTHO05D001545 3.3e-17 94.0 160 43.1
Potri.005G107600 Populus trichocarpa HOM05D000228 ORTHO05D001545 4.3e-17 93.6 112 51.8
Mapoly0070s0048 Marchantia polymorpha HOM05D000228 ORTHO05D001545 5.6e-17 93.2 112 52.7
arahy.Tifrunner.gnm1.ann1.248CB6 Arachis hypogaea HOM05D000228 ORTHO05D001545 7.3e-17 92.8 59 74.6
FAN28G1830 Fragaria x ananassa HOM05D000228 ORTHO05D001545 7.3e-17 92.8 59 78.0
arahy.Tifrunner.gnm1.ann1.32E6CA Arachis hypogaea HOM05D000228 ORTHO05D001545 9.6e-17 92.4 59 74.6
FAN26G0663 Fragaria x ananassa HOM05D000228 ORTHO05D001545 9.6e-17 92.4 111 51.4
Lj4C226G8 Lonicera japonica HOM05D000228 ORTHO05D001545 1.6e-16 91.7 147 44.9
SGA_v2.0_scaffold15G07314 Striga asiatica HOM05D000228 ORTHO05D001545 1.6e-16 91.7 100 52.0
ECA233G2080 Erigeron canadensis HOM05D000228 ORTHO05D001545 2.8e-16 90.9 59 72.9
Ciclev10001675m.g Citrus clementina HOM05D000228 ORTHO05D001545 3.6e-16 90.5 59 74.6
MD02G1123200 Malus domestica HOM05D000228 ORTHO05D001545 3.6e-16 90.5 59 76.3
CBR_g42147 Chara braunii HOM05D000228 ORTHO05D001545 4.7e-16 90.1 222 35.1
RcHm_v2.0_Chr2g0098331 Rosa chinensis HOM05D000228 ORTHO05D001545 4.7e-16 90.1 111 51.4
SEGI_13624 Sequoiadendron giganteum HOM05D000228 ORTHO05D001545 4.7e-16 90.1 112 49.1
Rhsim10G0205500 Rhododendron simsii HOM05D000228 ORTHO05D001545 6.2e-16 89.7 59 76.3
RhsimUnG0152400 Rhododendron simsii HOM05D000228 ORTHO05D001545 6.2e-16 89.7 59 76.3
Ciclev10004088m.g Citrus clementina HOM05D000228 ORTHO05D001545 8.1e-16 89.4 59 72.9
HPP92_022754 Vanilla planifolia HOM05D000228 ORTHO05D001545 1.1e-15 89.0 112 49.1
ECA233G0514 Erigeron canadensis HOM05D000228 ORTHO05D001545 1.4e-15 88.6 100 49.0
ECA233G5495 Erigeron canadensis HOM05D000228 ORTHO05D001545 1.4e-15 88.6 100 50.0
SEGI_12811 Sequoiadendron giganteum HOM05D000020 ORTHO05D000543 1.4e-15 88.6 73 65.8
Lj5g0025773 Lotus japonicus HOM05D000228 ORTHO05D001545 4.0e-15 87.0 69 66.7
MCO15G374 Micromonas commoda HOM05D000228 ORTHO05D001545 1.2e-14 85.5 62 72.6
PRCOL_00006783 Prasinoderma coloniale HOM05D000228 ORTHO05D001545 7.6e-14 82.8 59 67.8
SEGI_35555 Sequoiadendron giganteum HOM05D009907 ORTHO05D004775 6.4e-13 79.7 72 54.2
SEGI_12027 Sequoiadendron giganteum HOM05D000119 ORTHO05D000054 1.4e-12 78.6 57 70.2
SEGI_29833 Sequoiadendron giganteum HOM05D009907 ORTHO05D384949 1.7e-10 71.6 49 75.5
SEGI_36038 Sequoiadendron giganteum HOM05D009907 ORTHO05D000002 2.3e-10 71.2 63 58.7
Cre16.g680900 Chlamydomonas reinhardtii HOM05D000228 ORTHO05D001545 1.5e-09 68.6 56 64.3
SEGI_31747 Sequoiadendron giganteum HOM05D009907 ORTHO05D000853 8.1e-08 62.8 43 74.4
CSS0032530 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D001545 1.1e-07 62.4 37 78.4
A08p21640 Brassica napus HOM05D000228 ORTHO05D001545 3.4e-06 57.4 36 75.0
SEGI_35331 Sequoiadendron giganteum HOM05D000038 ORTHO05D000689 5.8e-06 56.6 47 63.8


User provided reference genes

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