Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06131 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 3.7e-75 285.0 171 100.0
SEGI_10572 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 3.7e-75 285.0 171 100.0
SEGI_23144 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 3.7e-75 285.0 171 100.0
SEGI_23653 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 2.4e-42 176.0 139 71.2
SEGI_01799 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 1.2e-41 173.7 145 68.3
SEGI_05793 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 1.2e-41 173.7 145 68.3
SEGI_17452 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 1.2e-41 173.7 145 68.3
SEGI_38027 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 1.2e-41 173.7 145 68.3
SEGI_03786 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 2.1e-38 162.9 146 67.1
SEGI_06862 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 4.9e-27 125.2 139 56.1
SEGI_11213 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 4.9e-27 125.2 139 56.1
SEGI_27710 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 3.2e-26 122.5 142 53.5
SEGI_39552 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 1.2e-25 120.6 159 50.3
SEGI_39612 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 1.2e-25 120.6 159 50.3
SEGI_08399 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 2.1e-25 119.8 142 51.4
SEGI_29575 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 3.0e-24 115.9 108 64.8
SEGI_01650 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 3.1e-21 105.9 135 47.4
SEGI_29010 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 3.1e-21 105.9 147 46.3
Potri.002G226700 Populus trichocarpa HOM05D000399 ORTHO05D000304 1.7e-11 73.6 162 34.6
Duzib138G0147 Durio zibethinus HOM05D000399 ORTHO05D000304 1.9e-10 70.1 155 35.5
ATR0681G349 Amborella trichopoda HOM05D000399 ORTHO05D000304 2.5e-10 69.7 166 31.3
Os06g0358800 Oryza sativa ssp. japonica HOM05D000399 ORTHO05D000304 2.5e-10 69.7 158 33.5
SEGI_26831 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 2.5e-10 69.7 166 33.7
COL.COLO4_21840 Corchorus olitorius HOM05D000399 ORTHO05D000304 7.1e-10 68.2 149 32.9
SEGI_34063 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 7.1e-10 68.2 166 32.5
Manes.13G068400 Manihot esculenta HOM05D000399 ORTHO05D000304 9.3e-10 67.8 159 35.2
Zm00001eb346320 Zea mays HOM05D000399 ORTHO05D000304 4.6e-09 65.5 154 31.8
Gohir.A07G186300 Gossypium hirsutum HOM05D000399 ORTHO05D000304 6.1e-09 65.1 155 33.5
Zm00001eb042770 Zea mays HOM05D000399 ORTHO05D000304 7.9e-09 64.7 156 30.8
Gohir.A11G154100 Gossypium hirsutum HOM05D000399 ORTHO05D000304 1.0e-08 64.3 155 32.9
Gohir.D07G192800 Gossypium hirsutum HOM05D000399 ORTHO05D000304 1.0e-08 64.3 155 32.9
Gorai.001G215700 Gossypium raimondii HOM05D000399 ORTHO05D000304 1.0e-08 64.3 155 32.3
AagrBONN_evm.TU.Sc2ySwM_344.1176 Anthoceros agrestis HOM05D000399 ORTHO05D000304 2.3e-08 63.2 152 29.6
CDE11G1088 Ceratophyllum demersum HOM05D000399 ORTHO05D000304 2.3e-08 63.2 159 30.8
Ciclev10016164m.g Citrus clementina HOM05D000399 ORTHO05D000304 3.0e-08 62.8 149 33.6
Duzib133G0461 Durio zibethinus HOM05D000399 ORTHO05D000304 3.0e-08 62.8 149 33.6
TPR.G27598 Trifolium pratense HOM05D000399 ORTHO05D000304 3.0e-08 62.8 159 31.4
Atru.chr6.3232 Acer truncatum HOM05D000399 ORTHO05D000304 3.9e-08 62.4 162 32.1
CiPaw.11G011600 Carya illinoinensis HOM05D000399 ORTHO05D000304 3.9e-08 62.4 155 32.9
CsaV3_7G003390 Cucumis sativus L. HOM05D000399 ORTHO05D000304 5.1e-08 62.0 156 28.8
Medtr3g080000 Medicago truncatula HOM05D000399 ORTHO05D000304 5.1e-08 62.0 157 31.2
Os03g0121800 Oryza sativa ssp. japonica HOM05D000399 ORTHO05D000304 6.7e-08 61.6 152 28.9
PGR031G2788 Punica granatum HOM05D000399 ORTHO05D000304 6.7e-08 61.6 152 30.3
MELO3C018835.2 Cucumis melo HOM05D000399 ORTHO05D000304 8.7e-08 61.2 151 29.1
Cpa.g.sc87.111 Carica papaya HOM05D000399 ORTHO05D000304 1.1e-07 60.8 149 36.2
DCAR_022119 Daucus carota HOM05D000399 ORTHO05D000304 1.1e-07 60.8 166 29.5
PSO063G6887 Papaver somniferum HOM05D000399 ORTHO05D000304 1.1e-07 60.8 166 29.5
PSO782G4866 Papaver somniferum HOM05D000399 ORTHO05D000304 1.1e-07 60.8 166 29.5
Phvul.009G260000 Phaseolus vulgaris HOM05D000399 ORTHO05D000304 1.1e-07 60.8 152 29.6
Glyma.03G262100 Glycine max HOM05D000399 ORTHO05D000304 1.5e-07 60.5 152 29.6
Gohir.D11G160900 Gossypium hirsutum HOM05D000399 ORTHO05D000304 1.5e-07 60.5 155 32.9
QL08p047933 Quercus lobata HOM05D000399 ORTHO05D000304 1.5e-07 60.5 153 28.1
Sabra02G0173300 Salix brachista HOM05D000399 ORTHO05D000304 1.5e-07 60.5 155 31.6
VMungo1309G3012 Vigna mungo HOM05D000399 ORTHO05D000304 1.5e-07 60.5 152 29.6
DCAR_012935 Daucus carota HOM05D000399 ORTHO05D000304 1.9e-07 60.1 149 29.5
Glyma.19G261200 Glycine max HOM05D000399 ORTHO05D000304 1.9e-07 60.1 152 29.6
Medtr3g079860 Medicago truncatula HOM05D000399 ORTHO05D000304 1.9e-07 60.1 151 31.1
Ca_09558_v3 Cicer arietinum L. HOM05D000399 ORTHO05D000304 2.5e-07 59.7 163 29.4
QL08p047944 Quercus lobata HOM05D000399 ORTHO05D000304 2.5e-07 59.7 153 29.4
HPP92_015071 Vanilla planifolia HOM05D000399 ORTHO05D000304 2.5e-07 59.7 166 30.1
Atru.chr5.793 Acer truncatum HOM05D000399 ORTHO05D000304 3.3e-07 59.3 152 29.6
CAN.G834.3 Capsicum annuum HOM05D000399 ORTHO05D000304 3.3e-07 59.3 160 31.2
Medtr7g118350 Medicago truncatula HOM05D000399 ORTHO05D000304 3.3e-07 59.3 165 29.1
MBI04_g19002_MAGBIO Magnolia biondii HOM05D000399 ORTHO05D000304 4.3e-07 58.9 152 28.9
SHI20057 Sapria himalayana HOM05D000399 ORTHO05D000023 4.3e-07 58.9 153 28.8
Migut.I00117 Erythranthe guttata HOM05D000399 ORTHO05D000304 5.7e-07 58.5 152 28.9
Nitab4.5_0000482g0020 Nicotiana tabacum HOM05D000399 ORTHO05D000304 5.7e-07 58.5 152 30.3
Actinidia33032 Actinidia chinensis HOM05D000399 ORTHO05D000304 7.4e-07 58.2 152 28.9
CiPaw.01G086000 Carya illinoinensis HOM05D000399 ORTHO05D000304 7.4e-07 58.2 166 30.1
Lalb_Chr04g0261301 Lupinus albus HOM05D000399 ORTHO05D000304 7.4e-07 58.2 162 29.0
MD09G1111700 Malus domestica HOM05D000399 ORTHO05D000304 7.4e-07 58.2 148 34.5
Manes.05G015200 Manihot esculenta HOM05D000399 ORTHO05D000304 7.4e-07 58.2 166 30.1
Potri.002G181400 Populus trichocarpa HOM05D000399 ORTHO05D000304 7.4e-07 58.2 166 30.1
SMO061G0001 Selaginella moellendorffii HOM05D000399 ORTHO05D000304 7.4e-07 58.2 163 28.2
SMO347G0443 Selaginella moellendorffii HOM05D000399 ORTHO05D000304 7.4e-07 58.2 163 28.2
SEGI_13499 Sequoiadendron giganteum HOM05D008111 ORTHO05D000159 7.4e-07 58.2 34 73.5
Thecc.01G331500 Theobroma cacao HOM05D000399 ORTHO05D000304 7.4e-07 58.2 152 28.3
TPR.G4795 Trifolium pratense HOM05D000399 ORTHO05D000304 7.4e-07 58.2 163 29.4
EL10Ac1g00162 Beta vulgaris HOM05D000399 ORTHO05D000304 9.7e-07 57.8 166 27.1
CSS0024796 Camellia sinensis var. sinensis HOM05D000399 ORTHO05D000304 9.7e-07 57.8 152 28.9
CSS0028882 Camellia sinensis var. sinensis HOM05D000399 ORTHO05D000304 9.7e-07 57.8 152 28.9
Cfa003721 Carpinus fangiana HOM05D000399 ORTHO05D000304 9.7e-07 57.8 166 29.5
Ciclev10018447m.g Citrus clementina HOM05D000399 ORTHO05D000304 9.7e-07 57.8 166 29.5
COL.COLO4_23064 Corchorus olitorius HOM05D000399 ORTHO05D000304 9.7e-07 57.8 152 28.9
Gohir.A07G133700 Gossypium hirsutum HOM05D000399 ORTHO05D000304 9.7e-07 57.8 152 28.9
Gohir.D07G138400 Gossypium hirsutum HOM05D000399 ORTHO05D000304 9.7e-07 57.8 152 28.9
Gorai.007G171400 Gossypium raimondii HOM05D000399 ORTHO05D000304 9.7e-07 57.8 155 32.3
Nitab4.5_0005321g0010 Nicotiana tabacum HOM05D000399 ORTHO05D000304 9.7e-07 57.8 153 28.8
PSO541G5711 Papaver somniferum HOM05D000399 ORTHO05D000304 9.7e-07 57.8 150 32.7
unitig_52.g17494 Utricularia gibba HOM05D000259 ORTHO05D000155 9.7e-07 57.8 169 30.2
arahy.Tifrunner.gnm1.ann1.GMG8MT Arachis hypogaea HOM05D000399 ORTHO05D000304 1.3e-06 57.4 152 28.3
CAN.G465.10 Capsicum annuum HOM05D000399 ORTHO05D000304 1.3e-06 57.4 162 29.0
AUR62022688 Chenopodium quinoa HOM05D000399 ORTHO05D000304 1.3e-06 57.4 166 27.1
MELO3C005930.2 Cucumis melo HOM05D000399 ORTHO05D000304 1.3e-06 57.4 152 28.3
CsaV3_3G007100 Cucumis sativus L. HOM05D000399 ORTHO05D000304 1.3e-06 57.4 152 28.3
Duzib138G0986 Durio zibethinus HOM05D000399 ORTHO05D000304 1.3e-06 57.4 152 28.3
PSO675G4047 Papaver somniferum HOM05D000399 ORTHO05D000304 1.3e-06 57.4 150 32.0
Psat5g112200 Pisum sativum HOM05D000399 ORTHO05D000304 1.3e-06 57.4 156 28.2
QL08p031336 Quercus lobata HOM05D000399 ORTHO05D000304 1.3e-06 57.4 155 31.6
Sabra02G0133200 Salix brachista HOM05D000399 ORTHO05D000304 1.3e-06 57.4 152 29.6
SGA_v2.0_scaffold56G20066 Striga asiatica HOM05D000399 ORTHO05D000304 1.3e-06 57.4 152 29.6
THA.LOC104825908 Tarenaya hassleriana HOM05D000399 ORTHO05D000304 1.3e-06 57.4 152 28.3
ATR0579G118 Amborella trichopoda HOM05D000399 ORTHO05D000304 1.6e-06 57.0 152 27.6
Aqoxy5G04353 Aquilegia oxysepala HOM05D000399 ORTHO05D000304 1.6e-06 57.0 166 28.3
CANSAT64G0834 Cannabis sativa HOM05D000399 ORTHO05D000304 1.6e-06 57.0 150 30.0
AUR62004575 Chenopodium quinoa HOM05D000399 ORTHO05D000304 1.6e-06 57.0 166 27.1
ECA248G1686 Erigeron canadensis HOM05D000399 ORTHO05D000304 1.6e-06 57.0 152 29.6
FAN03G2802 Fragaria x ananassa HOM05D000399 ORTHO05D000304 1.6e-06 57.0 152 29.6
Gorai.001G150400 Gossypium raimondii HOM05D000399 ORTHO05D000304 1.6e-06 57.0 166 29.5
Mapoly0003s0222 Marchantia polymorpha HOM05D000399 ORTHO05D000304 1.6e-06 57.0 152 28.3
Nn1g00464 Nelumbo nucifera HOM05D000399 ORTHO05D000304 1.6e-06 57.0 152 28.3
Os05g0271300 Oryza sativa ssp. japonica HOM05D000399 ORTHO05D000304 1.6e-06 57.0 156 28.8
GSVIVG01030481001 Vitis vinifera HOM05D000399 ORTHO05D000304 1.6e-06 57.0 159 31.4
CDE04G3475 Ceratophyllum demersum HOM05D000399 ORTHO05D000304 2.2e-06 56.6 158 29.1
FvH4_7g17920 Fragaria vesca HOM05D000399 ORTHO05D000304 2.2e-06 56.6 152 29.6
FAN06G1166 Fragaria x ananassa HOM05D000399 ORTHO05D000304 2.2e-06 56.6 152 29.6
FAN10G1284 Fragaria x ananassa HOM05D000399 ORTHO05D000304 2.2e-06 56.6 152 29.6
FAN10G3723 Fragaria x ananassa HOM05D000399 ORTHO05D000304 2.2e-06 56.6 152 29.6
Medtr3g079980 Medicago truncatula HOM05D000399 ORTHO05D000304 2.2e-06 56.6 156 29.5
Peaxi162Scf00921g00026 Petunia axillaris HOM05D000399 ORTHO05D000304 2.2e-06 56.6 160 27.5
CDE02G1170 Ceratophyllum demersum HOM05D000399 ORTHO05D000304 2.8e-06 56.2 149 28.9
Dinv34264 Davidia involucrata HOM05D000399 ORTHO05D000304 2.8e-06 56.2 152 28.3
Duzib133G0710 Durio zibethinus HOM05D000399 ORTHO05D000304 2.8e-06 56.2 152 28.3
Lj1g0014116 Lotus japonicus HOM05D000399 ORTHO05D000304 2.8e-06 56.2 166 28.9
Sed0001444 Sechium edule HOM05D000399 ORTHO05D000304 2.8e-06 56.2 166 28.9
Solyc10g004000.1 Solanum lycopersicum HOM05D000399 ORTHO05D000304 2.8e-06 56.2 162 28.4
Sopen10g001150 Solanum pennellii HOM05D000399 ORTHO05D000304 2.8e-06 56.2 162 28.4
Thecc.01G178900 Theobroma cacao HOM05D000399 ORTHO05D000304 2.8e-06 56.2 149 32.9
Ah.05g178810 Amaranthus hybridus HOM05D000399 ORTHO05D000304 3.7e-06 55.8 172 27.3
Nn1g03433 Nelumbo nucifera HOM05D000399 ORTHO05D000304 3.7e-06 55.8 149 29.5
Nitab4.5_0005359g0020 Nicotiana tabacum HOM05D000399 ORTHO05D000304 3.7e-06 55.8 162 28.4
Psat3g000680 Pisum sativum HOM05D000399 ORTHO05D000304 3.7e-06 55.8 165 28.5
RcHm_v2.0_Chr1g0361361 Rosa chinensis HOM05D000399 ORTHO05D000304 3.7e-06 55.8 152 29.6
Aa31LG1G10400 Aethionema arabicum HOM05D000399 ORTHO05D000304 4.8e-06 55.5 169 28.4
Thhalv10006531m.g Eutrema salsugineum HOM05D000399 ORTHO05D000304 4.8e-06 55.5 152 28.9
Pp3c2_15900 Physcomitrium patens HOM05D000399 ORTHO05D000304 4.8e-06 55.5 152 28.3
Rhsim07G0000100 Rhododendron simsii HOM05D000399 ORTHO05D000304 4.8e-06 55.5 152 28.3
PGSC0003DMG400011259 Solanum tuberosum HOM05D000399 ORTHO05D000304 4.8e-06 55.5 162 28.4
PGSC0003DMG400014598 Solanum tuberosum HOM05D000138 ORTHO05D000304 4.8e-06 55.5 152 30.3
Eucgr.D02653 Eucalyptus grandis HOM05D000399 ORTHO05D000304 6.3e-06 55.1 152 27.0
Zm00001eb001570 Zea mays HOM05D000399 ORTHO05D000304 6.3e-06 55.1 152 27.6
Lsat_1_v5_gn_3_140760 Lactuca sativa HOM05D000399 ORTHO05D000304 8.2e-06 54.7 152 28.9
Prupe.2G200900 Prunus persica HOM05D000399 ORTHO05D000304 8.2e-06 54.7 166 29.5
Hund17342 Selenicereus undatus HOM05D000399 ORTHO05D000304 8.2e-06 54.7 152 26.3
Sc23g0001660 Simmondsia chinensis HOM05D000399 ORTHO05D000304 8.2e-06 54.7 152 27.0


User provided reference genes

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