Gene: AUR62022688

General Information

Structural Information

  • Species Chenopodium quinoa
  • Gene Identifier AUR62022688
  • Transcript Identifier AUR62022688-RA
  • Gene Type Coding gene
  • Location C_Quinoa_Scaffold_1870 : 1852391-1862116 : negative

Gene Family Information

  • ID HOM05D000399
  • #Genes/#Species 1254/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id AUR62022688.v1.0
  • pacid 36312037
  • uniprot A0A803M389

Descriptions

  • Description DCL1: Endoribonuclease Dicer homolog 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031053
ISO
PLAZA Integrative Orthologyprimary miRNA processing AT1G01040
GO:0010267
ISO
PLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interference AT1G01040
GO:0035279
ISO
PLAZA Integrative OrthologymRNA cleavage involved in gene silencing by miRNA AT1G01040
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT1G01040
GO:2000034
ISO
PLAZA Integrative Orthologyregulation of seed maturation AT1G01040
GO:0010599
ISO
PLAZA Integrative Orthologyproduction of lsiRNA involved in RNA interference AT1G01040
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT1G01040
GO:0009616
ISO
PLAZA Integrative OrthologyRNAi-mediated antiviral immune response AT1G01040
GO:0048317
ISO
PLAZA Integrative Orthologyseed morphogenesis AT1G01040
GO:0000911
ISO
PLAZA Integrative Orthologycytokinesis by cell plate formation AT1G01040
GO:0009880
ISO
PLAZA Integrative Orthologyembryonic pattern specification AT1G01040
GO:0035196
ISO
PLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNA AT1G01040
GO:0007275
ISO
PLAZA Integrative Orthologymulticellular organism development Os03g0121800
GO:0010098
ISO
PLAZA Integrative Orthologysuspensor development AT1G01040
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0090501
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003725
ISO
PLAZA Integrative Orthologydouble-stranded RNA binding AT1G01040
GO:0004525
IEA
GOA Databaseribonuclease III activity
GO:0004525
IEA
InterProribonuclease III activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016787
IEA
InterProhydrolase activity
GO:0016891
IEA
GOA Databaseendoribonuclease activity, producing 5'-phosphomonoesters
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010445
ISO
PLAZA Integrative Orthologynuclear dicing body AT1G01040
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G01040

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR000999 Ribonuclease III domain
IPR036085 PAZ domain superfamily
IPR036389 Ribonuclease III, endonuclease domain superfamily
IPR003100 PAZ domain
IPR014720 Double-stranded RNA-binding domain
IPR006935 Helicase/UvrB, N-terminal
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR038248 Dicer dimerisation domain superfamily
Mapman id Description
16.9.2.1.1 RNA processing.mRNA silencing.miRNA pathway.DCL1-HYL1 miRNA biogenesis complex.endoribonuclease component DCL1