Gene: Duzib138G0986

General Information

Structural Information

  • Species Durio zibethinus
  • Gene Identifier Duzib138G0986
  • Transcript Identifier Duzib138G0986.01
  • Gene Type Coding gene
  • Location NW_019167893.1 : 3750238-3761105 : negative

Gene Family Information

  • ID HOM05D000399
  • #Genes/#Species 1254/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name LOC111304888
  • name XM_022901909.1
  • pid XP_022757644.1
  • id gene-LOC111304888
  • uniprot A0A6P5ZY36

Descriptions

  • product endoribonuclease Dicer homolog 1-like
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009616
ISO
PLAZA Integrative OrthologyRNAi-mediated antiviral immune response AT1G01040
GO:0010098
ISO
PLAZA Integrative Orthologysuspensor development AT1G01040
GO:0031053
ISO
PLAZA Integrative Orthologyprimary miRNA processing AT1G01040
GO:0007275
ISO
PLAZA Integrative Orthologymulticellular organism development Os03g0121800
GO:0035196
ISO
PLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNA AT1G01040
GO:0009880
ISO
PLAZA Integrative Orthologyembryonic pattern specification AT1G01040
GO:0000911
ISO
PLAZA Integrative Orthologycytokinesis by cell plate formation AT1G01040
GO:0048317
ISO
PLAZA Integrative Orthologyseed morphogenesis AT1G01040
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT1G01040
GO:0010599
ISO
PLAZA Integrative Orthologyproduction of lsiRNA involved in RNA interference AT1G01040
GO:2000034
ISO
PLAZA Integrative Orthologyregulation of seed maturation AT1G01040
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT1G01040
GO:0035279
ISO
PLAZA Integrative OrthologymRNA cleavage involved in gene silencing by miRNA AT1G01040
GO:0010267
ISO
PLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interference AT1G01040
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0090501
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0031047
IEA
GOA Databasegene silencing by RNA

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003725
ISO
PLAZA Integrative Orthologydouble-stranded RNA binding AT1G01040
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005515
IEA
InterProprotein binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0004525
IEA
GOA Databaseribonuclease III activity
GO:0004525
IEA
InterProribonuclease III activity
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004386
IEA
GOA Databasehelicase activity
GO:0016891
IEA
GOA Databaseendoribonuclease activity, producing 5'-phosphomonoesters

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G01040
GO:0010445
ISO
PLAZA Integrative Orthologynuclear dicing body AT1G01040

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000999 Ribonuclease III domain
IPR014720 Double-stranded RNA-binding domain
IPR003100 PAZ domain
IPR036389 Ribonuclease III, endonuclease domain superfamily
IPR036085 PAZ domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR011545 DEAD/DEAH box helicase domain
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR038248 Dicer dimerisation domain superfamily
Mapman id Description
16.9.2.1.1 RNA processing.mRNA silencing.miRNA pathway.DCL1-HYL1 miRNA biogenesis complex.endoribonuclease component DCL1