Gene: Zm00001eb001570

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb001570
  • Transcript Identifier Zm00001eb001570_T001
  • Gene Type Coding gene
  • Location 1 : 4678809-4689408 : negative

Gene Family Information

  • ID HOM05D000399
  • #Genes/#Species 1254/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb001570_T001
  • pid Zm00001eb001570_P001
  • uniprot A0A0K1H3C4
  • uniprot A0A1D6JM08
  • uniprot A0A1D6JLT9
  • uniprot A0A317YG44
  • uniprot A0A1D6JM11
  • uniprot A0A1D6JLX6
  • uniprot A0A1D6JLY7
  • uniprot A0A1D6JLW4
  • uniprot A0A1D6JLX5
  • uniprot A0A1D6JLV6
  • uniprot A0A1D6JLX8
  • uniprot A0A1D6JLY9
  • uniprot A0A1D6JLZ9
  • uniprot A0A1D6JLY2
  • uniprot A0A1D6JLZ2
  • uniprot A0A1D6JLZ1
  • V4_identifier Zm00001d027412

Descriptions

  • Description Zm00001e000158
  • Description Dicer-like protein 1
  • Description dicer-like 101
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035196
IEA
GOA Databaseproduction of miRNAs involved in gene silencing by miRNA
GO:0035279
IEA
GOA DatabasemRNA cleavage involved in gene silencing by miRNA
GO:0048317
IEA
GOA Databaseseed morphogenesis
GO:0009616
IEA
GOA DatabaseRNAi-mediated antiviral immune response
GO:0009880
IEA
GOA Databaseembryonic pattern specification
GO:0010228
IEA
GOA Databasevegetative to reproductive phase transition of meristem
GO:0010267
IEA
GOA Databaseproduction of ta-siRNAs involved in RNA interference
GO:0010599
IEA
GOA Databaseproduction of lsiRNA involved in RNA interference
GO:2000034
IEA
GOA Databaseregulation of seed maturation
GO:0000911
IEA
GOA Databasecytokinesis by cell plate formation
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0010098
ISO
PLAZA Integrative Orthologysuspensor development AT1G01040
GO:0031053
ISO
PLAZA Integrative Orthologyprimary miRNA processing AT1G01040
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT1G01040
GO:0007275
ISO
PLAZA Integrative Orthologymulticellular organism development Os03g0121800
GO:0090501
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0031047
IEA
GOA Databasegene silencing by RNA
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0016075
IEA
GOA DatabaserRNA catabolic process
GO:0030422
IBA
GOA Databaseproduction of siRNA involved in RNA interference

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003725
IEA
GOA Databasedouble-stranded RNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004525
IBA
IEA
GOA Databaseribonuclease III activity
GO:0004525
IEA
InterProribonuclease III activity
GO:0005515
IEA
InterProprotein binding
GO:0003723
IBA
IEA
GOA DatabaseRNA binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004386
IEA
GOA Databasehelicase activity
GO:0016891
IEA
GOA Databaseendoribonuclease activity, producing 5'-phosphomonoesters

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0010445
IEA
GOA Databasenuclear dicing body
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011545 DEAD/DEAH box helicase domain
IPR001650 Helicase, C-terminal
IPR000999 Ribonuclease III domain
IPR014720 Double-stranded RNA-binding domain
IPR036085 PAZ domain superfamily
IPR003100 PAZ domain
IPR036389 Ribonuclease III, endonuclease domain superfamily
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR038248 Dicer dimerisation domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
16.9.2.1.1 RNA processing.mRNA silencing.miRNA pathway.DCL1-HYL1 miRNA biogenesis complex.endoribonuclease component DCL1