Gene: Zm00001eb001570
General Information
Structural Information
- Species Zea mays
- Gene Identifier Zm00001eb001570
- Transcript Identifier Zm00001eb001570_T001
- Gene Type Coding gene
- Location 1 : 4678809-4689408 : negative
Gene Family Information
- ID HOM05D000399
- #Genes/#Species 1254/98
- Phylogenetic origin
- ID ORTHO05D000304
- #Genes/#Species 1156/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Zm00001eb001570_T001
- pid Zm00001eb001570_P001
- uniprot A0A0K1H3C4
- uniprot A0A1D6JM08
- uniprot A0A1D6JLT9
- uniprot A0A317YG44
- uniprot A0A1D6JM11
- uniprot A0A1D6JLX6
- uniprot A0A1D6JLY7
- uniprot A0A1D6JLW4
- uniprot A0A1D6JLX5
- uniprot A0A1D6JLV6
- uniprot A0A1D6JLX8
- uniprot A0A1D6JLY9
- uniprot A0A1D6JLZ9
- uniprot A0A1D6JLY2
- uniprot A0A1D6JLZ2
- uniprot A0A1D6JLZ1
- V4_identifier Zm00001d027412
Descriptions
- Description Zm00001e000158
- Description Dicer-like protein 1
- Description dicer-like 101
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0035196 | IEA | GOA Database | production of miRNAs involved in gene silencing by miRNA | |
GO:0035279 | IEA | GOA Database | mRNA cleavage involved in gene silencing by miRNA | |
GO:0048317 | IEA | GOA Database | seed morphogenesis | |
GO:0009616 | IEA | GOA Database | RNAi-mediated antiviral immune response | |
GO:0009880 | IEA | GOA Database | embryonic pattern specification | |
GO:0010228 | IEA | GOA Database | vegetative to reproductive phase transition of meristem | |
GO:0010267 | IEA | GOA Database | production of ta-siRNAs involved in RNA interference | |
GO:0010599 | IEA | GOA Database | production of lsiRNA involved in RNA interference | |
GO:2000034 | IEA | GOA Database | regulation of seed maturation | |
GO:0000911 | IEA | GOA Database | cytokinesis by cell plate formation | |
GO:0006396 | IEA | GOA Database | RNA processing | |
GO:0006396 | IEA | InterPro | RNA processing | |
GO:0010098 | ISO | PLAZA Integrative Orthology | suspensor development | AT1G01040 |
GO:0031053 | ISO | PLAZA Integrative Orthology | primary miRNA processing | AT1G01040 |
GO:0009908 | ISO | PLAZA Integrative Orthology | flower development | AT1G01040 |
GO:0007275 | ISO | PLAZA Integrative Orthology | multicellular organism development | Os03g0121800 |
GO:0090501 | IEA | GOA Database | RNA phosphodiester bond hydrolysis | |
GO:0090502 | IEA | GOA Database | RNA phosphodiester bond hydrolysis, endonucleolytic | |
GO:0031047 | IEA | GOA Database | gene silencing by RNA | |
GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis | |
GO:0016075 | IEA | GOA Database | rRNA catabolic process | |
GO:0030422 | IBA | GOA Database | production of siRNA involved in RNA interference |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003725 | IEA | GOA Database | double-stranded RNA binding | |
GO:0003676 | IEA | GOA Database | nucleic acid binding | |
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0005524 | IEA | GOA Database | ATP binding | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0004525 | IBA IEA | GOA Database | ribonuclease III activity | |
GO:0004525 | IEA | InterPro | ribonuclease III activity | |
GO:0005515 | IEA | InterPro | protein binding | |
GO:0003723 | IBA IEA | GOA Database | RNA binding | |
GO:0000166 | IEA | GOA Database | nucleotide binding | |
GO:0016787 | IEA | GOA Database | hydrolase activity | |
GO:0004519 | IEA | GOA Database | endonuclease activity | |
GO:0004518 | IEA | GOA Database | nuclease activity | |
GO:0004386 | IEA | GOA Database | helicase activity | |
GO:0016891 | IEA | GOA Database | endoribonuclease activity, producing 5'-phosphomonoesters |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IBA IEA | GOA Database | nucleus | |
GO:0010445 | IEA | GOA Database | nuclear dicing body | |
GO:0005737 | IBA | GOA Database | cytoplasm |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR011545 | DEAD/DEAH box helicase domain |
IPR001650 | Helicase, C-terminal |
IPR000999 | Ribonuclease III domain |
IPR014720 | Double-stranded RNA-binding domain |
IPR036085 | PAZ domain superfamily |
IPR003100 | PAZ domain |
IPR036389 | Ribonuclease III, endonuclease domain superfamily |
IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
IPR038248 | Dicer dimerisation domain superfamily |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Mapman id | Description |
---|---|
16.9.2.1.1 | RNA processing.mRNA silencing.miRNA pathway.DCL1-HYL1 miRNA biogenesis complex.endoribonuclease component DCL1 |