Gene: Duzib133G0710

General Information

Structural Information

  • Species Durio zibethinus
  • Gene Identifier Duzib133G0710
  • Transcript Identifier Duzib133G0710.01
  • Gene Type Coding gene
  • Location NW_019167938.1 : 3299415-3310510 : negative

Gene Family Information

  • ID HOM05D000399
  • #Genes/#Species 1254/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name LOC111313985
  • name XM_022914912.1
  • pid XP_022770647.1
  • id gene-LOC111313985
  • uniprot A0A6P6B0L3

Descriptions

  • product endoribonuclease Dicer homolog 1-like, transcript variant X3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0031047
IEA
GOA Databasegene silencing by RNA
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0090501
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016787
IEA
InterProhydrolase activity
GO:0016891
IEA
GOA Databaseendoribonuclease activity, producing 5'-phosphomonoesters
GO:0004525
IEA
GOA Databaseribonuclease III activity
GO:0004525
IEA
InterProribonuclease III activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0005515
IEA
InterProprotein binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000999 Ribonuclease III domain
IPR001650 Helicase, C-terminal
IPR036389 Ribonuclease III, endonuclease domain superfamily
IPR003100 PAZ domain
IPR006935 Helicase/UvrB, N-terminal
IPR036085 PAZ domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014720 Double-stranded RNA-binding domain
IPR038248 Dicer dimerisation domain superfamily
IPR014001 Helicase superfamily 1/2, ATP-binding domain
Mapman id Description
16.9.2.1.1 RNA processing.mRNA silencing.miRNA pathway.DCL1-HYL1 miRNA biogenesis complex.endoribonuclease component DCL1