Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G021900 Prunus persica HOM05D001257 ORTHO05D009836 3.6e-141 505.0 270 100.0
MD02G1302300 Malus domestica HOM05D001257 ORTHO05D009836 2.5e-81 306.2 236 75.4
MD07G1021800 Malus domestica HOM05D001257 ORTHO05D009836 5.0e-74 282.0 234 70.1
FAN03G2091 Fragaria x ananassa HOM05D001257 ORTHO05D009836 3.1e-68 262.7 237 68.8
FAN10G1834 Fragaria x ananassa HOM05D001257 ORTHO05D009836 2.2e-66 256.5 235 68.1
FAN06G0887 Fragaria x ananassa HOM05D001257 ORTHO05D009836 3.2e-65 252.7 235 67.2
FvH4_7g01630 Fragaria vesca HOM05D001257 ORTHO05D009836 4.2e-65 252.3 235 67.2
QL04p009795 Quercus lobata HOM05D001257 ORTHO05D009836 1.4e-55 220.7 239 61.1
Haze_03132 Corylus avellana HOM05D001257 ORTHO05D009836 5.7e-54 215.3 234 59.8
Haze_03135 Corylus avellana HOM05D001257 ORTHO05D009836 5.7e-54 215.3 234 59.8
RcHm_v2.0_Chr1g0317901 Rosa chinensis HOM05D001257 ORTHO05D009836 1.3e-53 214.2 236 61.4
Cfa022634 Carpinus fangiana HOM05D001257 ORTHO05D009836 1.8e-52 210.3 234 59.0
CiPaw.14G002600 Carya illinoinensis HOM05D001257 ORTHO05D009836 2.8e-45 186.4 240 54.6
ClCG10G012190 Citrullus lanatus HOM05D001257 ORTHO05D009836 7.2e-41 171.8 240 46.7
CANSAT80G1942 Cannabis sativa HOM05D001257 ORTHO05D009836 9.5e-41 171.4 232 51.3
CsaV3_3G031970 Cucumis sativus L. HOM05D001257 ORTHO05D009836 5.2e-39 165.6 240 46.2
MELO3C023996.2 Cucumis melo HOM05D001257 ORTHO05D009836 7.5e-38 161.8 240 46.2
Hma1.2p1_0685F.1_g203110 Hydrangea macrophylla HOM05D001257 ORTHO05D009836 9.8e-38 161.4 243 49.4
Dinv09312 Davidia involucrata HOM05D001257 ORTHO05D009836 5.4e-36 155.6 234 45.3
Atru.chr11.2579 Acer truncatum HOM05D001257 ORTHO05D009836 4.6e-35 152.5 261 48.7
TWI09G1371 Tripterygium wilfordii HOM05D001257 ORTHO05D009836 7.8e-35 151.8 256 46.9
Ciclev10033747m.g Citrus clementina HOM05D001257 ORTHO05D009836 2.5e-33 146.7 262 43.9
Lalb_Chr04g0263881 Lupinus albus HOM05D001257 ORTHO05D009836 6.2e-32 142.1 243 46.9
Manes.10G136500 Manihot esculenta HOM05D001257 ORTHO05D009836 8.9e-31 138.3 238 42.9
Potri.009G057200 Populus trichocarpa HOM05D001257 ORTHO05D009836 2.6e-30 136.7 242 48.3
Sed0005853 Sechium edule HOM05D001257 ORTHO05D009836 1.3e-29 134.4 241 41.5
Sabra09G0041900 Salix brachista HOM05D001257 ORTHO05D009836 2.9e-29 133.3 243 46.1
Nn2g15224 Nelumbo nucifera HOM05D001257 ORTHO05D009836 9.2e-28 128.3 254 43.3
GSVIVG01032193001 Vitis vinifera HOM05D001257 ORTHO05D009836 4.3e-25 119.4 101 62.4
Ca_14519_v3 Cicer arietinum L. HOM05D001257 ORTHO05D009836 3.6e-24 116.3 220 44.1
Medtr3g033420 Medicago truncatula HOM05D001257 ORTHO05D009836 4.7e-24 115.9 221 43.9
Lj3g0009899 Lotus japonicus HOM05D001257 ORTHO05D009836 6.2e-24 115.5 237 39.7
Cc02_g28510 Coffea canephora HOM05D001257 ORTHO05D009836 2.0e-22 110.5 249 41.8
Aqoxy2G00150 Aquilegia oxysepala HOM05D001257 ORTHO05D009836 1.7e-21 107.5 234 39.3
Cpa.g.sc125.39 Carica papaya HOM05D001257 ORTHO05D009836 7.1e-20 102.1 246 38.6
PSO210G4218 Papaver somniferum HOM05D001257 ORTHO05D009836 7.1e-20 102.1 265 34.0
DCAR_022376 Daucus carota HOM05D001257 ORTHO05D009836 2.1e-19 100.5 141 41.8
TPR.G14564 Trifolium pratense HOM05D001257 ORTHO05D009836 2.1e-19 100.5 222 41.4
Psat5g211280 Pisum sativum HOM05D001257 ORTHO05D009836 2.7e-19 100.1 233 38.2
Lj9A640G57 Lonicera japonica HOM05D001257 ORTHO05D009836 1.0e-18 98.2 245 35.5
CDE09G1260 Ceratophyllum demersum HOM05D001257 ORTHO05D009836 1.3e-18 97.8 101 49.5
PSO832G2593 Papaver somniferum HOM05D001257 ORTHO05D009836 3.9e-18 96.3 273 32.6
ATR0626G230 Amborella trichopoda HOM05D001257 ORTHO05D009836 5.1e-18 95.9 251 38.6
Solyc01g087690.3 Solanum lycopersicum HOM05D001257 ORTHO05D009836 6.6e-18 95.5 103 55.3
Sopen01g034650 Solanum pennellii HOM05D001257 ORTHO05D009836 6.6e-18 95.5 103 55.3
THA.LOC104826688 Tarenaya hassleriana HOM05D001257 ORTHO05D009836 6.6e-18 95.5 237 38.4
QL04p034691 Quercus lobata HOM05D001257 ORTHO05D009836 3.3e-17 93.2 69 71.0
CDE08G1166 Ceratophyllum demersum HOM05D001257 ORTHO05D009836 3.6e-16 89.7 233 35.2
Nitab4.5_0004053g0100 Nicotiana tabacum HOM05D001257 ORTHO05D009836 3.6e-16 89.7 247 38.1
Nitab4.5_0000707g0050 Nicotiana tabacum HOM05D001257 ORTHO05D009836 4.7e-16 89.4 239 37.2
Aa31LG1G19830 Aethionema arabicum HOM05D001257 ORTHO05D009836 6.2e-16 89.0 232 36.2
CAN.G219.72 Capsicum annuum HOM05D001257 ORTHO05D009836 1.4e-15 87.8 191 43.5
Carub.0006s1191 Capsella rubella HOM05D001257 ORTHO05D009836 1.8e-15 87.4 126 45.2
CARHR199720 Cardamine hirsuta HOM05D001257 ORTHO05D009836 4.0e-15 86.3 98 51.0
unitig_22.g5434 Utricularia gibba HOM05D001257 ORTHO05D009836 5.2e-15 85.9 131 45.0
BcaC04g24259 Brassica carinata HOM05D001257 ORTHO05D009836 8.9e-15 85.1 240 37.5
Peaxi162Scf00694g00316 Petunia axillaris HOM05D001257 ORTHO05D009836 1.2e-14 84.7 247 36.4
AT5G13730 Arabidopsis thaliana HOM05D001257 ORTHO05D009836 4.4e-14 82.8 238 36.1
Sp6g30290 Schrenkiella parvula HOM05D001257 ORTHO05D009836 4.4e-14 82.8 244 37.3
A10p24590 Brassica napus HOM05D001257 ORTHO05D009836 2.2e-13 80.5 241 35.7
BolC9t59184H Brassica oleracea HOM05D001257 ORTHO05D009836 2.2e-13 80.5 234 37.6
BraA10t44522Z Brassica rapa HOM05D001257 ORTHO05D009836 2.2e-13 80.5 241 35.7
PGSC0003DMG402006783 Solanum tuberosum HOM05D001257 ORTHO05D009836 2.9e-13 80.1 77 58.4
SalBow5G4767 Salvia bowleyana HOM05D001257 ORTHO05D009836 3.7e-13 79.7 92 51.1
Thhalv10013654m.g Eutrema salsugineum HOM05D001257 ORTHO05D009836 4.9e-13 79.3 241 35.3
C09p63370 Brassica napus HOM05D001257 ORTHO05D009836 6.4e-13 79.0 243 37.0
BcaC04g19084 Brassica carinata HOM05D001257 ORTHO05D009836 1.4e-12 77.8 234 36.8
Migut.B01271 Erythranthe guttata HOM05D001257 ORTHO05D009836 2.4e-12 77.0 94 44.7
BcaNung04189 Brassica carinata HOM05D001257 ORTHO05D009836 4.1e-12 76.3 236 35.6
C02p06400 Brassica napus HOM05D001257 ORTHO05D009836 4.1e-12 76.3 236 35.6
BolC2t06583H Brassica oleracea HOM05D001257 ORTHO05D009836 4.1e-12 76.3 236 35.6
A02p02140 Brassica napus HOM05D001257 ORTHO05D009836 2.7e-11 73.6 233 33.9
BraA02t05184Z Brassica rapa HOM05D001535 ORTHO05D004010 2.7e-11 73.6 233 33.9
VMungo1080G0085 Vigna mungo HOM05D001257 ORTHO05D009836 4.6e-11 72.8 108 40.7
Phvul.005G023100 Phaseolus vulgaris HOM05D001257 ORTHO05D009836 6.6e-10 68.9 230 29.6
MBI19_g45283_MAGBIO Magnolia biondii HOM05D001257 ORTHO05D009836 1.1e-09 68.2 107 40.2
TAR623G0345 Trochodendron aralioides HOM05D001257 ORTHO05D009836 2.5e-09 67.0 47 72.3
Nn2g13757 Nelumbo nucifera HOM05D001257 ORTHO05D007181 9.6e-09 65.1 106 39.6
VMungo0647G0947 Vigna mungo HOM05D001257 ORTHO05D009836 9.6e-09 65.1 102 36.3
PSO063G3959 Papaver somniferum HOM05D001257 ORTHO05D007181 8.1e-08 62.0 106 38.7
PSO339G6674 Papaver somniferum HOM05D001257 ORTHO05D007181 8.1e-08 62.0 106 38.7
AagrBONN_evm.TU.Sc2ySwM_344.773 Anthoceros agrestis HOM05D001257 ORTHO05D005285 1.1e-07 61.6 91 36.3
RcHm_v2.0_Chr3g0494351 Rosa chinensis HOM05D001257 ORTHO05D005285 4.0e-07 59.7 128 32.8
PGSC0003DMG400021553 Solanum tuberosum HOM05D001257 ORTHO05D007181 4.0e-07 59.7 106 33.0
Cpa.g.sc56.16 Carica papaya HOM05D001257 ORTHO05D007181 6.8e-07 58.9 91 35.2
Sed0017080 Sechium edule HOM05D001257 ORTHO05D007181 6.8e-07 58.9 91 36.3
GSVIVG01025717001 Vitis vinifera HOM05D001257 ORTHO05D007181 1.2e-06 58.2 91 35.2
THA.LOC104806486 Tarenaya hassleriana HOM05D001257 ORTHO05D007181 2.0e-06 57.4 106 33.0
AL4G33240 Arabidopsis lyrata HOM05D001257 ORTHO05D007181 2.6e-06 57.0 124 32.3
C09p62630 Brassica napus HOM05D001257 ORTHO05D009836 2.6e-06 57.0 240 32.9
Thhalv10016472m.g Eutrema salsugineum HOM05D001257 ORTHO05D007181 2.6e-06 57.0 124 32.3
Sp1g07200 Schrenkiella parvula HOM05D001257 ORTHO05D005285 2.6e-06 57.0 91 34.1
Solyc09g008040.3 Solanum lycopersicum HOM05D001257 ORTHO05D007181 2.6e-06 57.0 154 28.6
Sopen09g002840 Solanum pennellii HOM05D001257 ORTHO05D007181 2.6e-06 57.0 154 28.6
BcaB07g34097 Brassica carinata HOM05D001257 ORTHO05D005285 3.4e-06 56.6 91 33.0
C05p06640 Brassica napus HOM05D001257 ORTHO05D005285 3.4e-06 56.6 91 33.0
BolC5t29424H Brassica oleracea HOM05D001257 ORTHO05D005285 3.4e-06 56.6 91 33.0
BraA06t23761Z Brassica rapa HOM05D001257 ORTHO05D005285 3.4e-06 56.6 91 33.0
CARHR131470 Cardamine hirsuta HOM05D001257 ORTHO05D007181 3.4e-06 56.6 124 32.3
Nitab4.5_0003123g0050 Nicotiana tabacum HOM05D001257 ORTHO05D005285 3.4e-06 56.6 116 34.5
Sp4g19270 Schrenkiella parvula HOM05D001257 ORTHO05D007181 3.4e-06 56.6 124 32.3
Carub.0004s1884 Capsella rubella HOM05D001257 ORTHO05D007181 4.4e-06 56.2 124 32.3
Thhalv10007187m.g Eutrema salsugineum HOM05D001257 ORTHO05D005285 4.4e-06 56.2 91 34.1
RcHm_v2.0_Chr3g0470031 Rosa chinensis HOM05D001257 ORTHO05D007181 4.4e-06 56.2 235 25.5
ATR0680G106 Amborella trichopoda HOM05D001257 ORTHO05D007181 5.8e-06 55.8 99 35.4
BraA08t35418Z Brassica rapa HOM05D001257 ORTHO05D005285 5.8e-06 55.8 91 33.0
Glyma.13G144000 Glycine max HOM05D001257 ORTHO05D007181 5.8e-06 55.8 115 32.2
Gohir.D04G111200 Gossypium hirsutum HOM05D001257 ORTHO05D007181 5.8e-06 55.8 106 33.0
Gorai.009G415400 Gossypium raimondii HOM05D001257 ORTHO05D007181 5.8e-06 55.8 106 33.0
Nitab4.5_0000101g0380 Nicotiana tabacum HOM05D001257 ORTHO05D007181 5.8e-06 55.8 91 33.0
Nitab4.5_0002963g0040 Nicotiana tabacum HOM05D001257 ORTHO05D007181 5.8e-06 55.8 91 33.0
SEGI_00405 Sequoiadendron giganteum HOM05D001257 ORTHO05D005285 5.8e-06 55.8 95 31.6
THA.LOC104805804 Tarenaya hassleriana HOM05D001257 ORTHO05D005285 5.8e-06 55.8 91 34.1
Aa31LG5G22230 Aethionema arabicum HOM05D001257 ORTHO05D007181 7.6e-06 55.5 124 30.6
ATR0691G203 Amborella trichopoda HOM05D001257 ORTHO05D005285 7.6e-06 55.5 95 30.5
BcaB03g13326 Brassica carinata HOM05D001257 ORTHO05D005285 7.6e-06 55.5 91 33.0
BcaC04g19024 Brassica carinata HOM05D001257 ORTHO05D009836 7.6e-06 55.5 226 34.5
BcaC07g38400 Brassica carinata HOM05D001257 ORTHO05D005285 7.6e-06 55.5 91 33.0
A08p35090 Brassica napus HOM05D001257 ORTHO05D005285 7.6e-06 55.5 91 33.0
C08p11560 Brassica napus HOM05D001257 ORTHO05D005285 7.6e-06 55.5 91 33.0
BolC8t48835H Brassica oleracea HOM05D001257 ORTHO05D005285 7.6e-06 55.5 91 33.0
BolC9t59100H Brassica oleracea HOM05D001257 ORTHO05D009836 7.6e-06 55.5 226 34.5
AUR62038029 Chenopodium quinoa HOM05D001257 ORTHO05D005285 7.6e-06 55.5 91 36.3
Eucgr.K01255 Eucalyptus grandis HOM05D001257 ORTHO05D007181 7.6e-06 55.5 106 34.0
Lalb_Chr06g0171671 Lupinus albus HOM05D001257 ORTHO05D007181 7.6e-06 55.5 106 35.8
AT2G36990 Arabidopsis thaliana HOM05D001257 ORTHO05D007181 9.9e-06 55.1 106 34.0
BcaC02g07561 Brassica carinata HOM05D001257 ORTHO05D007181 9.9e-06 55.1 106 33.0
BolC4t28055H Brassica oleracea HOM05D001257 ORTHO05D007181 9.9e-06 55.1 106 33.0
Glyma.10G057300 Glycine max HOM05D001257 ORTHO05D007181 9.9e-06 55.1 128 30.5
Gohir.A04G072600 Gossypium hirsutum HOM05D001257 ORTHO05D007181 9.9e-06 55.1 106 32.1
Mapoly0214s0004 Marchantia polymorpha HOM05D001257 ORTHO05D005285 9.9e-06 55.1 104 33.7
TAR623G0298 Trochodendron aralioides HOM05D001257 ORTHO05D007181 9.9e-06 55.1 106 36.8


User provided reference genes

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