Gene: CiPaw.14G002600

General Information

Structural Information

  • Species Carya illinoinensis
  • Gene Identifier CiPaw.14G002600
  • Transcript Identifier CiPaw.14G002600.1
  • Gene Type Coding gene
  • Location Chr14 : 238339-241554 : negative

Gene Family Information

  • ID HOM05D001257
  • #Genes/#Species 497/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id CiPaw.14G002600.v1.1
  • pacid 45805934
  • locus Caril.14G004800

Descriptions

  • Description PTHR30603:SF24 - RNA POLYMERASE SIGMA FACTOR SIGD, CHLOROPLASTIC
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0071482
ISO
PLAZA Integrative Orthologycellular response to light stimulus AT5G13730
GO:2001141
ISO
PLAZA Integrative Orthologyregulation of RNA biosynthetic process AT5G13730

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0016987
ISO
PLAZA Integrative Orthologysigma factor activity AT5G13730

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007627 RNA polymerase sigma-70 region 2
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR007624 RNA polymerase sigma-70 region 3
IPR013325 RNA polymerase sigma factor, region 2
IPR013324 RNA polymerase sigma factor, region 3/4-like
IPR000943 RNA polymerase sigma-70
IPR007630 RNA polymerase sigma-70 region 4
IPR014284 RNA polymerase sigma-70 like domain
Mapman id Description
15.6.2.1 RNA biosynthesis.organelle machinery.transcriptional regulation.basal transcription factor (Sigma)