Gene: PSO210G4218

General Information

Structural Information

Species Papaver somniferum
Gene Identifier PSO210G4218
Transcript Identifier PSO210G4218.01
Gene Type Coding gene
Location NC_039359.1 : 197847628-197849811 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001257
#Genes/#Species 497/99
Phylogenetic origin

ID ORTHO05D009836
#Genes/#Species 89/63
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid rna-XM_026594261.1
pid XP_026450046.1
id gene-LOC113350169

Descriptions

Long descriptions
Ortholog descriptions

product RNA polymerase sigma factor sigD, chloroplastic-like

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006352	IEA	InterPro	DNA-templated transcription, initiation
GO:0006355	IEA	InterPro	regulation of transcription, DNA-templated
GO:0071482	ISO	PLAZA Integrative Orthology	cellular response to light stimulus	AT5G13730
GO:2001141	ISO	PLAZA Integrative Orthology	regulation of RNA biosynthetic process	AT5G13730

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003700	IEA	InterPro	DNA-binding transcription factor activity
GO:0016987	ISO	PLAZA Integrative Orthology	sigma factor activity	AT5G13730

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR007624	RNA polymerase sigma-70 region 3
IPR000943	RNA polymerase sigma-70
IPR013325	RNA polymerase sigma factor, region 2
IPR007630	RNA polymerase sigma-70 region 4
IPR013324	RNA polymerase sigma factor, region 3/4-like
IPR007627	RNA polymerase sigma-70 region 2
IPR036388	Winged helix-like DNA-binding domain superfamily
IPR014284	RNA polymerase sigma-70 like domain

Mapman id	Description
15.6.2.1	RNA biosynthesis.organelle machinery.transcriptional regulation.basal transcription factor (Sigma)