Gene: Potri.009G057200

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.009G057200
  • Transcript Identifier Potri.009G057200.3
  • Gene Type Coding gene
  • Location Chr09 : 6020392-6022198 : positive

Gene Family Information

  • ID HOM05D001257
  • #Genes/#Species 497/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.009G057200.v4.1
  • pacid 42771298
  • synonym POPTR_0009s06210

Descriptions

  • Description PTHR30603//PTHR30603:SF24 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGD, CHLOROPLASTIC
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0071482
ISO
PLAZA Integrative Orthologycellular response to light stimulus AT5G13730
GO:2001141
ISO
PLAZA Integrative Orthologyregulation of RNA biosynthetic process AT5G13730

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0016987
ISO
PLAZA Integrative Orthologysigma factor activity AT5G13730

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014284 RNA polymerase sigma-70 like domain
IPR007627 RNA polymerase sigma-70 region 2
IPR013325 RNA polymerase sigma factor, region 2
IPR000943 RNA polymerase sigma-70
Mapman id Description
15.6.2.1 RNA biosynthesis.organelle machinery.transcriptional regulation.basal transcription factor (Sigma)