Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G010100 Prunus persica HOM05D005208 ORTHO05D006415 1.5e-33 145.6 73 100.0
MD02G1314900 Malus domestica HOM05D005208 ORTHO05D006415 2.8e-32 141.4 71 98.6
MD07G1007200 Malus domestica HOM05D005208 ORTHO05D006415 2.8e-32 141.4 71 98.6
RcHm_v2.0_Chr1g0314961 Rosa chinensis HOM05D005208 ORTHO05D006415 2.8e-32 141.4 71 98.6
TAR369G0402 Trochodendron aralioides HOM05D005208 ORTHO05D006415 3.7e-32 141.0 71 97.2
FvH4_7g00800 Fragaria vesca HOM05D005208 ORTHO05D006415 4.8e-32 140.6 71 97.2
FAN03G3338 Fragaria x ananassa HOM05D005208 ORTHO05D006415 4.8e-32 140.6 71 97.2
FAN06G3906 Fragaria x ananassa HOM05D005208 ORTHO05D006415 4.8e-32 140.6 71 97.2
FAN10G1294 Fragaria x ananassa HOM05D005208 ORTHO05D006415 4.8e-32 140.6 71 97.2
DCAR_006299 Daucus carota HOM05D005208 ORTHO05D006415 6.3e-32 140.2 71 97.2
Potri.001G269500 Populus trichocarpa HOM05D005208 ORTHO05D006415 6.3e-32 140.2 71 97.2
Potri.009G064000 Populus trichocarpa HOM05D005208 ORTHO05D006415 6.3e-32 140.2 71 97.2
Sabra09G0047300 Salix brachista HOM05D005208 ORTHO05D006415 6.3e-32 140.2 71 97.2
Gohir.A08G027400 Gossypium hirsutum HOM05D005208 ORTHO05D006415 8.3e-32 139.8 71 97.2
Gohir.D08G038100 Gossypium hirsutum HOM05D005208 ORTHO05D006415 8.3e-32 139.8 71 97.2
Gorai.004G036100 Gossypium raimondii HOM05D005208 ORTHO05D006415 8.3e-32 139.8 71 97.2
Actinidia36719 Actinidia chinensis HOM05D005208 ORTHO05D006415 1.1e-31 139.4 71 97.2
arahy.Tifrunner.gnm1.ann1.SLE1RG Arachis hypogaea HOM05D005208 ORTHO05D006415 1.1e-31 139.4 71 97.2
CSS0039411 Camellia sinensis var. sinensis HOM05D005208 ORTHO05D006415 1.1e-31 139.4 71 97.2
Carub.0005s0302 Capsella rubella HOM05D005208 ORTHO05D006415 1.1e-31 139.4 71 97.2
CiPaw.13G163800 Carya illinoinensis HOM05D005208 ORTHO05D006415 1.1e-31 139.4 71 97.2
Eucgr.K01365 Eucalyptus grandis HOM05D005208 ORTHO05D006415 1.1e-31 139.4 71 97.2
Lalb_Chr12g0205961 Lupinus albus HOM05D005208 ORTHO05D006415 1.1e-31 139.4 71 95.8
PGR119G1849 Punica granatum HOM05D005208 ORTHO05D006415 1.1e-31 139.4 71 97.2
Sed0001189 Sechium edule HOM05D005208 ORTHO05D006415 1.1e-31 139.4 71 95.8
Thecc.01G413400 Theobroma cacao HOM05D005208 ORTHO05D006415 1.1e-31 139.4 71 97.2
TWI14G0133 Tripterygium wilfordii HOM05D005208 ORTHO05D006415 1.1e-31 139.4 71 97.2
arahy.Tifrunner.gnm1.ann1.V9LFMD Arachis hypogaea HOM05D005208 ORTHO05D006415 1.4e-31 139.0 70 98.6
Haze_23082 Corylus avellana HOM05D005208 ORTHO05D006415 1.4e-31 139.0 71 95.8
Dinv43460 Davidia involucrata HOM05D005208 ORTHO05D006415 1.4e-31 139.0 71 95.8
Nn2g15393 Nelumbo nucifera HOM05D005208 ORTHO05D006415 1.4e-31 139.0 71 95.8
Nn7g36187 Nelumbo nucifera HOM05D005208 ORTHO05D006415 1.4e-31 139.0 71 95.8
PSO447G0208 Papaver somniferum HOM05D005208 ORTHO05D006415 1.4e-31 139.0 71 97.2
Atru.chr11.2641 Acer truncatum HOM05D005208 ORTHO05D006415 1.8e-31 138.7 71 95.8
CARHR146260 Cardamine hirsuta HOM05D005208 ORTHO05D006415 1.8e-31 138.7 71 95.8
Ciclev10033061m.g Citrus clementina HOM05D005208 ORTHO05D006415 1.8e-31 138.7 71 95.8
AL5G13680 Arabidopsis lyrata HOM05D005208 ORTHO05D006415 2.4e-31 138.3 71 95.8
AT2G03870 Arabidopsis thaliana HOM05D005208 ORTHO05D006415 2.4e-31 138.3 71 95.8
Manes.10G145800 Manihot esculenta HOM05D005208 ORTHO05D006415 2.4e-31 138.3 71 95.8
Manes.10G146000 Manihot esculenta HOM05D005208 ORTHO05D006415 2.4e-31 138.3 71 95.8
Sp2g14670 Schrenkiella parvula HOM05D005208 ORTHO05D006415 2.4e-31 138.3 71 95.8
CANSAT11G1283 Cannabis sativa HOM05D005208 ORTHO05D006415 3.1e-31 137.9 71 95.8
Phvul.L003846 Phaseolus vulgaris HOM05D005208 ORTHO05D006415 3.1e-31 137.9 71 95.8
Sc09g0000550 Simmondsia chinensis HOM05D005208 ORTHO05D006415 3.1e-31 137.9 71 94.4
VMungo1127G1122 Vigna mungo HOM05D005208 ORTHO05D006415 3.1e-31 137.9 71 95.8
MSTRG.5012 Avicennia marina HOM05D005208 ORTHO05D006415 4.1e-31 137.5 71 94.4
Cc02_g27590 Coffea canephora HOM05D005208 ORTHO05D006415 4.1e-31 137.5 71 94.4
COL.COLO4_23915 Corchorus olitorius HOM05D005208 ORTHO05D006415 4.1e-31 137.5 70 97.1
Duzib268G0815 Durio zibethinus HOM05D005208 ORTHO05D006415 4.1e-31 137.5 71 94.4
FAN01G2640 Fragaria x ananassa HOM05D005208 ORTHO05D006415 4.1e-31 137.5 71 95.8
Glyma.05G149300 Glycine max HOM05D005208 ORTHO05D006415 4.1e-31 137.5 71 95.8
Glyma.08G105900 Glycine max HOM05D005208 ORTHO05D006415 4.1e-31 137.5 71 95.8
Duzib138G0119 Durio zibethinus HOM05D005208 ORTHO05D006415 5.3e-31 137.1 71 94.4
Medtr7g065100 Medicago truncatula HOM05D005208 ORTHO05D006415 5.3e-31 137.1 71 95.8
PSO210G4938 Papaver somniferum HOM05D005208 ORTHO05D006415 5.3e-31 137.1 69 98.6
Psat4g195040 Pisum sativum HOM05D005208 ORTHO05D006415 5.3e-31 137.1 71 95.8
TAR633G0908 Trochodendron aralioides HOM05D005208 ORTHO05D006415 5.3e-31 137.1 70 95.7
AUR62007315 Chenopodium quinoa HOM05D005208 ORTHO05D006415 7.0e-31 136.7 71 94.4
AUR62018690 Chenopodium quinoa HOM05D005208 ORTHO05D006415 7.0e-31 136.7 71 94.4
CsaV3_3G032260 Cucumis sativus L. HOM05D005208 ORTHO05D006415 7.0e-31 136.7 71 95.8
Sc20g0007120 Simmondsia chinensis HOM05D005208 ORTHO05D006415 7.0e-31 136.7 71 95.8
Ah.12g055270 Amaranthus hybridus HOM05D005208 ORTHO05D006415 9.1e-31 136.3 71 94.4
ClCG10G012490 Citrullus lanatus HOM05D005208 ORTHO05D006415 9.1e-31 136.3 71 94.4
Dinv09372 Davidia involucrata HOM05D005208 ORTHO05D006415 9.1e-31 136.3 71 94.4
ECA234G2562 Erigeron canadensis HOM05D005208 ORTHO05D006415 9.1e-31 136.3 71 94.4
MBI11_g24620_MAGBIO Magnolia biondii HOM05D005208 ORTHO05D006415 9.1e-31 136.3 70 95.7
Oeu064261.1 Olea europaea HOM05D005208 ORTHO05D006415 9.1e-31 136.3 71 94.4
HPP92_022787 Vanilla planifolia HOM05D005208 ORTHO05D006415 9.1e-31 136.3 71 93.0
Aqoxy5G03601_Aqoxy5G03602 Aquilegia oxysepala HOM05D005208 ORTHO05D006415 1.6e-30 135.6 70 95.7
ECA234G4110 Erigeron canadensis HOM05D005208 ORTHO05D006415 1.6e-30 135.6 71 93.0
QL04p005416 Quercus lobata HOM05D005208 ORTHO05D006415 1.6e-30 135.6 72 95.8
Hund19747 Selenicereus undatus HOM05D005208 ORTHO05D006415 1.6e-30 135.6 71 93.0
Thhalv10005187m.g Eutrema salsugineum HOM05D005208 ORTHO05D006415 2.0e-30 135.2 71 94.4
SalBow4G0699 Salvia bowleyana HOM05D005208 ORTHO05D006415 2.0e-30 135.2 71 94.4
THA.LOC104809874 Tarenaya hassleriana HOM05D005208 ORTHO05D006415 2.0e-30 135.2 71 94.4
GSVIVG01032062001 Vitis vinifera HOM05D005208 ORTHO05D006415 2.0e-30 135.2 70 95.7
Medtr8g036205 Medicago truncatula HOM05D005208 ORTHO05D006415 2.7e-30 134.8 70 95.7
QL02p017788 Quercus lobata HOM05D005208 ORTHO05D006415 2.7e-30 134.8 72 95.8
CDE04G0027 Ceratophyllum demersum HOM05D005208 ORTHO05D006415 3.5e-30 134.4 71 91.5
CDE07G1423 Ceratophyllum demersum HOM05D005208 ORTHO05D006415 3.5e-30 134.4 71 91.5
Ca_27575_v3 Cicer arietinum L. HOM05D005208 ORTHO05D006415 3.5e-30 134.4 71 93.0
Oeu039120.1 Olea europaea HOM05D005208 ORTHO05D006415 3.5e-30 134.4 70 94.3
Lj3g0003154 Lotus japonicus HOM05D005208 ORTHO05D006415 4.5e-30 134.0 71 94.4
HanXRQChr16g0519561 Helianthus annuus HOM05D005208 ORTHO05D006415 5.9e-30 133.7 71 93.0
Peaxi162Scf00200g01315 Petunia axillaris HOM05D005208 ORTHO05D006415 5.9e-30 133.7 71 91.5
Hund22069 Selenicereus undatus HOM05D005208 ORTHO05D006415 5.9e-30 133.7 69 94.2
ATR0605G393 Amborella trichopoda HOM05D005208 ORTHO05D006415 7.7e-30 133.3 70 92.9
BcaC03g17248 Brassica carinata HOM05D005208 ORTHO05D006415 1.0e-29 132.9 71 93.0
C02p51820 Brassica napus HOM05D005208 ORTHO05D013951 1.0e-29 132.9 71 93.0
BolC2t11268H Brassica oleracea HOM05D005208 ORTHO05D006415 1.0e-29 132.9 71 93.0
CiPaw.13G003300 Carya illinoinensis HOM05D005208 ORTHO05D006415 1.3e-29 132.5 72 93.1
Aqoxy6G00475 Aquilegia oxysepala HOM05D005208 ORTHO05D006415 1.7e-29 132.1 70 94.3
Migut.H01631 Erythranthe guttata HOM05D005208 ORTHO05D006415 2.2e-29 131.7 71 90.1
BcaC06g31141 Brassica carinata HOM05D005208 ORTHO05D006415 2.9e-29 131.3 71 91.5
Lalb_Chr25g0283181 Lupinus albus HOM05D005208 ORTHO05D006415 3.8e-29 131.0 71 90.1
Solyc09g009640.3 Solanum lycopersicum HOM05D005208 ORTHO05D006415 3.8e-29 131.0 71 91.5
Sopen09g004410 Solanum pennellii HOM05D005208 ORTHO05D006415 3.8e-29 131.0 71 91.5
PGSC0003DMG400002694 Solanum tuberosum HOM05D005208 ORTHO05D006415 3.8e-29 131.0 71 91.5
A02p33690 Brassica napus HOM05D005208 ORTHO05D006415 5.0e-29 130.6 71 91.5
BraA02t08388Z Brassica rapa HOM05D005208 ORTHO05D006415 5.0e-29 130.6 71 91.5
SEGI_02845 Sequoiadendron giganteum HOM05D005208 ORTHO05D006415 5.0e-29 130.6 68 94.1
Lj4g0005394 Lotus japonicus HOM05D005208 ORTHO05D006415 6.5e-29 130.2 70 91.4
Rhsim07G0054400 Rhododendron simsii HOM05D005208 ORTHO05D006415 6.5e-29 130.2 81 82.7
BcaB07g30643 Brassica carinata HOM05D005208 ORTHO05D006415 8.5e-29 129.8 71 91.5
A06p42830 Brassica napus HOM05D005208 ORTHO05D006415 1.1e-28 129.4 70 91.4
C07p34250 Brassica napus HOM05D005208 ORTHO05D006415 1.1e-28 129.4 70 91.4
CAN.G397.27 Capsicum annuum HOM05D005208 ORTHO05D006415 1.5e-28 129.0 70 91.4
vmacro07761 Vaccinium macrocarpon HOM05D005208 ORTHO05D006415 2.5e-28 128.3 81 82.7
BolC7t43954H Brassica oleracea HOM05D005208 ORTHO05D006415 3.2e-28 127.9 69 91.3
BraA06t27195Z Brassica rapa HOM05D005208 ORTHO05D006415 3.2e-28 127.9 69 91.3
Mapoly0087s0020 Marchantia polymorpha HOM05D005208 ORTHO05D006415 3.2e-28 127.9 71 90.1
Nitab4.5_0002068g0050 Nicotiana tabacum HOM05D005208 ORTHO05D006415 3.2e-28 127.9 71 88.7
Pp3c8_4480 Physcomitrium patens HOM05D005208 ORTHO05D006415 3.2e-28 127.9 71 88.7
Glyma.12G239000 Glycine max HOM05D005208 ORTHO05D006415 7.2e-28 126.7 71 91.5
Os08g0177700 Oryza sativa ssp. japonica HOM05D005208 ORTHO05D006415 1.2e-27 125.9 71 87.3
SMO141G0024 Selaginella moellendorffii HOM05D005208 ORTHO05D006415 1.2e-27 125.9 71 85.9
SGA_v2.0_scaffold4G02254 Striga asiatica HOM05D005208 ORTHO05D006415 1.6e-27 125.6 81 81.5
Haze_03233 Corylus avellana HOM05D005208 ORTHO05D006415 2.1e-27 125.2 84 81.0
AagrBONN_evm.TU.Sc2ySwM_368.1897 Anthoceros agrestis HOM05D005208 ORTHO05D006415 2.7e-27 124.8 71 87.3
Pp3c4_9640 Physcomitrium patens HOM05D005208 ORTHO05D006415 2.7e-27 124.8 71 85.9
Aa31LG2G6760 Aethionema arabicum HOM05D005208 ORTHO05D006415 4.7e-27 124.0 93 72.0
AagrBONN_evm.TU.Sc2ySwM_117.3183 Anthoceros agrestis HOM05D005208 ORTHO05D006415 4.7e-27 124.0 71 85.9
Zm00001eb069280 Zea mays HOM05D005208 ORTHO05D006415 1.8e-26 122.1 71 83.1
EL10Ac7g17127 Beta vulgaris HOM05D005208 ORTHO05D006415 3.0e-26 121.3 96 68.8
Zm00001eb431700 Zea mays HOM05D005208 ORTHO05D006415 8.8e-26 119.8 71 83.1
MCO14G462 Micromonas commoda HOM05D005208 ORTHO05D006415 1.2e-25 119.4 71 78.9
vmacro00152 Vaccinium macrocarpon HOM05D005208 ORTHO05D006415 6.3e-24 113.6 102 63.7
Nitab4.5_0023856g0010 Nicotiana tabacum HOM05D005208 ORTHO05D006415 5.4e-23 110.5 61 86.9
Sed0010704 Sechium edule HOM05D005208 ORTHO05D006415 5.4e-23 110.5 57 93.0
BolC7t45182H Brassica oleracea HOM05D005208 ORTHO05D006415 7.0e-23 110.2 64 85.9
Cre03.g164101 Chlamydomonas reinhardtii HOM05D005208 ORTHO05D006415 7.7e-22 106.7 72 69.4
MELO3C000014.2 Cucumis melo HOM05D005208 ORTHO05D006415 5.0e-21 104.0 52 98.1
Cpa.g.sc3559.1 Carica papaya HOM05D005208 ORTHO05D006415 1.5e-20 102.4 51 100.0
Sabra16G0165100 Salix brachista HOM05D005208 ORTHO05D006415 1.5e-20 102.4 142 47.9
PRCOL_00006352 Prasinoderma coloniale HOM05D000731 ORTHO05D005852 4.0e-18 94.4 69 68.1
Haze_27705 Corylus avellana HOM05D005208 ORTHO05D006415 1.7e-16 89.0 68 57.4
TPR.G21719 Trifolium pratense HOM05D005208 ORTHO05D006415 9.2e-15 83.2 43 93.0
Migut.N01478 Erythranthe guttata HOM05D005208 ORTHO05D006415 2.3e-13 78.6 71 62.0
Pp3c3_27830 Physcomitrium patens HOM05D005208 ORTHO05D006415 6.6e-13 77.0 70 64.3
Actinidia31052 Actinidia chinensis HOM05D005208 ORTHO05D006415 1.2e-11 72.8 50 74.0
unitig_8.g3625 Utricularia gibba HOM05D007237 ORTHO05D008854 2.1e-11 72.0 35 100.0
TPR.G34585 Trifolium pratense HOM05D000107 ORTHO05D000062 1.7e-08 62.4 33 90.9
MELO3C030676.2 Cucumis melo HOM05D005208 ORTHO05D006415 4.9e-08 60.8 32 93.8
Sabra01G0090000 Salix brachista HOM05D005208 ORTHO05D009147 2.4e-07 58.5 28 100.0
CAN.G1433.22 Capsicum annuum HOM05D003494 ORTHO05D004033 2.7e-06 55.1 40 57.5
Gohir.A04G061800 Gossypium hirsutum HOM05D003494 ORTHO05D004033 2.7e-06 55.1 43 53.5
Solyc05g055260.4 Solanum lycopersicum HOM05D003494 ORTHO05D004033 2.7e-06 55.1 40 57.5
Sopen05g033700 Solanum pennellii HOM05D003494 ORTHO05D004033 2.7e-06 55.1 40 57.5
PGSC0003DMG400023392 Solanum tuberosum HOM05D003494 ORTHO05D004033 2.7e-06 55.1 40 57.5
AL4G13960 Arabidopsis lyrata HOM05D003494 ORTHO05D004033 3.5e-06 54.7 40 57.5
AT2G23930 Arabidopsis thaliana HOM05D003494 ORTHO05D004033 3.5e-06 54.7 40 57.5
EL10Ac6g14102 Beta vulgaris HOM05D005208 ORTHO05D006415 3.5e-06 54.7 28 92.9
Carub.0004s0309 Capsella rubella HOM05D003494 ORTHO05D004033 3.5e-06 54.7 40 57.5
Glyma.11G086200 Glycine max HOM05D003494 ORTHO05D004033 3.5e-06 54.7 40 55.0
CAN.G645.27 Capsicum annuum HOM05D003494 ORTHO05D004033 4.6e-06 54.3 40 57.5
Peaxi162Scf00173g00010 Petunia axillaris HOM05D003494 ORTHO05D004033 4.6e-06 54.3 40 57.5
Peaxi162Scf00519g00617 Petunia axillaris HOM05D003494 ORTHO05D004033 4.6e-06 54.3 40 57.5
Solyc11g006820.2 Solanum lycopersicum HOM05D003494 ORTHO05D004033 4.6e-06 54.3 40 57.5
Sopen11g002740 Solanum pennellii HOM05D003494 ORTHO05D004033 4.6e-06 54.3 40 57.5
PGSC0003DMG400023981 Solanum tuberosum HOM05D003494 ORTHO05D004033 4.6e-06 54.3 40 57.5
Lj1g0025547 Lotus japonicus HOM05D003494 ORTHO05D004033 6.0e-06 53.9 40 52.5
Sp3g09730 Schrenkiella parvula HOM05D003494 ORTHO05D004033 6.0e-06 53.9 44 52.3
AUR62006200 Chenopodium quinoa HOM05D003494 ORTHO05D004033 7.8e-06 53.5 40 55.0
Cc06_g06010 Coffea canephora HOM05D003494 ORTHO05D004033 7.8e-06 53.5 40 55.0
PRCOL_00006284 Prasinoderma coloniale HOM05D003494 ORTHO05D004033 7.8e-06 53.5 48 50.0


User provided reference genes

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