Gene: Sopen11g002740
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g002740
- Transcript Identifier Sopen11g002740.1
- Gene Type Coding gene
- Location Spenn-ch11 : 1467675-1470148 : negative
Gene Family Information
- ID HOM05D003494
- #Genes/#Species 195/95
- Phylogenetic origin
- ID ORTHO05D004033
- #Genes/#Species 194/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen11g002740.1
Descriptions
- Description probable small nuclear ribonucleoprotein G (SNRNP-G) | CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain , Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type , Like-Sm ribonucleoprotein (LSM)-related domain | BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000387 | IEA | InterPro | spliceosomal snRNP assembly |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G23930 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005681 | IEA | InterPro | spliceosomal complex | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G23930 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT3G11500 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.2.2.7 | RNA processing.pre-mRNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.component Sm-G |