Gene: COL.COLO4_23915

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_23915
  • Transcript Identifier COL.rna22655
  • Gene Type Coding gene
  • Location AWUE01018373.1 : 28002-29717 : positive

Gene Family Information

  • ID HOM05D005208
  • #Genes/#Species 145/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna22655
  • GenBank OMO80841.1
  • id gene23887
  • gene_name COLO4_23915
  • uniprot A0A1R3IE97

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0000956
IEA
GOA Databasenuclear-transcribed mRNA catabolic process
GO:0000956
IEA
InterPronuclear-transcribed mRNA catabolic process

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010920 LSM domain superfamily
IPR001163 LSM domain, eukaryotic/archaea-type
IPR017132 Sm-like protein Lsm7
IPR044641 Sm-like protein Lsm7/SmG
Mapman id Description
16.2.3.7 RNA processing.pre-mRNA splicing.U6-associated LSm accessory ribonucleoprotein complex.component LSm7