Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G031100 Populus trichocarpa HOM05D006093 ORTHO05D007652 1.8e-200 702.6 408 100.0
Sabra03G0017500 Salix brachista HOM05D006093 ORTHO05D007652 7.1e-165 584.3 494 71.9
Manes.11G058700 Manihot esculenta HOM05D006093 ORTHO05D007652 1.1e-149 533.9 419 74.9
CiPaw.01G249800 Carya illinoinensis HOM05D006093 ORTHO05D007652 2.5e-141 506.1 352 73.9
CSS0022367 Camellia sinensis var. sinensis HOM05D006093 ORTHO05D007652 4.2e-141 505.4 330 77.9
Ciclev10025737m.g Citrus clementina HOM05D006093 ORTHO05D007652 4.2e-141 505.4 413 70.2
Hma1.2p1_0017F.1_g011320 Hydrangea macrophylla HOM05D006093 ORTHO05D007652 3.5e-140 502.3 297 84.8
Atru.chr1.2881 Acer truncatum HOM05D006093 ORTHO05D007652 1.5e-138 496.9 354 74.6
COL.COLO4_11898 Corchorus olitorius HOM05D006093 ORTHO05D007652 7.4e-138 494.6 296 83.4
Gohir.D10G082500 Gossypium hirsutum HOM05D006093 ORTHO05D007652 6.2e-137 491.5 296 82.1
TAR626G1009 Trochodendron aralioides HOM05D006093 ORTHO05D007652 1.8e-136 490.0 296 80.4
Duzib235G0399 Durio zibethinus HOM05D006093 ORTHO05D007652 2.4e-136 489.6 340 74.1
Thecc.06G031100 Theobroma cacao HOM05D006093 ORTHO05D007652 4.0e-136 488.8 296 81.8
PSO170G6797 Papaver somniferum HOM05D006093 ORTHO05D007652 2.6e-135 486.1 352 72.4
FAN14G2225 Fragaria x ananassa HOM05D006093 ORTHO05D007652 3.4e-135 485.7 414 66.4
Lj3g0003829 Lotus japonicus HOM05D006093 ORTHO05D007652 5.8e-135 485.0 346 71.4
RcHm_v2.0_Chr2g0134861 Rosa chinensis HOM05D006093 ORTHO05D007652 5.8e-135 485.0 415 67.7
FAN09G4542 Fragaria x ananassa HOM05D006093 ORTHO05D007652 1.3e-134 483.8 414 66.7
TPR.G37262 Trifolium pratense HOM05D006093 ORTHO05D007652 8.4e-134 481.1 332 72.9
MSTRG.11153 Avicennia marina HOM05D006093 ORTHO05D007652 1.1e-133 480.7 295 81.0
FvH4_6g29401 Fragaria vesca HOM05D006093 ORTHO05D007652 5.5e-133 478.4 414 65.7
Eucgr.F03905 Eucalyptus grandis HOM05D006093 ORTHO05D007652 9.3e-133 477.6 294 77.9
Lalb_Chr24g0395421 Lupinus albus HOM05D006093 ORTHO05D007652 1.2e-132 477.2 349 69.9
Thhalv10011553m.g Eutrema salsugineum HOM05D006093 ORTHO05D007652 1.8e-131 473.4 348 72.1
Lj5A75T43 Lonicera japonica HOM05D006093 ORTHO05D007652 3.0e-131 472.6 376 69.9
MBI15_g24195_MAGBIO Magnolia biondii HOM05D006093 ORTHO05D007652 5.1e-131 471.9 297 77.4
Medtr2g104100 Medicago truncatula HOM05D006093 ORTHO05D007652 5.1e-131 471.9 296 78.7
arahy.Tifrunner.gnm1.ann1.5T1ZSX Arachis hypogaea HOM05D006093 ORTHO05D007652 8.7e-131 471.1 295 78.0
arahy.Tifrunner.gnm1.ann1.RDN84X Arachis hypogaea HOM05D006093 ORTHO05D007652 8.7e-131 471.1 295 78.0
QL05p032033 Quercus lobata HOM05D006093 ORTHO05D007652 1.1e-130 470.7 344 70.3
Migut.I00747 Erythranthe guttata HOM05D006093 ORTHO05D007652 2.5e-130 469.5 356 70.2
Sp1g39050 Schrenkiella parvula HOM05D006093 ORTHO05D007652 3.3e-130 469.2 349 73.6
PGSC0003DMG400014146 Solanum tuberosum HOM05D006093 ORTHO05D007652 5.7e-130 468.4 289 79.6
THA.LOC104818014 Tarenaya hassleriana HOM05D006093 ORTHO05D007652 7.4e-130 468.0 351 71.5
BcaC08g43998 Brassica carinata HOM05D006093 ORTHO05D007652 9.7e-130 467.6 297 78.5
CANSAT56G0666 Cannabis sativa HOM05D006093 ORTHO05D007652 9.7e-130 467.6 350 70.3
Glyma.13G366800 Glycine max HOM05D006093 ORTHO05D007652 9.7e-130 467.6 409 61.4
Carub.0001s4146 Capsella rubella HOM05D006093 ORTHO05D007652 3.7e-129 465.7 286 81.1
BolC6t36581H Brassica oleracea HOM05D006093 ORTHO05D007652 6.3e-129 464.9 297 77.8
Gorai.011G089400 Gossypium raimondii HOM05D006093 ORTHO05D007652 8.2e-129 464.5 392 67.3
A05p18970 Brassica napus HOM05D006093 ORTHO05D007652 1.4e-128 463.8 344 73.3
BraA05t20794Z Brassica rapa HOM05D006093 ORTHO05D007652 1.4e-128 463.8 344 73.3
MD17G1215000 Malus domestica HOM05D006093 ORTHO05D007652 1.4e-128 463.8 289 79.2
HanXRQChr02g0033451 Helianthus annuus HOM05D006093 ORTHO05D007652 1.8e-128 463.4 295 76.6
vmacro16879 Vaccinium macrocarpon HOM05D006093 ORTHO05D007652 1.8e-128 463.4 363 68.0
Nitab4.5_0010806g0010 Nicotiana tabacum HOM05D006093 ORTHO05D007652 2.4e-128 463.0 289 77.5
AT1G52500 Arabidopsis thaliana HOM05D006093 ORTHO05D007652 3.1e-128 462.6 296 78.4
EL10Ac9g21886 Beta vulgaris HOM05D006093 ORTHO05D007652 4.1e-128 462.2 354 73.2
CsaV3_4G001910 Cucumis sativus L. HOM05D006093 ORTHO05D007652 2.6e-127 459.5 296 76.7
ECA238G2964 Erigeron canadensis HOM05D005083 ORTHO05D006310 2.6e-127 459.5 331 70.1
Solyc03g117510.4 Solanum lycopersicum HOM05D006093 ORTHO05D007652 2.6e-127 459.5 289 78.5
TWI12G0620 Tripterygium wilfordii HOM05D006093 ORTHO05D007652 4.5e-127 458.8 325 72.0
VMungo1080G1109 Vigna mungo HOM05D006093 ORTHO05D007652 4.5e-127 458.8 405 62.5
Sopen03g036410 Solanum pennellii HOM05D006093 ORTHO05D007652 1.0e-126 457.6 289 78.5
AUR62016319 Chenopodium quinoa HOM05D006093 ORTHO05D007652 3.8e-126 455.7 355 68.7
Manes.04G110800 Manihot esculenta HOM05D006093 ORTHO05D007652 3.8e-126 455.7 413 65.9
Sed0013008 Sechium edule HOM05D006093 ORTHO05D007652 8.5e-126 454.5 296 75.7
Aa31LG10G2500 Aethionema arabicum HOM05D006093 ORTHO05D007652 1.4e-125 453.8 377 65.0
Cc04_g04560 Coffea canephora HOM05D006093 ORTHO05D007652 3.2e-125 452.6 285 77.9
BcaB02g10988 Brassica carinata HOM05D006093 ORTHO05D007652 4.2e-125 452.2 345 72.5
FAN05G1370 Fragaria x ananassa HOM05D006093 ORTHO05D007652 5.5e-125 451.8 414 62.8
ATR0800G026 Amborella trichopoda HOM05D006093 ORTHO05D007652 7.2e-125 451.4 351 67.8
Ca_01048_v3 Cicer arietinum L. HOM05D006093 ORTHO05D007652 2.7e-124 449.5 438 57.8
AUR62011503 Chenopodium quinoa HOM05D006093 ORTHO05D007652 4.6e-124 448.7 290 77.6
Phvul.005G179300 Phaseolus vulgaris HOM05D006093 ORTHO05D007652 6.1e-124 448.4 405 61.0
Cpa.g.sc167.9 Carica papaya HOM05D006093 ORTHO05D007652 1.8e-123 446.8 267 80.9
Gohir.A10G068900 Gossypium hirsutum HOM05D006093 ORTHO05D007652 2.3e-123 446.4 418 67.9
HPP92_003851 Vanilla planifolia HOM05D006093 ORTHO05D007652 3.3e-122 442.6 354 63.0
CDE05G1298 Ceratophyllum demersum HOM05D006093 ORTHO05D007652 1.4e-120 437.2 292 74.3
SalBow2G3638 Salvia bowleyana HOM05D006093 ORTHO05D007652 3.1e-120 436.0 326 69.3
CAN.G407.11 Capsicum annuum HOM05D006093 ORTHO05D007652 3.4e-119 432.6 289 75.1
Rhsim12G0190000 Rhododendron simsii HOM05D006093 ORTHO05D007652 7.7e-119 431.4 333 67.0
DCAR_025523 Daucus carota HOM05D006093 ORTHO05D007652 2.9e-118 429.5 260 80.4
Peaxi162Scf00553g00627 Petunia axillaris HOM05D006093 ORTHO05D007652 3.8e-118 429.1 320 68.8
Nn8g39568 Nelumbo nucifera HOM05D006093 ORTHO05D007652 2.7e-116 422.9 260 81.9
ClCG07G012240 Citrullus lanatus HOM05D006093 ORTHO05D007652 2.3e-115 419.9 377 59.4
Hund00502 Selenicereus undatus HOM05D006093 ORTHO05D007652 3.0e-115 419.5 260 77.7
GSVIVG01017379001 Vitis vinifera HOM05D006093 ORTHO05D007652 3.9e-115 419.1 268 78.0
ECA247G0880 Erigeron canadensis HOM05D006093 ORTHO05D007652 3.5e-111 406.0 348 62.6
Os08g0304900 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 5.9e-111 405.2 296 67.9
Ah.01g020480 Amaranthus hybridus HOM05D006093 ORTHO05D007652 1.0e-110 404.4 330 67.3
Lsat_1_v5_gn_1_34180 Lactuca sativa HOM05D006093 ORTHO05D007652 1.7e-110 403.7 331 63.1
unitig_62.g23594 Utricularia gibba HOM05D006093 ORTHO05D007652 1.7e-110 403.7 408 53.9
Haze_16582 Corylus avellana HOM05D006093 ORTHO05D007652 2.9e-110 402.9 298 74.5
Os06g0643600 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 5.5e-109 398.7 289 68.9
Zm00001eb275260 Zea mays HOM05D006093 ORTHO05D007652 7.2e-109 398.3 288 67.4
Psat5g303120 Pisum sativum HOM05D006093 ORTHO05D007652 1.1e-106 391.0 349 61.0
SGA_v2.0_scaffold5G02719 Striga asiatica HOM05D006093 ORTHO05D007652 1.5e-106 390.6 322 64.9
PGR102G2220 Punica granatum HOM05D006093 ORTHO05D007652 1.3e-105 387.5 280 71.8
HanXRQChr02g0033461 Helianthus annuus HOM05D006093 ORTHO05D007652 9.1e-104 381.3 291 68.4
MELO3C017842.2 Cucumis melo HOM05D006093 ORTHO05D007652 4.5e-103 379.0 327 61.2
HanXRQChr02g0033471 Helianthus annuus HOM05D006093 ORTHO05D007652 1.0e-102 377.9 356 61.0
Prupe.3G090700 Prunus persica HOM05D006093 ORTHO05D007652 5.5e-101 372.1 272 71.3
Nitab4.5_0003072g0060 Nicotiana tabacum HOM05D006093 ORTHO05D007652 1.4e-99 367.5 324 61.1
CARHR042600 Cardamine hirsuta HOM05D006093 ORTHO05D007652 1.8e-99 367.1 222 81.5
AL1G60740 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 2.3e-99 366.7 222 81.5
Actinidia08791 Actinidia chinensis HOM05D006093 ORTHO05D007652 2.0e-98 363.6 219 81.7
Dinv30625 Davidia involucrata HOM05D006093 ORTHO05D007652 7.5e-98 361.7 311 66.9
Sc10g0008130 Simmondsia chinensis HOM05D006093 ORTHO05D007652 7.0e-96 355.1 216 79.2
Cfa001944 Carpinus fangiana HOM05D006093 ORTHO05D007652 2.1e-92 343.6 201 84.1
Pp3c23_21520 Physcomitrium patens HOM05D006093 ORTHO05D007652 4.5e-87 325.9 283 57.6
SHI11225 Sapria himalayana HOM05D006093 ORTHO05D007652 1.3e-86 324.3 327 54.7
Pp3c8_24280 Physcomitrium patens HOM05D006093 ORTHO05D007652 2.0e-82 310.5 359 47.9
Mapoly0015s0062 Marchantia polymorpha HOM05D006093 ORTHO05D007652 2.2e-81 307.0 276 54.0
SMO367G0330 Selaginella moellendorffii HOM05D006093 ORTHO05D007652 3.5e-79 299.7 245 62.9
Pp3c24_20180 Physcomitrium patens HOM05D006093 ORTHO05D007652 5.8e-74 282.3 354 46.0
PSO017G4202 Papaver somniferum HOM05D006093 ORTHO05D007652 5.4e-72 275.8 176 77.8
Cre10.g428433 Chlamydomonas reinhardtii HOM05D006093 ORTHO05D007652 3.4e-66 256.5 305 46.6
Psat6g066000 Pisum sativum HOM05D006093 ORTHO05D007652 2.2e-65 253.8 183 70.5
CBR_g884 Chara braunii HOM05D006093 ORTHO05D007652 2.5e-61 240.4 231 49.8
Cfa001945 Carpinus fangiana HOM05D006093 ORTHO05D007652 5.1e-54 216.1 358 43.6
MCO15G481 Micromonas commoda HOM05D006093 ORTHO05D007652 1.6e-52 211.1 271 42.1
GSVIVG01026354001 Vitis vinifera HOM05D006093 ORTHO05D007652 3.4e-50 203.4 113 85.8
Eucgr.L03570 Eucalyptus grandis HOM05D006093 ORTHO05D007652 7.6e-50 202.2 114 80.7
Cfa026683 Carpinus fangiana HOM05D006093 ORTHO05D007652 1.7e-46 191.0 389 29.8
Gohir.D10G074901 Gossypium hirsutum HOM05D006093 ORTHO05D007652 1.1e-45 188.3 121 76.0
SEGI_24777 Sequoiadendron giganteum HOM05D006093 ORTHO05D007652 3.1e-35 153.7 103 71.8
AL7G45760 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 5.3e-35 152.9 101 77.2
Actinidia08958 Actinidia chinensis HOM05D006093 ORTHO05D007652 1.6e-31 141.4 77 85.7
Oeu058023.3 Olea europaea HOM05D006093 ORTHO05D005440 3.9e-30 136.7 153 52.9
Dinv01702 Davidia involucrata HOM05D006093 ORTHO05D007652 8.7e-30 135.6 91 68.1
Dinv21460 Davidia involucrata HOM05D006093 ORTHO05D007652 4.8e-28 129.8 77 77.9
CARHR042620 Cardamine hirsuta HOM05D006093 ORTHO05D007652 8.7e-22 109.0 128 53.1
AL1G60750 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 5.7e-21 106.3 75 72.0
SEGI_39009 Sequoiadendron giganteum HOM05D006093 ORTHO05D007652 4.8e-20 103.2 76 65.8
Sabra14G0094900 Salix brachista HOM05D006093 ORTHO05D007652 3.4e-18 97.1 56 87.5
Medtr3g118550 Medicago truncatula HOM05D006093 ORTHO05D007652 2.5e-16 90.9 127 46.5
SGA_v2.0_scaffold72G24067 Striga asiatica HOM05D006093 ORTHO05D007652 7.1e-16 89.4 98 50.0
Thecc.09G173900 Theobroma cacao HOM05D006093 ORTHO05D007652 6.1e-15 86.3 79 58.2
Pp3c21_8660 Physcomitrium patens HOM05D016293 ORTHO05D018978 2.7e-07 60.8 88 39.8
BolC4t26141H Brassica oleracea HOM05D035675 ORTHO05D007652 8.8e-06 55.8 64 56.2


User provided reference genes

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