Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G137800 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 2.7e-58 228.4 113 100.0
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 4.1e-46 188.0 97 94.8
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 3.8e-44 181.4 97 89.7
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 8.5e-44 180.3 97 88.7
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 2.5e-43 178.7 97 86.6
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 4.7e-42 174.5 97 84.5
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 2.3e-41 172.2 97 83.5
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 3.0e-41 171.8 93 84.9
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 4.0e-41 171.4 97 84.5
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 4.0e-41 171.4 97 84.5
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 5.2e-41 171.0 93 83.9
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 3.4e-40 168.3 97 82.5
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 3.4e-40 168.3 93 82.8
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 4.4e-40 167.9 95 82.1
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 5.7e-40 167.5 99 79.8
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 5.7e-40 167.5 93 83.9
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 1.7e-39 166.0 97 79.4
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 1.7e-39 166.0 93 80.6
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 1.7e-39 166.0 97 78.4
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 2.2e-39 165.6 97 80.4
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 2.8e-39 165.2 92 84.8
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 2.8e-39 165.2 97 79.4
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 2.8e-39 165.2 97 78.4
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 2.8e-39 165.2 97 78.4
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 2.8e-39 165.2 97 78.4
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 2.8e-39 165.2 97 80.4
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 4.8e-39 164.5 93 82.8
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 4.8e-39 164.5 93 82.8
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 4.8e-39 164.5 97 79.4
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 4.8e-39 164.5 97 78.4
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 6.3e-39 164.1 97 79.4
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 6.3e-39 164.1 97 80.4
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 6.3e-39 164.1 97 77.3
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 8.3e-39 163.7 93 81.7
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 8.3e-39 163.7 97 78.4
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 1.1e-38 163.3 95 81.1
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 1.1e-38 163.3 97 80.4
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 1.4e-38 162.9 93 80.6
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 1.4e-38 162.9 97 79.4
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 1.4e-38 162.9 93 81.7
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 1.8e-38 162.5 93 81.7
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 1.8e-38 162.5 93 81.7
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 1.8e-38 162.5 93 81.7
Cpa.g.sc3384.1 Carica papaya HOM05D005431 ORTHO05D006762 2.4e-38 162.2 96 80.2
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 2.4e-38 162.2 93 80.6
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 2.4e-38 162.2 92 80.4
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 2.4e-38 162.2 97 80.4
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 3.1e-38 161.8 93 80.6
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 3.1e-38 161.8 93 80.6
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 4.1e-38 161.4 97 78.4
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 4.1e-38 161.4 93 77.4
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 4.1e-38 161.4 97 78.4
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 4.1e-38 161.4 99 76.8
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 5.4e-38 161.0 97 78.4
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 5.4e-38 161.0 92 83.7
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 5.4e-38 161.0 92 83.7
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 5.4e-38 161.0 92 80.4
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 7.0e-38 160.6 93 80.6
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 7.0e-38 160.6 93 81.7
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 7.0e-38 160.6 93 81.7
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 7.0e-38 160.6 97 78.4
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 9.1e-38 160.2 97 76.3
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 1.2e-37 159.8 93 78.5
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 1.2e-37 159.8 92 81.5
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 1.6e-37 159.5 93 79.6
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 2.0e-37 159.1 93 78.5
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 2.0e-37 159.1 97 75.3
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 2.7e-37 158.7 93 80.6
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 3.5e-37 158.3 90 85.6
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 4.5e-37 157.9 93 76.3
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 5.9e-37 157.5 97 76.3
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 7.7e-37 157.1 92 76.1
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 1.3e-36 156.4 92 75.0
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 2.9e-36 155.2 93 78.5
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 3.8e-36 154.8 91 78.0
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 3.8e-36 154.8 93 77.4
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 8.5e-36 153.7 93 75.3
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 1.5e-35 152.9 97 73.2
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 2.5e-35 152.1 93 74.2
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 5.5e-35 151.0 97 71.1
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 5.5e-35 151.0 93 74.2
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 1.2e-34 149.8 99 68.7
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 1.2e-34 149.8 93 72.0
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 4.7e-34 147.9 97 72.2
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 4.7e-34 147.9 97 72.2
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 1.0e-33 146.7 91 73.6
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 1.8e-33 146.0 97 71.1
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 5.2e-33 144.4 95 76.8
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 5.7e-32 141.0 101 69.3
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 3.7e-31 138.3 93 74.2
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 1.4e-30 136.3 93 64.5
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 3.8e-28 128.3 102 55.9
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 6.6e-28 127.5 75 81.3
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 8.6e-28 127.1 94 60.6
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 1.1e-27 126.7 94 59.6
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 1.9e-27 125.9 97 68.0
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 2.3e-25 119.0 72 76.4
MBI05_g33993_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 8.9e-25 117.1 94 63.8
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 4.4e-24 114.8 93 64.5
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 1.3e-23 113.2 72 75.0
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 1.8e-22 109.4 61 86.9
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 9.5e-19 97.1 68 63.2
TPR.G5921 Trifolium pratense HOM05D005431 ORTHO05D006762 2.8e-18 95.5 54 87.0
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 2.6e-16 89.0 92 51.1
Pp3c25_8310 Physcomitrium patens HOM05D005431 ORTHO05D006762 4.4e-16 88.2 90 48.9
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 8.3e-15 84.0 54 70.4
SHI14712 Sapria himalayana HOM05D000001 ORTHO05D009229 1.1e-14 83.6 44 84.1
AagrBONN_evm.TU.Sc2ySwM_228.2880 Anthoceros agrestis HOM05D005431 ORTHO05D006762 2.4e-14 82.4 90 46.7
SHI14714 Sapria himalayana HOM05D005431 ORTHO05D006762 2.4e-14 82.4 52 71.2
C08p12570 Brassica napus HOM05D005431 ORTHO05D006762 3.0e-12 75.5 45 77.8
BolC8t48895H Brassica oleracea HOM05D005431 ORTHO05D006762 3.0e-12 75.5 45 77.8
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 5.0e-12 74.7 46 76.1
SMO116G0263 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 3.3e-11 72.0 81 44.4
CAN.G134.235 Capsicum annuum HOM05D005431 ORTHO05D006762 1.4e-09 66.6 51 60.8
SGA_v2.0_scaffold612G53193 Striga asiatica HOM05D005431 ORTHO05D006762 6.8e-09 64.3 48 60.4
ClCG02G009830 Citrullus lanatus HOM05D005431 ORTHO05D006762 4.4e-08 61.6 41 73.2
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 7.5e-08 60.8 43 60.5
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 3.7e-07 58.5 33 78.8
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 3.2e-06 55.5 33 75.8
SEGI_17961 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 3.2e-06 55.5 62 46.8
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 9.2e-06 53.9 31 71.0


User provided reference genes

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