Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO729G0215 Papaver somniferum HOM05D005037 ORTHO05D006274 1.3e-143 513.1 261 100.0
PSO673G0007 Papaver somniferum HOM05D005037 ORTHO05D006274 7.7e-80 301.2 273 62.6
PSO421G0325 Papaver somniferum HOM05D005037 ORTHO05D006274 2.9e-79 299.3 273 63.0
TAR381G0890 Trochodendron aralioides HOM05D005037 ORTHO05D006274 1.4e-73 280.4 258 60.5
PSO541G3185 Papaver somniferum HOM05D005037 ORTHO05D006274 9.1e-73 277.7 258 60.1
PSO675G6067 Papaver somniferum HOM05D005037 ORTHO05D006274 9.1e-73 277.7 258 60.1
Manes.02G173400 Manihot esculenta HOM05D005037 ORTHO05D006274 3.4e-72 275.8 258 58.9
Nn5g28553 Nelumbo nucifera HOM05D005037 ORTHO05D006274 1.7e-71 273.5 258 57.8
Sc02g0004500 Simmondsia chinensis HOM05D005037 ORTHO05D006274 5.0e-71 271.9 258 58.1
Cc10_g13130 Coffea canephora HOM05D005037 ORTHO05D006274 6.5e-71 271.6 258 57.0
SalBow7G3864 Salvia bowleyana HOM05D005037 ORTHO05D006274 1.4e-70 270.4 258 57.4
Actinidia16585 Actinidia chinensis HOM05D005037 ORTHO05D006274 7.2e-70 268.1 252 57.9
Rhsim03G0093500 Rhododendron simsii HOM05D005037 ORTHO05D006274 3.6e-69 265.8 258 57.4
ATR1136G011 Amborella trichopoda HOM05D005037 ORTHO05D006274 4.7e-69 265.4 258 57.0
Lj4A690T47 Lonicera japonica HOM05D005037 ORTHO05D006274 6.1e-69 265.0 258 57.0
vmacro08710 Vaccinium macrocarpon HOM05D005037 ORTHO05D006274 6.1e-69 265.0 258 57.0
PSO017G3306 Papaver somniferum HOM05D005037 ORTHO05D006274 1.4e-68 263.8 204 72.5
Atru.chr13.1666 Acer truncatum HOM05D005037 ORTHO05D006274 1.8e-68 263.5 258 57.4
Ciclev10001639m.g Citrus clementina HOM05D005037 ORTHO05D006274 2.3e-68 263.1 258 56.6
Migut.C01102 Erythranthe guttata HOM05D005037 ORTHO05D006274 2.3e-68 263.1 242 59.1
Nitab4.5_0002972g0050 Nicotiana tabacum HOM05D005037 ORTHO05D006274 5.1e-68 261.9 258 57.0
Thecc.08G141200 Theobroma cacao HOM05D005037 ORTHO05D006274 5.1e-68 261.9 258 56.6
Duzib041G0013 Durio zibethinus HOM05D005037 ORTHO05D006274 6.7e-68 261.5 258 56.6
Potri.002G073200 Populus trichocarpa HOM05D005037 ORTHO05D006274 6.7e-68 261.5 258 56.2
MSTRG.1382 Avicennia marina HOM05D005037 ORTHO05D006274 1.1e-67 260.8 258 55.4
Duzib116G0940 Durio zibethinus HOM05D005037 ORTHO05D006274 1.1e-67 260.8 258 55.8
Gohir.D02G074100 Gossypium hirsutum HOM05D005037 ORTHO05D006274 1.1e-67 260.8 258 56.2
Gorai.005G083500 Gossypium raimondii HOM05D005037 ORTHO05D006274 1.1e-67 260.8 258 56.2
Gohir.A02G068100 Gossypium hirsutum HOM05D005037 ORTHO05D006274 1.5e-67 260.4 258 56.2
Aqoxy6G00356 Aquilegia oxysepala HOM05D005037 ORTHO05D006274 2.6e-67 259.6 258 57.4
Cpa.g.sc13.102 Carica papaya HOM05D005037 ORTHO05D006274 2.6e-67 259.6 258 56.2
Peaxi162Scf00066g01930 Petunia axillaris HOM05D005037 ORTHO05D006274 4.4e-67 258.8 258 56.2
Hund17388 Selenicereus undatus HOM05D005037 ORTHO05D006274 4.4e-67 258.8 258 55.8
PSO673G0037 Papaver somniferum HOM05D005037 ORTHO05D006274 5.7e-67 258.5 217 65.0
Solyc04g064570.3 Solanum lycopersicum HOM05D005037 ORTHO05D006274 5.7e-67 258.5 258 56.6
Sopen04g026520 Solanum pennellii HOM05D005037 ORTHO05D006274 5.7e-67 258.5 258 56.6
PGSC0003DMG400024852 Solanum tuberosum HOM05D005037 ORTHO05D006274 5.7e-67 258.5 258 56.6
Nitab4.5_0000174g0240 Nicotiana tabacum HOM05D005037 ORTHO05D006274 7.4e-67 258.1 258 56.2
Oeu002392.1 Olea europaea HOM05D005037 ORTHO05D006274 7.4e-67 258.1 258 56.2
Sabra05G0142600 Salix brachista HOM05D005037 ORTHO05D006274 1.3e-66 257.3 259 57.1
Aa31LG6G9500 Aethionema arabicum HOM05D005037 ORTHO05D006274 1.7e-66 256.9 261 55.9
unitig_747.g21501 Utricularia gibba HOM05D005037 ORTHO05D006274 1.7e-66 256.9 258 55.8
Sed0001170 Sechium edule HOM05D005037 ORTHO05D006274 2.2e-66 256.5 259 54.1
ECA233G3664 Erigeron canadensis HOM05D005037 ORTHO05D006274 2.8e-66 256.1 257 56.4
CAN.G657.3 Capsicum annuum HOM05D005037 ORTHO05D006274 3.7e-66 255.8 258 55.8
DCAR_015244 Daucus carota HOM05D005037 ORTHO05D006274 4.8e-66 255.4 266 55.6
HanXRQChr04g0109491 Helianthus annuus HOM05D005037 ORTHO05D006274 4.8e-66 255.4 255 56.1
DCAR_019815 Daucus carota HOM05D005037 ORTHO05D006274 6.3e-66 255.0 266 55.3
MELO3C010584.2 Cucumis melo HOM05D005037 ORTHO05D006274 8.2e-66 254.6 259 54.1
GSVIVG01010010001 Vitis vinifera HOM05D005037 ORTHO05D006274 1.1e-65 254.2 259 56.8
Eucgr.G02653 Eucalyptus grandis HOM05D005037 ORTHO05D006274 1.4e-65 253.8 258 54.3
AUR62027497 Chenopodium quinoa HOM05D005037 ORTHO05D006274 1.8e-65 253.4 258 55.0
TWI32G0322 Tripterygium wilfordii HOM05D005037 ORTHO05D006274 1.8e-65 253.4 258 55.0
EL10Ac4g08872 Beta vulgaris HOM05D005037 ORTHO05D006274 2.4e-65 253.1 258 54.7
CsaV3_6G035600 Cucumis sativus L. HOM05D005037 ORTHO05D006274 3.1e-65 252.7 259 53.7
CiPaw.16G018700 Carya illinoinensis HOM05D005037 ORTHO05D006274 5.3e-65 251.9 258 54.7
ClCG08G002740 Citrullus lanatus HOM05D005037 ORTHO05D006274 5.3e-65 251.9 259 53.3
PGR142G4097 Punica granatum HOM05D005037 ORTHO05D006274 5.3e-65 251.9 258 53.5
EL10Ac1g01450 Beta vulgaris HOM05D005037 ORTHO05D006274 7.0e-65 251.5 258 54.3
A10p07730 Brassica napus HOM05D005037 ORTHO05D006274 9.1e-65 251.1 258 54.7
BraSC36t46032Z Brassica rapa HOM05D005037 ORTHO05D006274 9.1e-65 251.1 258 54.7
Haze_17689 Corylus avellana HOM05D005037 ORTHO05D006274 9.1e-65 251.1 258 53.5
Sp1g33080 Schrenkiella parvula HOM05D005037 ORTHO05D006274 9.1e-65 251.1 258 55.0
Potri.005G186700 Populus trichocarpa HOM05D005037 ORTHO05D006274 1.2e-64 250.8 259 55.6
CDE02G2089 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 2.0e-64 250.0 258 53.5
AUR62033983 Chenopodium quinoa HOM05D005037 ORTHO05D006274 2.0e-64 250.0 258 54.3
MD05G1011400 Malus domestica HOM05D005037 ORTHO05D006274 2.0e-64 250.0 258 52.7
FvH4_2g15010 Fragaria vesca HOM05D005037 ORTHO05D006274 3.5e-64 249.2 242 54.1
Ah.10g032080 Amaranthus hybridus HOM05D005037 ORTHO05D006274 4.5e-64 248.8 258 54.7
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 4.5e-64 248.8 258 53.1
Thhalv10011594m.g Eutrema salsugineum HOM05D005037 ORTHO05D006274 4.5e-64 248.8 258 55.0
TWI60G0144 Tripterygium wilfordii HOM05D005037 ORTHO05D006274 4.5e-64 248.8 258 54.7
Prupe.8G016400 Prunus persica HOM05D005037 ORTHO05D006274 7.7e-64 248.1 258 52.7
AL1G51980 Arabidopsis lyrata HOM05D005037 ORTHO05D006274 1.0e-63 247.7 258 54.7
CARHR035400 Cardamine hirsuta HOM05D005037 ORTHO05D006274 1.0e-63 247.7 258 55.0
Lsat_1_v5_gn_1_9740 Lactuca sativa HOM05D005037 ORTHO05D006274 1.0e-63 247.7 255 55.3
THA.LOC104798858 Tarenaya hassleriana HOM05D005037 ORTHO05D006274 1.3e-63 247.3 254 54.3
Carub.0001s3480 Capsella rubella HOM05D005037 ORTHO05D006274 1.7e-63 246.9 258 54.7
RcHm_v2.0_Chr6g0277561 Rosa chinensis HOM05D005037 ORTHO05D006274 1.7e-63 246.9 242 53.3
SGA_v2.0_scaffold25G11149 Striga asiatica HOM05D005037 ORTHO05D006274 1.7e-63 246.9 278 50.7
AT1G43860 Arabidopsis thaliana HOM05D005037 ORTHO05D006274 3.8e-63 245.7 258 54.3
HPP92_020501 Vanilla planifolia HOM05D005037 ORTHO05D006274 3.8e-63 245.7 242 57.0
BcaC05g27657 Brassica carinata HOM05D005037 ORTHO05D006274 1.9e-62 243.4 258 53.1
CANSAT54G1160 Cannabis sativa HOM05D005037 ORTHO05D006274 2.5e-62 243.0 259 51.7
HPP92_020498 Vanilla planifolia HOM05D005037 ORTHO05D006274 2.5e-62 243.0 242 56.2
A05p21790 Brassica napus HOM05D005037 ORTHO05D006274 3.2e-62 242.7 258 52.7
BolC5t32377H Brassica oleracea HOM05D005037 ORTHO05D006274 3.2e-62 242.7 258 52.7
BraA05t21100Z Brassica rapa HOM05D005037 ORTHO05D006274 3.2e-62 242.7 258 52.7
BcaB07g33972 Brassica carinata HOM05D005037 ORTHO05D006274 4.2e-62 242.3 258 53.5
FAN24G2486 Fragaria x ananassa HOM05D005037 ORTHO05D006274 4.2e-62 242.3 245 53.1
C05p36450 Brassica napus HOM05D005037 ORTHO05D006274 9.4e-62 241.1 258 52.7
QL09p029039 Quercus lobata HOM05D005037 ORTHO05D006274 1.2e-61 240.7 254 52.4
BcaB02g11416 Brassica carinata HOM05D005037 ORTHO05D006274 4.7e-61 238.8 257 52.9
SHI09275 Sapria himalayana HOM05D005037 ORTHO05D006274 3.0e-60 236.1 258 52.3
FAN27G1276 Fragaria x ananassa HOM05D005037 ORTHO05D006274 6.7e-60 235.0 245 52.7
SEGI_36163 Sequoiadendron giganteum HOM05D005037 ORTHO05D006274 4.8e-58 228.8 250 50.0
Lalb_Chr02g0149921 Lupinus albus HOM05D005037 ORTHO05D006274 6.3e-58 228.4 251 51.8
arahy.Tifrunner.gnm1.ann1.RY8QGI Arachis hypogaea HOM05D005037 ORTHO05D006274 8.2e-58 228.0 250 49.2
arahy.Tifrunner.gnm1.ann1.E7XDIB Arachis hypogaea HOM05D005037 ORTHO05D006274 1.4e-57 227.3 251 49.4
arahy.Tifrunner.gnm1.ann1.HCD3KF Arachis hypogaea HOM05D005037 ORTHO05D006274 1.8e-57 226.9 251 49.4
Lalb_Chr21g0311851 Lupinus albus HOM05D005037 ORTHO05D006274 5.3e-57 225.3 251 51.0
Lj1g0018953 Lotus japonicus HOM05D005037 ORTHO05D006274 7.0e-57 224.9 259 49.8
Pp3c4_180 Physcomitrium patens HOM05D005037 ORTHO05D006274 1.6e-56 223.8 258 46.9
Ca_30116_v3 Cicer arietinum L. HOM05D005037 ORTHO05D006274 2.7e-56 223.0 259 50.2
ECA234G0804 Erigeron canadensis HOM05D005037 ORTHO05D006274 2.7e-56 223.0 257 51.0
Os08g0107500 Oryza sativa ssp. japonica HOM05D005037 ORTHO05D006274 3.5e-56 222.6 242 49.6
Medtr6g085170 Medicago truncatula HOM05D005037 ORTHO05D006274 5.9e-56 221.9 251 50.6
TPR.G31447 Trifolium pratense HOM05D005037 ORTHO05D006274 5.9e-56 221.9 251 50.6
Psat1g039480 Pisum sativum HOM05D005037 ORTHO05D006274 7.7e-56 221.5 259 49.8
VMungo0540G1405 Vigna mungo HOM05D005037 ORTHO05D006274 7.7e-56 221.5 259 48.6
CSS0001186 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 1.0e-55 221.1 216 57.4
Glyma.14G119400 Glycine max HOM05D005037 ORTHO05D006274 1.0e-55 221.1 259 48.3
Lj4g0018852 Lotus japonicus HOM05D005037 ORTHO05D006274 1.0e-55 221.1 259 49.0
Zm00001eb260230 Zea mays HOM05D005037 ORTHO05D006274 2.9e-55 219.5 242 48.8
Phvul.006G102500 Phaseolus vulgaris HOM05D005037 ORTHO05D006274 3.8e-55 219.2 259 48.3
Glyma.11G142700 Glycine max HOM05D005037 ORTHO05D006274 2.3e-52 209.9 259 47.1
SMO348G0060 Selaginella moellendorffii HOM05D005037 ORTHO05D006274 3.0e-52 209.5 253 47.8
AagrBONN_evm.TU.Sc2ySwM_117.3544 Anthoceros agrestis HOM05D005037 ORTHO05D006274 9.1e-49 198.0 242 45.9
Oeu001556.2 Olea europaea HOM05D005037 ORTHO05D006274 1.1e-46 191.0 253 47.4
FAN20G2613 Fragaria x ananassa HOM05D005037 ORTHO05D006274 9.4e-46 188.0 199 53.8
Dinv41137 Davidia involucrata HOM05D005037 ORTHO05D006274 1.6e-45 187.2 258 47.3
CSS0023189 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 2.1e-45 186.8 216 50.9
vmacro21120 Vaccinium macrocarpon HOM05D005037 ORTHO05D006274 6.3e-42 175.3 160 59.4
FAN15G0656 Fragaria x ananassa HOM05D005037 ORTHO05D006274 4.1e-41 172.6 155 58.7
SMO272G0010 Selaginella moellendorffii HOM05D005037 ORTHO05D006274 7.0e-41 171.8 174 55.2
Cfa018383 Carpinus fangiana HOM05D005037 ORTHO05D006274 1.0e-39 167.9 191 50.8
Ca_25512_v3 Cicer arietinum L. HOM05D005037 ORTHO05D006274 8.6e-39 164.9 194 49.5
COL.COLO4_33811 Corchorus olitorius HOM05D005037 ORTHO05D006274 1.7e-34 150.6 245 40.0
Cre01.g017500 Chlamydomonas reinhardtii HOM05D005037 ORTHO05D006274 8.3e-34 148.3 246 36.6
CSS0016864 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 2.7e-32 143.3 162 51.9
CSS0012113 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 7.3e-30 135.2 168 48.2
PRCOL_00006527 Prasinoderma coloniale HOM05D005037 ORTHO05D006274 3.6e-29 132.9 243 35.4
CSS0029081 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 4.0e-28 129.4 168 47.0
C06p00420 Brassica napus HOM05D005037 ORTHO05D006274 2.3e-23 113.6 133 51.1
MCO07G375 Micromonas commoda HOM05D005037 ORTHO05D006274 6.6e-23 112.1 176 37.5
C06p00390 Brassica napus HOM05D005037 ORTHO05D006274 8.6e-23 111.7 133 48.9
CBR_g48721 Chara braunii HOM05D005037 ORTHO05D006274 1.2e-21 107.8 160 36.9
vmacro21119 Vaccinium macrocarpon HOM05D005037 ORTHO05D006274 1.6e-16 90.9 111 45.0
RcHm_v2.0_Chr2g0145391 Rosa chinensis HOM05D005037 ORTHO05D006274 3.0e-15 86.7 80 57.5
Actinidia15170 Actinidia chinensis HOM05D005037 ORTHO05D006274 9.5e-14 81.6 81 54.3
MD05G1011500 Malus domestica HOM05D005037 ORTHO05D006274 1.8e-12 77.4 98 43.9
PSO729G0072 Papaver somniferum HOM05D005037 ORTHO05D006274 3.1e-12 76.6 143 36.4
Mapoly0003s0227 Marchantia polymorpha HOM05D005037 ORTHO05D006274 8.4e-10 68.6 97 37.1
Actinidia15171 Actinidia chinensis HOM05D005037 ORTHO05D006274 1.9e-06 57.4 82 40.2


User provided reference genes

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