Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G4257 Papaver somniferum HOM05D003786 ORTHO05D004375 1.9e-184 649.0 327 100.0
PSO541G4585 Papaver somniferum HOM05D003786 ORTHO05D004375 1.1e-155 553.5 290 96.6
COL.COLO4_25255 Corchorus olitorius HOM05D003786 ORTHO05D004375 1.5e-64 250.8 223 56.5
TAR369G0701 Trochodendron aralioides HOM05D003786 ORTHO05D004375 1.6e-63 247.3 223 57.4
Dinv01513 Davidia involucrata HOM05D003786 ORTHO05D004375 3.1e-62 243.0 223 56.5
TWI31G1207 Tripterygium wilfordii HOM05D003786 ORTHO05D004375 6.9e-62 241.9 223 57.8
Manes.11G140700 Manihot esculenta HOM05D003786 ORTHO05D004375 1.2e-61 241.1 223 57.0
Gohir.D13G002900 Gossypium hirsutum HOM05D003786 ORTHO05D004375 2.0e-61 240.4 223 55.2
CSS0045889 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 4.5e-61 239.2 223 54.7
Gorai.013G002800 Gossypium raimondii HOM05D003786 ORTHO05D004375 1.0e-60 238.0 223 54.7
Rhsim13G0091800 Rhododendron simsii HOM05D003786 ORTHO05D004375 2.9e-60 236.5 223 54.7
Duzib168G0697 Durio zibethinus HOM05D003786 ORTHO05D004375 6.5e-60 235.3 223 52.9
Migut.D02178 Erythranthe guttata HOM05D003786 ORTHO05D004375 6.5e-60 235.3 241 53.5
Gohir.A13G003000 Gossypium hirsutum HOM05D003786 ORTHO05D004375 6.5e-60 235.3 223 54.7
DCAR_006378 Daucus carota HOM05D003786 ORTHO05D004375 8.4e-60 235.0 223 55.6
vmacro03165 Vaccinium macrocarpon HOM05D003786 ORTHO05D004375 8.4e-60 235.0 224 54.5
DCAR_006383 Daucus carota HOM05D003786 ORTHO05D004375 1.4e-59 234.2 233 54.9
ClCG02G020870 Citrullus lanatus HOM05D003786 ORTHO05D004375 1.9e-59 233.8 224 55.4
Migut.I00230 Erythranthe guttata HOM05D003786 ORTHO05D004375 2.5e-59 233.4 237 54.4
Thecc.09G261300 Theobroma cacao HOM05D003786 ORTHO05D004375 2.5e-59 233.4 223 52.5
CsaV3_6G021540 Cucumis sativus L. HOM05D003786 ORTHO05D004375 4.2e-59 232.6 226 54.4
CSS0041475 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 5.5e-59 232.3 223 53.8
Ciclev10029956m.g Citrus clementina HOM05D003786 ORTHO05D004375 7.1e-59 231.9 223 54.3
Actinidia09138 Actinidia chinensis HOM05D003786 ORTHO05D004375 9.3e-59 231.5 220 54.5
MSTRG.858 Avicennia marina HOM05D003786 ORTHO05D004375 2.1e-58 230.3 234 50.9
Atru.chr3.3714 Acer truncatum HOM05D003786 ORTHO05D004375 2.7e-58 229.9 223 53.8
Cpa.g.sc318.5 Carica papaya HOM05D003786 ORTHO05D004375 3.5e-58 229.6 223 55.2
SalBow3G3536 Salvia bowleyana HOM05D003786 ORTHO05D004375 3.5e-58 229.6 225 53.3
TWI75G0263 Tripterygium wilfordii HOM05D003786 ORTHO05D004375 7.9e-58 228.4 223 55.2
Cc00_g24070 Coffea canephora HOM05D003786 ORTHO05D004375 1.0e-57 228.0 236 53.0
Sabra09G0101900 Salix brachista HOM05D003786 ORTHO05D004375 1.8e-57 227.3 221 55.2
Lj2P1038T21 Lonicera japonica HOM05D003786 ORTHO05D004375 3.9e-57 226.1 224 54.9
Potri.009G131500 Populus trichocarpa HOM05D003786 ORTHO05D004375 3.9e-57 226.1 220 55.0
Nitab4.5_0000106g0010 Nicotiana tabacum HOM05D003786 ORTHO05D004375 6.7e-57 225.3 224 53.6
Rhsim13G0091500 Rhododendron simsii HOM05D003786 ORTHO05D004375 6.7e-57 225.3 256 48.8
Sabra09G0099700 Salix brachista HOM05D003786 ORTHO05D004375 8.7e-57 224.9 221 55.2
Sc06g0010590 Simmondsia chinensis HOM05D003786 ORTHO05D004375 1.1e-56 224.6 233 51.5
CAN.G1001.9 Capsicum annuum HOM05D003786 ORTHO05D004375 1.9e-56 223.8 221 53.4
Eucgr.J01130 Eucalyptus grandis HOM05D003786 ORTHO05D004375 2.5e-56 223.4 225 50.7
Manes.04G025700 Manihot esculenta HOM05D003786 ORTHO05D004375 2.5e-56 223.4 253 50.2
CANSAT54G0858 Cannabis sativa HOM05D003786 ORTHO05D004375 3.3e-56 223.0 227 53.3
HanXRQChr12g0373371 Helianthus annuus HOM05D003786 ORTHO05D004375 3.3e-56 223.0 228 51.8
CAN.G1001.22 Capsicum annuum HOM05D003786 ORTHO05D004375 7.4e-56 221.9 223 52.0
Prupe.6G093000 Prunus persica HOM05D003786 ORTHO05D004375 9.7e-56 221.5 233 52.4
Nitab4.5_0001421g0060 Nicotiana tabacum HOM05D003786 ORTHO05D004375 2.2e-55 220.3 219 53.4
Sed0001350 Sechium edule HOM05D003786 ORTHO05D004375 2.2e-55 220.3 224 54.5
Nitab4.5_0005175g0010 Nicotiana tabacum HOM05D003786 ORTHO05D004375 2.8e-55 219.9 223 52.0
CSS0017411 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 3.7e-55 219.5 224 53.1
Migut.I00232 Erythranthe guttata HOM05D003786 ORTHO05D004375 3.7e-55 219.5 211 54.5
CiPaw.14G077400 Carya illinoinensis HOM05D003786 ORTHO05D004375 6.3e-55 218.8 223 52.0
PGR102G2306 Punica granatum HOM05D003786 ORTHO05D004375 6.3e-55 218.8 232 53.4
Sopen06g031770 Solanum pennellii HOM05D003786 ORTHO05D004375 6.3e-55 218.8 223 51.1
PGSC0003DMG400007497 Solanum tuberosum HOM05D003786 ORTHO05D004375 6.3e-55 218.8 223 52.0
QL01p036748 Quercus lobata HOM05D003786 ORTHO05D004375 8.2e-55 218.4 223 52.0
Solyc06g075350.3 Solanum lycopersicum HOM05D003786 ORTHO05D004375 1.4e-54 217.6 223 50.7
Haze_23937 Corylus avellana HOM05D003786 ORTHO05D004375 3.1e-54 216.5 244 50.4
ATR0763G039 Amborella trichopoda HOM05D003786 ORTHO05D004375 4.1e-54 216.1 235 51.1
Actinidia03750 Actinidia chinensis HOM05D003786 ORTHO05D004375 5.3e-54 215.7 224 50.0
Peaxi162Scf00072g00045 Petunia axillaris HOM05D003786 ORTHO05D004375 6.9e-54 215.3 223 50.7
FAN14G4371 Fragaria x ananassa HOM05D003786 ORTHO05D008187 1.2e-53 214.5 222 53.2
FvH4_6g01503 Fragaria vesca HOM05D003786 ORTHO05D004375 1.5e-53 214.2 222 53.6
CDE05G0279 Ceratophyllum demersum HOM05D003786 ORTHO05D004375 3.4e-53 213.0 228 50.4
A10p17360 Brassica napus HOM05D003786 ORTHO05D004375 5.9e-53 212.2 276 46.4
Haze_20932 Corylus avellana HOM05D003786 ORTHO05D004375 5.9e-53 212.2 244 50.0
MELO3C025739.2 Cucumis melo HOM05D003786 ORTHO05D004375 5.9e-53 212.2 205 53.7
Nn2g10664 Nelumbo nucifera HOM05D003786 ORTHO05D004375 7.7e-53 211.8 224 51.3
RcHm_v2.0_Chr3g0449171 Rosa chinensis HOM05D003786 ORTHO05D004375 7.7e-53 211.8 224 52.7
SHI14981 Sapria himalayana HOM05D003786 ORTHO05D004375 2.2e-52 210.3 226 49.6
PGSC0003DMG401003373 Solanum tuberosum HOM05D003786 ORTHO05D004375 2.2e-52 210.3 224 49.6
PGSC0003DMG402003373 Solanum tuberosum HOM05D003786 ORTHO05D004375 2.2e-52 210.3 224 49.6
BolC3t13758H Brassica oleracea HOM05D003786 ORTHO05D004375 2.9e-52 209.9 252 47.6
AL8G36840 Arabidopsis lyrata HOM05D003786 ORTHO05D004375 3.8e-52 209.5 221 52.5
Migut.I00240 Erythranthe guttata HOM05D003786 ORTHO05D004375 3.8e-52 209.5 211 53.6
FAN14G4130 Fragaria x ananassa HOM05D003786 ORTHO05D004375 6.5e-52 208.8 223 52.0
Sp6g21860 Schrenkiella parvula HOM05D003786 ORTHO05D004375 6.5e-52 208.8 221 52.9
THA.LOC104810009 Tarenaya hassleriana HOM05D003786 ORTHO05D004375 6.5e-52 208.8 224 50.0
FAN02G2859 Fragaria x ananassa HOM05D003786 ORTHO05D004375 8.5e-52 208.4 223 52.0
FAN05G3511 Fragaria x ananassa HOM05D003786 ORTHO05D008187 8.5e-52 208.4 223 50.7
Phvul.001G137825 Phaseolus vulgaris HOM05D003786 ORTHO05D004375 8.5e-52 208.4 230 50.9
Phvul.001G138100 Phaseolus vulgaris HOM05D003786 ORTHO05D004375 8.5e-52 208.4 230 50.9
VMungo1127G2311 Vigna mungo HOM05D003786 ORTHO05D004375 8.5e-52 208.4 230 52.6
Aa31LG5G20880 Aethionema arabicum HOM05D003786 ORTHO05D004375 1.4e-51 207.6 221 50.7
MBI03_g28482_MAGBIO Magnolia biondii HOM05D003786 ORTHO05D004375 1.9e-51 207.2 221 48.9
Psat3g070480 Pisum sativum HOM05D003786 ORTHO05D004375 1.9e-51 207.2 231 49.4
Lsat_1_v5_gn_2_25701 Lactuca sativa HOM05D003786 ORTHO05D004375 2.5e-51 206.8 229 47.6
FAN05G4299 Fragaria x ananassa HOM05D003786 ORTHO05D004375 4.2e-51 206.1 223 52.0
BcaB01g04647 Brassica carinata HOM05D003786 ORTHO05D004375 5.5e-51 205.7 252 48.0
BraA10t43819Z Brassica rapa HOM05D003786 ORTHO05D004375 5.5e-51 205.7 278 45.3
Thhalv10015366m.g Eutrema salsugineum HOM05D003786 ORTHO05D004375 7.2e-51 205.3 221 52.0
MBI04_g27239_MAGBIO Magnolia biondii HOM05D003786 ORTHO05D004375 7.2e-51 205.3 221 48.9
FAN05G1554 Fragaria x ananassa HOM05D003786 ORTHO05D008187 1.2e-50 204.5 223 51.6
Carub.0008s2097 Capsella rubella HOM05D003786 ORTHO05D004375 1.6e-50 204.1 200 54.0
Carub.0005s1880 Capsella rubella HOM05D003786 ORTHO05D004375 2.1e-50 203.8 221 52.5
unitig_736.g22421 Utricularia gibba HOM05D003786 ORTHO05D004375 2.1e-50 203.8 237 49.4
AT5G60230 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 3.6e-50 203.0 200 53.5
A03p11270 Brassica napus HOM05D003786 ORTHO05D004375 3.6e-50 203.0 221 50.2
BraA03t10439Z Brassica rapa HOM05D003786 ORTHO05D004375 3.6e-50 203.0 221 50.2
Aa31LG4G14750 Aethionema arabicum HOM05D003786 ORTHO05D004375 4.6e-50 202.6 221 48.4
HanXRQChr01g0022711 Helianthus annuus HOM05D003786 ORTHO05D004375 4.6e-50 202.6 228 49.6
Ah.12g063340 Amaranthus hybridus HOM05D003786 ORTHO05D004375 1.4e-49 201.1 245 47.3
arahy.Tifrunner.gnm1.ann1.2E7PU8 Arachis hypogaea HOM05D003786 ORTHO05D004375 1.4e-49 201.1 231 49.4
Migut.I00250 Erythranthe guttata HOM05D003786 ORTHO05D004375 1.4e-49 201.1 239 49.8
TPR.G28524 Trifolium pratense HOM05D003786 ORTHO05D004375 1.4e-49 201.1 231 48.9
ECA238G1499 Erigeron canadensis HOM05D003786 ORTHO05D004375 5.1e-49 199.1 241 46.9
GSVIVG01025123001 Vitis vinifera HOM05D003786 ORTHO05D004375 5.1e-49 199.1 219 50.2
Lalb_Chr25g0287531 Lupinus albus HOM05D003786 ORTHO05D004375 6.7e-49 198.7 240 48.8
C09p52700 Brassica napus HOM05D003786 ORTHO05D004375 8.8e-49 198.4 277 45.1
BolC9t58138H Brassica oleracea HOM05D003786 ORTHO05D004375 8.8e-49 198.4 277 45.1
AUR62042700 Chenopodium quinoa HOM05D003786 ORTHO05D004375 8.8e-49 198.4 233 47.6
AUR62044767 Chenopodium quinoa HOM05D003786 ORTHO05D004375 8.8e-49 198.4 233 47.6
Gorai.013G255400 Gossypium raimondii HOM05D003786 ORTHO05D004375 1.1e-48 198.0 223 50.7
Aqoxy2G03481_Aqoxy2G03482 Aquilegia oxysepala HOM05D003786 ORTHO05D004375 1.5e-48 197.6 225 48.4
arahy.Tifrunner.gnm1.ann1.XC8HKJ Arachis hypogaea HOM05D003786 ORTHO05D004375 1.5e-48 197.6 216 50.5
Lj1g0003252 Lotus japonicus HOM05D003786 ORTHO05D004375 1.5e-48 197.6 230 47.8
MD11G1123700 Malus domestica HOM05D003786 ORTHO05D004375 1.5e-48 197.6 205 52.2
Aqoxy6G02754 Aquilegia oxysepala HOM05D003786 ORTHO05D004375 2.0e-48 197.2 224 50.0
AUR62040193 Chenopodium quinoa HOM05D003786 ORTHO05D004375 2.0e-48 197.2 233 46.8
TPR.G4813 Trifolium pratense HOM05D003786 ORTHO05D004375 2.0e-48 197.2 231 48.9
Glyma.04G189200 Glycine max HOM05D003786 ORTHO05D004375 3.3e-48 196.4 232 49.1
Gohir.D13G224600 Gossypium hirsutum HOM05D003786 ORTHO05D004375 3.3e-48 196.4 223 50.2
THA.LOC104799484 Tarenaya hassleriana HOM05D003786 ORTHO05D004375 3.3e-48 196.4 225 47.6
SGA_v2.0_scaffold97G29166 Striga asiatica HOM05D003786 ORTHO05D004375 4.3e-48 196.1 222 48.6
ECA233G5822 Erigeron canadensis HOM05D007880 ORTHO05D003386 5.7e-48 195.7 239 46.4
Glyma.10G072100 Glycine max HOM05D003786 ORTHO05D004375 7.4e-48 195.3 232 49.1
Lsat_1_v5_gn_6_69540 Lactuca sativa HOM05D003786 ORTHO05D004375 9.7e-48 194.9 238 47.5
Psat6g109040 Pisum sativum HOM05D003786 ORTHO05D004375 1.7e-47 194.1 325 41.2
EL10Ac6g14823 Beta vulgaris HOM05D003786 ORTHO05D004375 4.8e-47 192.6 233 44.6
Ca_08491_v3 Cicer arietinum L. HOM05D003786 ORTHO05D004375 4.8e-47 192.6 232 47.4
Ca_30036_v3 Cicer arietinum L. HOM05D003786 ORTHO05D004375 4.8e-47 192.6 232 47.4
Ah.08g211230 Amaranthus hybridus HOM05D003786 ORTHO05D004375 8.2e-47 191.8 245 46.1
AT3G45590 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 1.1e-46 191.4 203 50.7
AL5G24200 Arabidopsis lyrata HOM05D003786 ORTHO05D004375 2.4e-46 190.3 222 50.0
AUR62039602 Chenopodium quinoa HOM05D003786 ORTHO05D004375 4.1e-46 189.5 219 47.5
Medtr7g092500 Medicago truncatula HOM05D003786 ORTHO05D004375 9.1e-46 188.3 233 46.4
HPP92_017618 Vanilla planifolia HOM05D003786 ORTHO05D004375 1.5e-45 187.6 257 42.0
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 2.0e-45 187.2 229 47.2
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 2.0e-45 187.2 229 47.2
SGA_v2.0_scaffold32G12943 Striga asiatica HOM05D003786 ORTHO05D004375 2.0e-45 187.2 226 46.5
AUR62019620 Chenopodium quinoa HOM05D003786 ORTHO05D004375 4.5e-45 186.0 225 46.2
SEGI_12201 Sequoiadendron giganteum HOM05D003786 ORTHO05D004375 2.2e-44 183.7 244 45.5
Oeu022264.1 Olea europaea HOM05D003786 ORTHO05D004375 3.8e-44 183.0 220 48.2
Nitab4.5_0005175g0020 Nicotiana tabacum HOM05D003786 ORTHO05D004375 1.9e-43 180.6 170 52.4
Oeu012677.3 Olea europaea HOM05D003786 ORTHO05D004375 7.2e-43 178.7 229 45.4
C03p12960 Brassica napus HOM05D003786 ORTHO05D004375 6.1e-42 175.6 224 45.5
RcHm_v2.0_Chr5g0061031 Rosa chinensis HOM05D003786 ORTHO05D004375 5.1e-41 172.6 212 49.5
Peaxi162Scf00272g00092 Petunia axillaris HOM05D003786 ORTHO05D004375 6.7e-41 172.2 223 45.3
Os11g0602400 Oryza sativa ssp. japonica HOM05D003786 ORTHO05D004375 3.3e-40 169.9 237 41.8
Zm00001eb228610 Zea mays HOM05D003786 ORTHO05D004375 3.3e-40 169.9 239 43.9
BolC3t13761H Brassica oleracea HOM05D003786 ORTHO05D004375 9.7e-40 168.3 167 52.1
Sabra09G0100500 Salix brachista HOM05D003786 ORTHO05D004375 1.1e-38 164.9 221 45.2
TAR623G0784 Trochodendron aralioides HOM05D003786 ORTHO05D004375 1.8e-38 164.1 141 57.4
Thhalv10002801m.g Eutrema salsugineum HOM05D003786 ORTHO05D004375 5.3e-38 162.5 208 45.2
MD11G1124300 Malus domestica HOM05D003786 ORTHO05D004375 9.1e-38 161.8 147 55.8
BcaB08g36317 Brassica carinata HOM05D003786 ORTHO05D004375 2.6e-37 160.2 267 42.3
Medtr0262s0030 Medicago truncatula HOM05D003786 ORTHO05D004375 2.2e-36 157.1 173 49.1
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 3.8e-36 156.4 193 45.6
Mapoly0072s0108 Marchantia polymorpha HOM05D003786 ORTHO05D004375 2.5e-35 153.7 271 35.8
Migut.I00236 Erythranthe guttata HOM05D003786 ORTHO05D004375 2.7e-34 150.2 233 42.5
VMungo0563G0001 Vigna mungo HOM05D003786 ORTHO05D004375 1.5e-32 144.4 206 43.7
Nitab4.5_0021870g0020 Nicotiana tabacum HOM05D003786 ORTHO05D004375 4.8e-31 139.4 168 45.2
Nitab4.5_0000888g0190 Nicotiana tabacum HOM05D003786 ORTHO05D004375 1.1e-30 138.3 203 41.9
Pp3c27_2720 Physcomitrium patens HOM05D003786 ORTHO05D004375 1.6e-29 134.4 226 34.5
Migut.I00245 Erythranthe guttata HOM05D003786 ORTHO05D004375 3.0e-25 120.2 187 40.1
Potri.014G083401 Populus trichocarpa HOM05D003786 ORTHO05D004375 7.0e-22 109.0 92 59.8
ECA246G5003 Erigeron canadensis HOM05D003786 ORTHO05D004375 1.6e-21 107.8 112 50.0
Migut.I00242 Erythranthe guttata HOM05D003786 ORTHO05D004375 1.7e-20 104.4 110 49.1
Gohir.A13G220600 Gossypium hirsutum HOM05D003786 ORTHO05D004375 2.9e-20 103.6 96 56.2
Lj1g0020830 Lotus japonicus HOM05D003786 ORTHO05D004375 5.0e-20 102.8 138 43.5
Glyma.19G143800 Glycine max HOM05D003786 ORTHO05D004375 2.7e-18 97.1 111 49.5
CBR_g44920 Chara braunii HOM05D003786 ORTHO05D004375 1.8e-17 94.4 133 38.3
Peaxi162Scf00389g00065 Petunia axillaris HOM05D003786 ORTHO05D004375 1.5e-16 91.3 121 42.1
CARHR150050 Cardamine hirsuta HOM05D003786 ORTHO05D004375 2.0e-16 90.9 119 44.5
TAR376G1065 Trochodendron aralioides HOM05D000267 ORTHO05D004375 9.8e-16 88.6 125 42.4
SGA_v2.0_scaffold146G36226 Striga asiatica HOM05D003786 ORTHO05D004375 1.1e-14 85.1 79 46.8
Lsat_1_v5_gn_2_25281 Lactuca sativa HOM05D003786 ORTHO05D004375 2.3e-12 77.4 72 54.2
BcaC04g19667 Brassica carinata HOM05D000666 ORTHO05D001727 5.6e-11 72.8 92 48.9
PRCOL_00003701 Prasinoderma coloniale HOM05D003786 ORTHO05D004375 5.6e-11 72.8 158 27.2
AT3G45577 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 3.0e-09 67.0 101 40.6
CARHR273910 Cardamine hirsuta HOM05D003786 ORTHO05D004375 6.8e-09 65.9 83 48.2


User provided reference genes

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